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Contents |
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344 a.a.
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339 a.a.
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54 a.a.
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* Residue conservation analysis
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PDB id:
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| Name: |
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Complex (gtp-binding/transducer)
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Title:
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G protein heterotrimer mutant gi_alpha_1(g203a) beta_1 gamma_2 with gdp bound
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Structure:
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G protein gi alpha 1. Chain: a. Fragment: alpha 1. Engineered: yes. Mutation: yes. G protein gi beta 1. Chain: b. Fragment: beta 1. Engineered: yes.
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Source:
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Rattus norvegicus. Norway rat. Organism_taxid: 10116. Cell_line: sf9. Expressed in: escherichia coli. Expression_system_taxid: 562. Bos taurus. Cattle. Organism_taxid: 9913.
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Biol. unit:
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Trimer (from
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Resolution:
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2.40Å
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R-factor:
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0.205
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R-free:
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0.289
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Authors:
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M.A.Wall,S.R.Sprang
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Key ref:
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M.A.Wall
et al.
(1995).
The structure of the G protein heterotrimer Gi alpha 1 beta 1 gamma 2.
Cell,
83,
1047-1058.
PubMed id:
DOI:
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Date:
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13-Nov-96
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Release date:
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12-Feb-97
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PROCHECK
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Headers
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References
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P10824
(GNAI1_RAT) -
Guanine nucleotide-binding protein G(i) subunit alpha-1
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Seq: Struc:
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354 a.a.
344 a.a.*
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Gene Ontology (GO) functional annotation
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Cellular component
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membrane
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14 terms
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Biological process
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cell cycle
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11 terms
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Biochemical function
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nucleotide binding
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10 terms
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DOI no:
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Cell
83:1047-1058
(1995)
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PubMed id:
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The structure of the G protein heterotrimer Gi alpha 1 beta 1 gamma 2.
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M.A.Wall,
D.E.Coleman,
E.Lee,
J.A.Iñiguez-Lluhi,
B.A.Posner,
A.G.Gilman,
S.R.Sprang.
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ABSTRACT
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The crystallographic structure of the G protein heterotrimer Gi alpha 1(GDP)beta
1 gamma 2 (at 2.3 A) reveals two nonoverlapping regions of contact between alpha
and beta, an extended interface between beta and nearly all of gamma, and
limited interaction of alpha with gamma. The major alpha/beta interface covers
switch II of alpha, and GTP-induced rearrangement of switch II causes subunit
dissociation during signaling. Alterations in GDP binding in the heterotrimer
(compared with alpha-GDP) explain stabilization of the inactive conformation of
alpha by beta gamma. Repeated WD motifs in beta form a circularized sevenfold
beta propeller. The conserved cores of these motifs are a scaffold for display
of their more variable linkers on the exterior face of each propeller blade.
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Literature references that cite this PDB file's key reference
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| |
PubMed id
|
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Reference
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|
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|
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C.Xu,
and
J.Min
(2011).
Structure and function of WD40 domain proteins.
|
| |
Protein Cell, 2,
202-214.
|
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|
PDB codes:
|
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|
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|
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L.M.Simpson,
I.D.Wall,
F.E.Blaney,
and
C.A.Reynolds
(2011).
Modeling GPCR active state conformations: The β(2) -adrenergic receptor.
|
| |
Proteins, 79,
1441-1457.
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|
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|
|
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M.S.Park,
A.V.Smrcka,
and
H.A.Stern
(2011).
Conformational flexibility and binding interactions of the G protein βγ heterodimer.
|
| |
Proteins, 79,
518-527.
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|
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A.Nishimura,
K.Kitano,
J.Takasaki,
M.Taniguchi,
N.Mizuno,
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T.Hakoshima,
and
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(2010).
Structural basis for the specific inhibition of heterotrimeric Gq protein by a small molecule.
|
| |
Proc Natl Acad Sci U S A, 107,
13666-13671.
|
 |
|
PDB code:
|
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|
|
|
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|
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A.Strasser,
and
H.J.Wittmann
(2010).
Distinct interactions between the human adrenergic beta(2) receptor and Galpha(s)--an in silico study.
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| |
J Mol Model, 16,
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H.A.Stern,
B.M.Willardson,
and
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(2010).
NMR analysis of G-protein betagamma subunit complexes reveals a dynamic G(alpha)-Gbetagamma subunit interface and multiple protein recognition modes.
|
| |
Proc Natl Acad Sci U S A, 107,
639-644.
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Evolution of a signaling nexus constrained by protein interfaces and conformational States.
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| |
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WD40 proteins propel cellular networks.
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and
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(2010).
Binding of different histone marks differentially regulates the activity and specificity of polycomb repressive complex 2 (PRC2).
|
| |
Proc Natl Acad Sci U S A, 107,
19266-19271.
|
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PDB codes:
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|
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J.J.Tesmer
(2010).
The quest to understand heterotrimeric G protein signaling.
|
| |
Nat Struct Mol Biol, 17,
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Solution structure of the human signaling protein RACK1.
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Superactive mutants of thromboxane prostanoid receptor: functional and computational analysis of an active form alternative to constitutively active mutants.
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and
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The beta subunit of the heterotrimeric G protein triggers the Kluyveromyces lactis pheromone response pathway in the absence of the gamma subunit.
|
| |
Mol Biol Cell, 21,
489-498.
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and
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(2010).
Is Asp-His-Ser/Thr-Trp tetrad hydrogen-bond network important to WD40-repeat proteins: a statistical and theoretical study.
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| |
Proteins, 78,
1186-1194.
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A.Faussner,
G.Wennerberg,
S.Schüssler,
J.Feierler,
C.Seidl,
M.Jochum,
and
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(2009).
Alanine screening of the intracellular loops of the human bradykinin B receptor--effects on receptor maintenance, G protein activation and internalization.
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| |
FEBS J, 276,
3491-3503.
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|
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A.Guilfoyle,
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M.Rapp,
R.Clarke,
S.Harrop,
and
M.Jormakka
(2009).
Structural basis of GDP release and gating in G protein coupled Fe2+ transport.
|
| |
EMBO J, 28,
2677-2685.
|
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|
PDB codes:
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D.J.Dupré,
M.Robitaille,
R.V.Rebois,
and
T.E.Hébert
(2009).
The role of Gbetagamma subunits in the organization, assembly, and function of GPCR signaling complexes.
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| |
Annu Rev Pharmacol Toxicol, 49,
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and
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(2009).
The R7 RGS protein family: multi-subunit regulators of neuronal G protein signaling.
|
| |
Cell Biochem Biophys, 54,
33-46.
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|
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H.E.Hamm,
S.M.Meier,
G.Liao,
and
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(2009).
Trp fluorescence reveals an activation-dependent cation-pi interaction in the Switch II region of Galphai proteins.
|
| |
Protein Sci, 18,
2326-2335.
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|
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P.Sengupta,
Y.Guo,
U.Golebiewska,
and
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(2009).
Evidence for a Second, High Affinity G{beta}{gamma} Binding Site on G{alpha}i1(GDP) Subunits.
|
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J Biol Chem, 284,
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U.Golebiewska,
and
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A self-scaffolding model for G protein signaling.
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92.
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K.Khafizov
(2009).
GoLoco motif proteins binding to Galpha(i1): insights from molecular simulations.
|
| |
J Mol Model, 15,
1491-1499.
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M.Garcia-Marcos,
P.Ghosh,
and
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(2009).
GIV is a nonreceptor GEF for G alpha i with a unique motif that regulates Akt signaling.
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Proc Natl Acad Sci U S A, 106,
3178-3183.
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R.Prasobh,
and
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(2009).
The repertoire of heterotrimeric G proteins and RGS proteins in Ciona intestinalis.
|
| |
PLoS One, 4,
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|
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R.Sadana,
N.Dascal,
and
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N terminus of type 5 adenylyl cyclase scaffolds Gs heterotrimer.
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1256-1264.
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K.T.Nguyen,
S.V.Le Clair,
and
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(2009).
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| |
J Struct Biol, 168,
61-77.
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W.E.McIntire
(2009).
Structural determinants involved in the formation and activation of G protein betagamma dimers.
|
| |
Neurosignals, 17,
82-99.
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P.L.Wintrode,
and
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(2008).
Different properties of the native and reconstituted heterotrimeric G protein transducin.
|
| |
Biochemistry, 47,
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and
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(2008).
Receptor-mediated changes at the myristoylated amino terminus of Galpha(il) proteins.
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Biochemistry, 47,
10281-10293.
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|
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A.R.Zurita,
and
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(2008).
The same mutation in Gsalpha and transducin alpha reveals behavioral differences between these highly homologous G protein alpha-subunits.
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| |
Proc Natl Acad Sci U S A, 105,
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A.V.Smrcka
(2008).
G protein betagamma subunits: central mediators of G protein-coupled receptor signaling.
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| |
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D.M.Lehmann,
and
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G protein betagamma subunits as targets for small molecule therapeutic development.
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| |
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W.Saengsawang,
R.J.Donati,
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D.C.Mulhearn,
M.E.Johnson,
and
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(2008).
Structural model of a complex between the heterotrimeric G protein, Gsalpha, and tubulin.
|
| |
Biochim Biophys Acta, 1783,
964-973.
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F.S.Willard,
J.K.Ramer,
R.Blaesius,
C.N.Roques,
and
D.P.Siderovski
(2008).
State-selective binding peptides for heterotrimeric G-protein subunits: novel tools for investigating G-protein signaling dynamics.
|
| |
Comb Chem High Throughput Screen, 11,
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|
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C.J.Thomas,
G.G.Tall,
A.Adhikari,
and
S.R.Sprang
(2008).
Ric-8A Catalyzes Guanine Nucleotide Exchange on G{alpha}i1 Bound to the GPR/GoLoco Exchange Inhibitor AGS3.
|
| |
J Biol Chem, 283,
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|
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D.Rakotobe,
S.Violot,
S.S.Hong,
P.Gouet,
and
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(2008).
Mapping of immunogenic and protein-interacting regions at the surface of the seven-bladed beta-propeller domain of the HIV-1 cellular interactor EED.
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S.R.Ikeda,
Q.Du,
and
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(2008).
A point mutation to Galphai selectively blocks GoLoco motif binding: direct evidence for Galpha.GoLoco complexes in mitotic spindle dynamics.
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| |
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|
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(2008).
Structure of a signal transduction regulator, RACK1, from Arabidopsis thaliana.
|
| |
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|
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PDB code:
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|
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| |
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| |
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| |
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| |
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T.Suganuma,
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|
| |
Genes Dev, 22,
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|
| |
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|
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and
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(2008).
Heterotrimeric G protein activation by G-protein-coupled receptors.
|
| |
Nat Rev Mol Cell Biol, 9,
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|
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P.Zhang,
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and
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(2008).
Structure of a protein phosphatase 2A holoenzyme: insights into B55-mediated Tau dephosphorylation.
|
| |
Mol Cell, 31,
873-885.
|
 |
|
PDB code:
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|
|
 |
A.F.Neuwald
(2007).
Galpha Gbetagamma dissociation may be due to retraction of a buried lysine and disruption of an aromatic cluster by a GTP-sensing Arg Trp pair.
|
| |
Protein Sci, 16,
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|
|
|
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A.V.Andreeva,
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(2007).
Scaffolding proteins in G-protein signaling.
|
| |
J Mol Signal, 2,
13.
|
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|
|
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E.N.Nikolov,
and
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(2007).
Dynamic integration of alpha-adrenergic and cholinergic signals in the atria: role of G protein-regulated inwardly rectifying K+ channels.
|
| |
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|
| |
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|
|
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and
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