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PDBsum entry 1evh
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Contractile protein
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PDB id
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1evh
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Contents |
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* Residue conservation analysis
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DOI no:
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Cell
97:471-480
(1999)
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PubMed id:
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Structure of the enabled/VASP homology 1 domain-peptide complex: a key component in the spatial control of actin assembly.
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K.E.Prehoda,
D.J.Lee,
W.A.Lim.
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ABSTRACT
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The Enabled/VASP homology 1 (EVH1; also called WH1) domain is an interaction
module found in several proteins implicated in actin-based cell motility. EVH1
domains bind the consensus proline-rich motif FPPPP and are required for
targeting the actin assembly machinery to sites of cytoskeletal remodeling. The
crystal structure of the mammalian Enabled (Mena) EVH1 domain complexed with a
peptide ligand reveals a mechanism of recognition distinct from that used by
other proline-binding modules. The EVH1 domain fold is unexpectedly similar to
that of the pleckstrin homology domain, a membrane localization module. This
finding demonstrates the functional plasticity of the pleckstrin homology fold
as a binding scaffold and suggests that membrane association may play an
auxiliary role in EVH1 targeting.
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Selected figure(s)
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Figure 4.
Figure 4. Mechanism of Proline-Rich Peptide Recognition by
EVH1 Domains(A) The peptide ligand (magenta) adopts a
PPII-helical conformation and docks into a V-shaped groove on
the domain surface (green). The orientation shown is
approximately the same as that shown in Figure 3A.(B) Close-up
bird’s-eye view of peptide ligand docked against the conserved
EVH1 domain aromatic triad (green side chains). PPII-helical
axis of the ligand is oriented vertically.(C) Schematic
comparison of EVH1 complex (same orientation as in [A]) and SH3
complex. Both domains use a series of aromatic side chains
(planar protrusions) for recognition, but their different
arrangement caused the PPII-helical ligand (triangular prism) to
dock in different orientations. SH3 recognition focuses on one
surface of the PPII helix and therefore absolutely requires
prolines at sites labeled 2 and 5. EVH1 recognition focuses more
on the overall shape of the helix and therefore shows only an
overall preference for proline residues at all positions.
Recognition interfaces of WW domains and profilin resemble the
SH3 surface.(D) Region of the Mena EVH1 domain that may interact
with C-terminal acidic residues from ActA-derived ligands. A
highly electropositive region (blue) is found immediately
adjacent to the C terminus of the bound core peptide. Potential
path of the continuing peptide chain is indicated by magenta
spheres. Figure was generated using GRASP, Molscript, and
RASTER3D.
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Figure 6.
Figure 6. Possible Mechanism for EVH1 Domain Targeting of
Actin Assembly(A) EVH1 proteins may recognize proline-rich
peptides (solid rectangle) in an acidic phospholipid context to
selectively localize to leading edge membrane sites.(B)
Pathogens such as Listeria monocytogenes may use peptide ligand
sequences that emulate the combination of interactions described
in (A). The ActA sequences have a high density of negatively
charged residues immediately C-terminal to the peptide’s
proline-rich core peptide sequence. Such ligands have higher
affinity than host-derived ligands and may constitutively
recruit EVH1 domain proteins in a nonmembrane context (e.g.,
outside of the cell wall of the gram-positive bacteria).
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The above figures are
reprinted
by permission from Cell Press:
Cell
(1999,
97,
471-480)
copyright 1999.
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Figures were
selected
by an automated process.
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Literature references that cite this PDB file's key reference
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PubMed id
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Reference
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J.E.Braun,
V.Truffault,
A.Boland,
E.Huntzinger,
C.T.Chang,
G.Haas,
O.Weichenrieder,
M.Coles,
and
E.Izaurralde
(2012).
A direct interaction between DCP1 and XRN1 couples mRNA decapping to 5' exonucleolytic degradation.
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Nat Struct Mol Biol,
19,
1324-1331.
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PDB code:
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S.D.Hansen,
and
R.D.Mullins
(2010).
VASP is a processive actin polymerase that requires monomeric actin for barbed end association.
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J Cell Biol,
191,
571-584.
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S.Terawaki,
K.Kitano,
T.Mori,
Y.Zhai,
Y.Higuchi,
N.Itoh,
T.Watanabe,
K.Kaibuchi,
and
T.Hakoshima
(2010).
The PHCCEx domain of Tiam1/2 is a novel protein- and membrane-binding module.
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EMBO J,
29,
236-250.
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PDB codes:
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F.Campa,
H.Y.Yoon,
V.L.Ha,
Z.Szentpetery,
T.Balla,
and
P.A.Randazzo
(2009).
A PH domain in the Arf GTPase-activating protein (GAP) ARAP1 binds phosphatidylinositol 3,4,5-trisphosphate and regulates Arf GAP activity independently of recruitment to the plasma membranes.
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J Biol Chem,
284,
28069-28083.
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N.M.Link,
C.Hunke,
J.W.Mueller,
J.Eichler,
and
P.Bayer
(2009).
The solution structure of pGolemi, a high affinity Mena EVH1 binding miniature protein, suggests explanations for paralog-specific binding to Ena/VASP homology (EVH) 1 domains.
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Biol Chem,
390,
417-426.
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PDB code:
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S.Goswami,
U.Philippar,
D.Sun,
A.Patsialou,
J.Avraham,
W.Wang,
F.Di Modugno,
P.Nistico,
F.B.Gertler,
and
J.S.Condeelis
(2009).
Identification of invasion specific splice variants of the cytoskeletal protein Mena present in mammary tumor cells during invasion in vivo.
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Clin Exp Metastasis,
26,
153-159.
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J.V.Small
(2008).
Facing up to Mena: Tes(ting) times for EVH1 domains.
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Nat Cell Biol,
10,
118-120.
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S.C.Graham,
R.Assenberg,
O.Delmas,
A.Verma,
A.Gholami,
C.Talbi,
R.J.Owens,
D.I.Stuart,
J.M.Grimes,
and
H.Bourhy
(2008).
Rhabdovirus matrix protein structures reveal a novel mode of self-association.
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PLoS Pathog,
4,
e1000251.
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PDB codes:
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B.Boëda,
D.C.Briggs,
T.Higgins,
B.K.Garvalov,
A.J.Fadden,
N.Q.McDonald,
and
M.Way
(2007).
Tes, a specific Mena interacting partner, breaks the rules for EVH1 binding.
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Mol Cell,
28,
1071-1082.
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PDB code:
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F.C.Peterson,
Q.Deng,
M.Zettl,
K.E.Prehoda,
W.A.Lim,
M.Way,
and
B.F.Volkman
(2007).
Multiple WASP-interacting protein recognition motifs are required for a functional interaction with N-WASP.
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J Biol Chem,
282,
8446-8453.
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PDB code:
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F.Ferron,
G.Rebowski,
S.H.Lee,
and
R.Dominguez
(2007).
Structural basis for the recruitment of profilin-actin complexes during filament elongation by Ena/VASP.
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EMBO J,
26,
4597-4606.
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PDB codes:
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J.H.Holtzman,
K.Woronowicz,
D.Golemi-Kotra,
and
A.Schepartz
(2007).
Miniature protein ligands for EVH1 domains: interplay between affinity, specificity, and cell motility.
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Biochemistry,
46,
13541-13553.
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M.Sheffield,
T.Loveless,
J.Hardin,
and
J.Pettitt
(2007).
C. elegans Enabled exhibits novel interactions with N-WASP, Abl, and cell-cell junctions.
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Curr Biol,
17,
1791-1796.
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C.Hunke,
T.Hirsch,
and
J.Eichler
(2006).
Structure-based synthetic mimicry of discontinuous protein binding sites: inhibitors of the interaction of Mena EVH1 domain with proline-rich ligands.
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Chembiochem,
7,
1258-1264.
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D.F.Ceccarelli,
H.K.Song,
F.Poy,
M.D.Schaller,
and
M.J.Eck
(2006).
Crystal structure of the FERM domain of focal adhesion kinase.
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J Biol Chem,
281,
252-259.
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PDB codes:
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S.A.Myers,
L.R.Leeper,
and
C.Y.Chung
(2006).
WASP-interacting protein is important for actin filament elongation and prompt pseudopod formation in response to a dynamic chemoattractant gradient.
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Mol Biol Cell,
17,
4564-4575.
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T.Yoshida,
T.Hisamoto,
J.Akiba,
H.Koga,
K.Nakamura,
Y.Tokunaga,
S.Hanada,
H.Kumemura,
M.Maeyama,
M.Harada,
H.Ogata,
H.Yano,
M.Kojiro,
T.Ueno,
A.Yoshimura,
and
M.Sata
(2006).
Spreds, inhibitors of the Ras/ERK signal transduction, are dysregulated in human hepatocellular carcinoma and linked to the malignant phenotype of tumors.
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Oncogene,
25,
6056-6066.
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H.M.Patterson,
J.A.Brannigan,
S.M.Cutting,
K.S.Wilson,
A.J.Wilkinson,
E.Ab,
T.Diercks,
R.N.de Jong,
V.Truffault,
G.E.Folkers,
and
R.Kaptein
(2005).
The structure of bypass of forespore C, an intercompartmental signaling factor during sporulation in Bacillus.
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J Biol Chem,
280,
36214-36220.
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PDB code:
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J.B.Xanthos,
S.J.Wanner,
and
J.R.Miller
(2005).
Cloning and developmental expression of Xenopus Enabled (Xena).
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Dev Dyn,
233,
631-637.
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L.J.Ball,
R.Kühne,
J.Schneider-Mergener,
and
H.Oschkinat
(2005).
Recognition of Proline-Rich Motifs by Protein-Protein-Interaction Domains.
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Angew Chem Int Ed Engl,
44,
2852-2869.
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W.Cho,
and
R.V.Stahelin
(2005).
Membrane-protein interactions in cell signaling and membrane trafficking.
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Annu Rev Biophys Biomol Struct,
34,
119-151.
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H.Akazawa,
S.Kudoh,
N.Mochizuki,
N.Takekoshi,
H.Takano,
T.Nagai,
and
I.Komuro
(2004).
A novel LIM protein Cal promotes cardiac differentiation by association with CSX/NKX2-5.
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J Cell Biol,
164,
395-405.
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H.Wang,
F.E.McCann,
J.D.Gordan,
X.Wu,
M.Raab,
T.H.Malik,
D.M.Davis,
and
C.E.Rudd
(2004).
ADAP-SLP-76 binding differentially regulates supramolecular activation cluster (SMAC) formation relative to T cell-APC conjugation.
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J Exp Med,
200,
1063-1074.
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J.Withee,
B.Galligan,
N.Hawkins,
and
G.Garriga
(2004).
Caenorhabditis elegans WASP and Ena/VASP proteins play compensatory roles in morphogenesis and neuronal cell migration.
|
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Genetics,
167,
1165-1176.
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K.Saito,
T.Kigawa,
S.Koshiba,
K.Sato,
Y.Matsuo,
A.Sakamoto,
T.Takagi,
M.Shirouzu,
T.Yabuki,
E.Nunokawa,
E.Seki,
T.Matsuda,
M.Aoki,
Y.Miyata,
N.Hirakawa,
M.Inoue,
T.Terada,
T.Nagase,
R.Kikuno,
M.Nakayama,
O.Ohara,
A.Tanaka,
and
S.Yokoyama
(2004).
The CAP-Gly domain of CYLD associates with the proline-rich sequence in NEMO/IKKgamma.
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Structure,
12,
1719-1728.
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PDB code:
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M.Pekkala,
R.Hieta,
U.Bergmann,
K.I.Kivirikko,
R.K.Wierenga,
and
J.Myllyharju
(2004).
The peptide-substrate-binding domain of collagen prolyl 4-hydroxylases is a tetratricopeptide repeat domain with functional aromatic residues.
|
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J Biol Chem,
279,
52255-52261.
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PDB code:
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M.She,
C.J.Decker,
K.Sundramurthy,
Y.Liu,
N.Chen,
R.Parker,
and
H.Song
(2004).
Crystal structure of Dcp1p and its functional implications in mRNA decapping.
|
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Nat Struct Mol Biol,
11,
249-256.
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PDB code:
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Y.Le Page,
F.Demay,
and
G.Salbert
(2004).
A neural-specific splicing event generates an active form of the Wiskott-Aldrich syndrome protein.
|
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EMBO Rep,
5,
895-900.
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A.V.Kwiatkowski,
F.B.Gertler,
and
J.J.Loureiro
(2003).
Function and regulation of Ena/VASP proteins.
|
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Trends Cell Biol,
13,
386-392.
|
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J.Zimmermann,
R.Kühne,
R.Volkmer-Engert,
T.Jarchau,
U.Walter,
H.Oschkinat,
and
L.J.Ball
(2003).
Design of N-substituted peptomer ligands for EVH1 domains.
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J Biol Chem,
278,
36810-36818.
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K.F.Ahmad,
A.Melnick,
S.Lax,
D.Bouchard,
J.Liu,
C.L.Kiang,
S.Mayer,
S.Takahashi,
J.D.Licht,
and
G.G.Privé
(2003).
Mechanism of SMRT corepressor recruitment by the BCL6 BTB domain.
|
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Mol Cell,
12,
1551-1564.
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PDB codes:
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K.Imai,
S.Nonoyama,
and
H.D.Ochs
(2003).
WASP (Wiskott-Aldrich syndrome protein) gene mutations and phenotype.
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Curr Opin Allergy Clin Immunol,
3,
427-436.
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K.Tani,
S.Sato,
T.Sukezane,
H.Kojima,
H.Hirose,
H.Hanafusa,
and
T.Shishido
(2003).
Abl interactor 1 promotes tyrosine 296 phosphorylation of mammalian enabled (Mena) by c-Abl kinase.
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J Biol Chem,
278,
21685-21692.
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M.Krause,
E.W.Dent,
J.E.Bear,
J.J.Loureiro,
and
F.B.Gertler
(2003).
Ena/VASP proteins: regulators of the actin cytoskeleton and cell migration.
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Annu Rev Cell Dev Biol,
19,
541-564.
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R.Grosse,
J.W.Copeland,
T.P.Newsome,
M.Way,
and
R.Treisman
(2003).
A role for VASP in RhoA-Diaphanous signalling to actin dynamics and SRF activity.
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EMBO J,
22,
3050-3061.
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R.Hieta,
L.Kukkola,
P.Permi,
P.Pirilä,
K.I.Kivirikko,
I.Kilpeläinen,
and
J.Myllyharju
(2003).
The peptide-substrate-binding domain of human collagen prolyl 4-hydroxylases. Backbone assignments, secondary structure, and binding of proline-rich peptides.
|
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J Biol Chem,
278,
34966-34974.
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S.C.Panchal,
D.A.Kaiser,
E.Torres,
T.D.Pollard,
and
M.K.Rosen
(2003).
A conserved amphipathic helix in WASP/Scar proteins is essential for activation of Arp2/3 complex.
|
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Nat Struct Biol,
10,
591-598.
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S.I.Anderson,
B.Behrendt,
L.M.Machesky,
R.H.Insall,
and
G.B.Nash
(2003).
Linked regulation of motility and integrin function in activated migrating neutrophils revealed by interference in remodelling of the cytoskeleton.
|
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Cell Motil Cytoskeleton,
54,
135-146.
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S.J.Winder
(2003).
Structural insights into actin-binding, branching and bundling proteins.
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Curr Opin Cell Biol,
15,
14-22.
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V.Auerbuch,
J.J.Loureiro,
F.B.Gertler,
J.A.Theriot,
and
D.A.Portnoy
(2003).
Ena/VASP proteins contribute to Listeria monocytogenes pathogenesis by controlling temporal and spatial persistence of bacterial actin-based motility.
|
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Mol Microbiol,
49,
1361-1375.
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A.S.Sechi,
J.Buer,
J.Wehland,
and
M.Probst-Kepper
(2002).
Changes in actin dynamics at the T-cell/APC interface: implications for T-cell anergy?
|
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Immunol Rev,
189,
98.
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B.F.Volkman,
K.E.Prehoda,
J.A.Scott,
F.C.Peterson,
and
W.A.Lim
(2002).
Structure of the N-WASP EVH1 domain-WIP complex: insight into the molecular basis of Wiskott-Aldrich Syndrome.
|
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Cell,
111,
565-576.
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PDB code:
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D.A.Portnoy,
V.Auerbuch,
and
I.J.Glomski
(2002).
The cell biology of Listeria monocytogenes infection: the intersection of bacterial pathogenesis and cell-mediated immunity.
|
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J Cell Biol,
158,
409-414.
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J.J.Loureiro,
D.A.Rubinson,
J.E.Bear,
G.A.Baltus,
A.V.Kwiatkowski,
and
F.B.Gertler
(2002).
Critical roles of phosphorylation and actin binding motifs, but not the central proline-rich region, for Ena/vasodilator-stimulated phosphoprotein (VASP) function during cell migration.
|
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Mol Biol Cell,
13,
2533-2546.
|
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M.B.Yaffe
(2002).
Phosphotyrosine-binding domains in signal transduction.
|
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Nat Rev Mol Cell Biol,
3,
177-186.
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M.Zettl,
and
M.Way
(2002).
The WH1 and EVH1 domains of WASP and Ena/VASP family members bind distinct sequence motifs.
|
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Curr Biol,
12,
1617-1622.
|
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P.J.Renfranz,
and
M.C.Beckerle
(2002).
Doing (F/L)PPPPs: EVH1 domains and their proline-rich partners in cell polarity and migration.
|
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Curr Opin Cell Biol,
14,
88.
|
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B.L.Langille
(2001).
Morphologic responses of endothelium to shear stress: reorganization of the adherens junction.
|
| |
Microcirculation,
8,
195-206.
|
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C.Krawczyk,
and
J.M.Penninger
(2001).
Molecular controls of antigen receptor clustering and autoimmunity.
|
| |
Trends Cell Biol,
11,
212-220.
|
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G.A.Koretzky,
and
P.S.Myung
(2001).
Positive and negative regulation of T-cell activation by adaptor proteins.
|
| |
Nat Rev Immunol,
1,
95.
|
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H.N.Higgs,
and
T.D.Pollard
(2001).
Regulation of actin filament network formation through ARP2/3 complex: activation by a diverse array of proteins.
|
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Annu Rev Biochem,
70,
649-676.
|
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J.Skoble,
V.Auerbuch,
E.D.Goley,
M.D.Welch,
and
D.A.Portnoy
(2001).
Pivotal role of VASP in Arp2/3 complex-mediated actin nucleation, actin branch-formation, and Listeria monocytogenes motility.
|
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J Cell Biol,
155,
89.
|
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M.B.Goldberg
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The most recent references are shown first.
Citation data come partly from CiteXplore and partly
from an automated harvesting procedure. Note that this is likely to be
only a partial list as not all journals are covered by
either method. However, we are continually building up the citation data
so more and more references will be included with time.
Where a reference describes a PDB structure, the PDB
code is
shown on the right.
|
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}
}
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