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protein Protein-protein interface(s) links
Chaperone PDB id
1fpo
Jmol
Contents
Protein chains
171 a.a. *
157 a.a. *
Waters ×449
* Residue conservation analysis
PDB id:
1fpo
Name: Chaperone
Title: Hsc20 (hscb), a j-type co-chaperone from e. Coli
Structure: Chaperone protein hscb. Chain: a, b, c. Synonym: hsc20. Engineered: yes. Mutation: yes
Source: Escherichia coli. Organism_taxid: 562. Expressed in: escherichia coli. Expression_system_taxid: 562.
Biol. unit: Hexamer (from PQS)
Resolution:
1.80Å     R-factor:   0.216     R-free:   0.246
Authors: J.R.Cupp-Vickery,L.E.Vickery
Key ref: J.R.Cupp-Vickery and L.E.Vickery (2000). Crystal structure of Hsc20, a J-type Co-chaperone from Escherichia coli. J Mol Biol, 304, 835-845. PubMed id: 11124030 DOI: 10.1006/jmbi.2000.4252
Date:
31-Aug-00     Release date:   08-Dec-00    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P0A6L9  (HSCB_ECOLI) -  Co-chaperone protein hscB
Seq:
Struc:
171 a.a.
171 a.a.*
Protein chain
Pfam   ArchSchema ?
P0A6L9  (HSCB_ECOLI) -  Co-chaperone protein hscB
Seq:
Struc:
171 a.a.
157 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 2 residue positions (black crosses)

 Gene Ontology (GO) functional annotation 
  GO annot!
  Biological process     protein folding   1 term 
  Biochemical function     protein binding     3 terms  

 

 
DOI no: 10.1006/jmbi.2000.4252 J Mol Biol 304:835-845 (2000)
PubMed id: 11124030  
 
 
Crystal structure of Hsc20, a J-type Co-chaperone from Escherichia coli.
J.R.Cupp-Vickery, L.E.Vickery.
 
  ABSTRACT  
 
Hsc20 is a 20 kDa J-protein that regulates the ATPase activity and peptide-binding specificity of Hsc66, an hsp70-class molecular chaperone. We report herein the crystal structure of Hsc20 from Escherichia coli determined to a resolution of 1.8 A using a combination of single isomorphous replacement (SIR) and multi-wavelength anomalous diffraction (MAD). The overall structure of Hsc20 consists of two distinct domains, an N-terminal J-domain containing residues 1-75 connected by a short loop to a C-terminal domain containing residues 84-171. The structure of the J-domain, involved in interactions with Hsc66, resembles the alpha-topology of J-domain fragments of Escherichia coli DnaJ and human Hdj1 previously determined by solution NMR methods. The C-terminal domain, implicated in binding and targeting proteins to Hsc66, consists of a three-helix bundle in which two helices comprise an anti-parallel coiled-coil. The two domains make contact through an extensive hydrophobic interface ( approximately 650 A(2)) suggesting that their relative orientations are fixed. Thus, Hsc20, in addition to its role in the regulation of the ATPase activity of Hsc66, may also function as a rigid scaffold to facilitate positioning of the protein substrates targeted to Hsc66.
 

Literature references that cite this PDB file's key reference

  PubMed id Reference
21269500 A.K.Füzéry, J.J.Oh, D.T.Ta, L.E.Vickery, and J.L.Markley (2011).
Three hydrophobic amino acids in Escherichia coli HscB make the greatest contribution to the stability of the HscB-IscU complex.
  BMC Biochem, 12, 3.  
20651708 H.H.Kampinga, and E.A.Craig (2010).
The HSP70 chaperone machinery: J proteins as drivers of functional specificity.
  Nat Rev Mol Cell Biol, 11, 579-592.  
20668094 H.Uhrigshardt, A.Singh, G.Kovtunovych, M.Ghosh, and T.A.Rouault (2010).
Characterization of the human HSC20, an unusual DnaJ type III protein, involved in iron-sulfur cluster biogenesis.
  Hum Mol Genet, 19, 3816-3834.  
20481466 H.Ye, and T.A.Rouault (2010).
Human iron-sulfur cluster assembly, cellular iron homeostasis, and disease.
  Biochemistry, 49, 4945-4956.  
20101433 S.Fiedler, J.Broecker, and S.Keller (2010).
Protein folding in membranes.
  Cell Mol Life Sci, 67, 1779-1798.  
19519518 J.Li, X.Qian, and B.Sha (2009).
Heat shock protein 40: structural studies and their functional implications.
  Protein Pept Lett, 16, 606-612.  
18702525 A.K.Füzéry, M.Tonelli, D.T.Ta, G.Cornilescu, L.E.Vickery, and J.L.Markley (2008).
Solution structure of the iron-sulfur cluster cochaperone HscB and its binding surface for the iron-sulfur assembly scaffold protein IscU.
  Biochemistry, 47, 9394-9404.  
18713742 E.Bitto, C.A.Bingman, L.Bittova, D.A.Kondrashov, R.M.Bannen, B.G.Fox, J.L.Markley, and G.N.Phillips (2008).
Structure of Human J-type Co-chaperone HscB Reveals a Tetracysteine Metal-binding Domain.
  J Biol Chem, 283, 30184-30192.
PDB code: 3bvo
17919282 P.Genevaux, C.Georgopoulos, and W.L.Kelley (2007).
The Hsp70 chaperone machines of Escherichia coli: a paradigm for the repartition of chaperone functions.
  Mol Microbiol, 66, 840-857.  
17239655 W.S.Nicoll, M.Botha, C.McNamara, M.Schlange, E.R.Pesce, A.Boshoff, M.H.Ludewig, R.Zimmermann, M.E.Cheetham, J.P.Chapple, and G.L.Blatch (2007).
Cytosolic and ER J-domains of mammalian and parasitic origin can functionally interact with DnaK.
  Int J Biochem Cell Biol, 39, 736-751.  
16551614 A.J.Andrew, R.Dutkiewicz, H.Knieszner, E.A.Craig, and J.Marszalek (2006).
Characterization of the interaction between the J-protein Jac1p and the scaffold for Fe-S cluster biogenesis, Isu1p.
  J Biol Chem, 281, 14580-14587.  
15952888 D.C.Johnson, D.R.Dean, A.D.Smith, and M.K.Johnson (2005).
Structure, function, and formation of biological iron-sulfur clusters.
  Annu Rev Biochem, 74, 247-281.  
15987899 F.Hennessy, W.S.Nicoll, R.Zimmermann, M.E.Cheetham, and G.L.Blatch (2005).
Not all J domains are created equal: implications for the specificity of Hsp40-Hsp70 interactions.
  Protein Sci, 14, 1697-1709.  
16014958 K.A.Whalen, R.de Jesus, J.A.Kean, and B.S.Schaffhausen (2005).
Genetic analysis of the polyomavirus DnaJ domain.
  J Virol, 79, 9982-9990.  
15937904 Y.Shimomura, Y.Takahashi, Y.Kakuta, and K.Fukuyama (2005).
Crystal structure of Escherichia coli YfhJ protein, a member of the ISC machinery involved in assembly of iron-sulfur clusters.
  Proteins, 60, 566-569.
PDB code: 1uj8
15457434 D.A.Lindhout, J.R.Litowski, P.Mercier, R.S.Hodges, and B.D.Sykes (2004).
NMR solution structure of a highly stable de novo heterodimeric coiled-coil.
  Biopolymers, 75, 367-375.
PDB code: 1u0i
15485839 J.J.Silberg, T.L.Tapley, K.G.Hoff, and L.E.Vickery (2004).
Regulation of the HscA ATPase reaction cycle by the co-chaperone HscB and the iron-sulfur cluster assembly protein IscU.
  J Biol Chem, 279, 53924-53931.  
15273304 J.M.Gruschus, L.E.Greene, E.Eisenberg, and J.A.Ferretti (2004).
Experimentally biased model structure of the Hsc70/auxilin complex: substrate transfer and interdomain structural change.
  Protein Sci, 13, 2029-2044.  
12718534 S.J.Landry (2003).
Structure and energetics of an allele-specific genetic interaction between dnaJ and dnaK: correlation of nuclear magnetic resonance chemical shift perturbations in the J-domain of Hsp40/DnaJ with binding affinity for the ATPase domain of Hsp70/DnaK.
  Biochemistry, 42, 4926-4936.  
11921304 C.Lee, and Y.Cho (2002).
Interactions of SV40 large T antigen and other viral proteins with retinoblastoma tumour suppressor.
  Rev Med Virol, 12, 81-92.  
11994302 K.G.Hoff, D.T.Ta, T.L.Tapley, J.J.Silberg, and L.E.Vickery (2002).
Hsc66 substrate specificity is directed toward a discrete region of the iron-sulfur cluster template protein IscU.
  J Biol Chem, 277, 27353-27359.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time. Where a reference describes a PDB structure, the PDB code is shown on the right.