Literature references that cite this PDB file's
key reference
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PubMed id
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Reference
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J.Munoz,
Y.Zhou,
and
H.W.Jarrett
(2010).
LG4-5 domains of laminin-211 binds alpha-dystroglycan to allow myotube attachment and prevent anoikis.
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J Cell Physiol, 222,
111-119.
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B.Sauerzapfe,
K.Krenek,
J.Schmiedel,
W.W.Wakarchuk,
H.Pelantová,
V.Kren,
and
L.Elling
(2009).
Chemo-enzymatic synthesis of poly-N-acetyllactosamine (poly-LacNAc) structures and their characterization for CGL2-galectin-mediated binding of ECM glycoproteins to biomaterial surfaces.
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Glycoconj J, 26,
141-159.
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F.Carafoli,
N.J.Clout,
and
E.Hohenester
(2009).
Crystal structure of the LG1-3 region of the laminin alpha2 chain.
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J Biol Chem, 284,
22786-22792.
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PDB code:
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K.Umezawa,
J.Ikebe,
M.Nomizu,
H.Nakamura,
and
J.Higo
(2009).
Conformational requirement on peptides to exert laminin's activities and search for protein segments with laminin's activities.
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Biopolymers, 92,
124-131.
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N.P.Vogtländer,
H.J.Visch,
M.A.Bakker,
J.H.Berden,
and
J.van der Vlag
(2009).
Ligation of alpha-dystroglycan on podocytes induces intracellular signaling: a new mechanism for podocyte effacement?
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PLoS One, 4,
e5979.
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B.P.Woodall,
A.Nyström,
R.A.Iozzo,
J.A.Eble,
S.Niland,
T.Krieg,
B.Eckes,
A.Pozzi,
and
R.V.Iozzo
(2008).
Integrin {alpha}2 1 Is the Required Receptor for Endorepellin Angiostatic Activity.
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J Biol Chem, 283,
2335-2343.
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M.M.Barroso,
E.Freire,
G.S.Limaverde,
G.M.Rocha,
E.J.Batista,
G.Weissmüller,
L.R.Andrade,
and
T.Coelho-Sampaio
(2008).
Artificial laminin polymers assembled in acidic pH mimic basement membrane organization.
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J Biol Chem, 283,
11714-11720.
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C.Anderson,
S.J.Winder,
and
A.G.Borycki
(2007).
Dystroglycan protein distribution coincides with basement membranes and muscle differentiation during mouse embryogenesis.
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Dev Dyn, 236,
2627-2635.
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C.Geslin,
M.Gaillard,
D.Flament,
K.Rouault,
M.Le Romancer,
D.Prieur,
and
G.Erauso
(2007).
Analysis of the first genome of a hyperthermophilic marine virus-like particle, PAV1, isolated from Pyrococcus abyssi.
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J Bacteriol, 189,
4510-4519.
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D.Harrison,
S.A.Hussain,
A.C.Combs,
J.M.Ervasti,
P.D.Yurchenco,
and
E.Hohenester
(2007).
Crystal structure and cell surface anchorage sites of laminin alpha1LG4-5.
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J Biol Chem, 282,
11573-11581.
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PDB code:
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V.M.Leppänen,
H.Tossavainen,
P.Permi,
L.Lehtiö,
G.Rönnholm,
A.Goldman,
I.Kilpelaïnen,
and
T.Pihlajamaa
(2007).
Crystal structure of the N-terminal NC4 domain of collagen IX, a zinc binding member of the laminin-neurexin-sex hormone binding globulin (LNS) domain family.
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J Biol Chem, 282,
23219-23230.
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PDB code:
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K.Hozumi,
N.Suzuki,
P.K.Nielsen,
M.Nomizu,
and
Y.Yamada
(2006).
Laminin alpha1 chain LG4 module promotes cell attachment through syndecans and cell spreading through integrin alpha2beta1.
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J Biol Chem, 281,
32929-32940.
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L.R.Sheckler,
L.Henry,
S.Sugita,
T.C.Südhof,
and
G.Rudenko
(2006).
Crystal structure of the second LNS/LG domain from neurexin 1alpha: Ca2+ binding and the effects of alternative splicing.
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J Biol Chem, 281,
22896-22905.
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PDB code:
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T.Sasaki,
P.G.Knyazev,
N.J.Clout,
Y.Cheburkin,
W.Göhring,
A.Ullrich,
R.Timpl,
and
E.Hohenester
(2006).
Structural basis for Gas6-Axl signalling.
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EMBO J, 25,
80-87.
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PDB code:
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A.Fallahi,
B.Kroll,
L.R.Warner,
R.J.Oxford,
K.M.Irwin,
L.M.Mercer,
S.E.Shadle,
and
J.T.Oxford
(2005).
Structural model of the amino propeptide of collagen XI alpha1 chain with similarity to the LNS domains.
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Protein Sci, 14,
1526-1537.
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E.M.Gonzalez,
C.C.Reed,
G.Bix,
J.Fu,
Y.Zhang,
B.Gopalakrishnan,
D.S.Greenspan,
and
R.V.Iozzo
(2005).
BMP-1/Tolloid-like metalloproteases process endorepellin, the angiostatic C-terminal fragment of perlecan.
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J Biol Chem, 280,
7080-7087.
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R.V.Iozzo
(2005).
Basement membrane proteoglycans: from cellar to ceiling.
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Nat Rev Mol Cell Biol, 6,
646-656.
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S.Li,
P.Liquari,
K.K.McKee,
D.Harrison,
R.Patel,
S.Lee,
and
P.D.Yurchenco
(2005).
Laminin-sulfatide binding initiates basement membrane assembly and enables receptor signaling in Schwann cells and fibroblasts.
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J Cell Biol, 169,
179-189.
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S.P.Smirnov,
P.Barzaghi,
K.K.McKee,
M.A.Ruegg,
and
P.D.Yurchenco
(2005).
Conjugation of LG domains of agrins and perlecan to polymerizing laminin-2 promotes acetylcholine receptor clustering.
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J Biol Chem, 280,
41449-41457.
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D.Bozic,
F.Sciandra,
D.Lamba,
and
A.Brancaccio
(2004).
The structure of the N-terminal region of murine skeletal muscle alpha-dystroglycan discloses a modular architecture.
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J Biol Chem, 279,
44812-44816.
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PDB code:
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K.Künneken,
G.Pohlentz,
A.Schmidt-Hederich,
U.Odenthal,
N.Smyth,
J.Peter-Katalinic,
P.Bruckner,
and
J.A.Eble
(2004).
Recombinant human laminin-5 domains. Effects of heterotrimerization, proteolytic processing, and N-glycosylation on alpha3beta1 integrin binding.
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J Biol Chem, 279,
5184-5193.
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T.Sasaki,
R.Fässler,
and
E.Hohenester
(2004).
Laminin: the crux of basement membrane assembly.
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J Cell Biol, 164,
959-963.
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A.Utani,
Y.Momota,
H.Endo,
Y.Kasuya,
K.Beck,
N.Suzuki,
M.Nomizu,
and
H.Shinkai
(2003).
Laminin alpha 3 LG4 module induces matrix metalloproteinase-1 through mitogen-activated protein kinase signaling.
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J Biol Chem, 278,
34483-34490.
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B.Saposnik,
D.Borgel,
M.Aiach,
and
S.Gandrille
(2003).
Functional properties of the sex-hormone-binding globulin (SHBG)-like domain of the anticoagulant protein S.
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Eur J Biochem, 270,
545-555.
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C.N.Tseng,
L.Zhang,
M.Cascio,
and
Z.Z.Wang
(2003).
Calcium plays a critical role in determining the acetylcholine receptor-clustering activities of alternatively spliced isoforms of Agrin.
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J Biol Chem, 278,
17236-17245.
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D.E.Michele,
and
K.P.Campbell
(2003).
Dystrophin-glycoprotein complex: post-translational processing and dystroglycan function.
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J Biol Chem, 278,
15457-15460.
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M.Bozzi,
M.Bianchi,
F.Sciandra,
M.Paci,
B.Giardina,
A.Brancaccio,
and
D.O.Cicero
(2003).
Structural characterization by NMR of the natively unfolded extracellular domain of beta-dystroglycan: toward the identification of the binding epitope for alpha-dystroglycan.
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Biochemistry, 42,
13717-13724.
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Y.Kariya,
Y.Tsubota,
T.Hirosaki,
H.Mizushima,
W.Puzon-McLaughlin,
Y.Takada,
and
K.Miyazaki
(2003).
Differential regulation of cellular adhesion and migration by recombinant laminin-5 forms with partial deletion or mutation within the G3 domain of alpha3 chain.
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J Cell Biochem, 88,
506-520.
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H.J.Spence,
Y.J.Chen,
and
S.J.Winder
(2002).
Muscular dystrophies, the cytoskeleton and cell adhesion.
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Bioessays, 24,
542-552.
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S.Li,
D.Harrison,
S.Carbonetto,
R.Fassler,
N.Smyth,
D.Edgar,
and
P.D.Yurchenco
(2002).
Matrix assembly, regulation, and survival functions of laminin and its receptors in embryonic stem cell differentiation.
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J Cell Biol, 157,
1279-1290.
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S.M.Prince,
M.Achtman,
and
J.P.Derrick
(2002).
Crystal structure of the OpcA integral membrane adhesin from Neisseria meningitidis.
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Proc Natl Acad Sci U S A, 99,
3417-3421.
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PDB code:
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S.P.Smirnov,
E.L.McDearmon,
S.Li,
J.M.Ervasti,
K.Tryggvason,
and
P.D.Yurchenco
(2002).
Contributions of the LG modules and furin processing to laminin-2 functions.
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J Biol Chem, 277,
18928-18937.
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T.Hirosaki,
Y.Tsubota,
Y.Kariya,
K.Moriyama,
H.Mizushima,
and
K.Miyazaki
(2002).
Laminin-6 is activated by proteolytic processing and regulates cellular adhesion and migration differently from laminin-5.
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J Biol Chem, 277,
49287-49295.
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T.Sasaki,
K.Mann,
J.H.Miner,
N.Miosge,
and
R.Timpl
(2002).
Domain IV of mouse laminin beta1 and beta2 chains.
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Eur J Biochem, 269,
431-442.
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T.Sasaki,
P.G.Knyazev,
Y.Cheburkin,
W.Göhring,
D.Tisi,
A.Ullrich,
R.Timpl,
and
E.Hohenester
(2002).
Crystal structure of a C-terminal fragment of growth arrest-specific protein Gas6. Receptor tyrosine kinase activation by laminin G-like domains.
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J Biol Chem, 277,
44164-44170.
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PDB code:
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T.Wibawa,
H.Soebono,
and
M.Matsuo
(2002).
Association of a missense mutation of the laminin alpha2 gene with tuberculoid type of leprosy in Indonesian patients.
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Trop Med Int Health, 7,
631-636.
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B.O.Villoutreix,
B.Dahlbäck,
D.Borgel,
S.Gandrille,
and
Y.A.Muller
(2001).
Three-dimensional model of the SHBG-like region of anticoagulant protein S: new structure-function insights.
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Proteins, 43,
203-216.
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M.Durbeej,
J.F.Talts,
M.D.Henry,
P.D.Yurchenco,
K.P.Campbell,
and
P.Ekblom
(2001).
Dystroglycan binding to laminin alpha1LG4 module influences epithelial morphogenesis of salivary gland and lung in vitro.
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Differentiation, 69,
121-134.
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S.Sugita,
F.Saito,
J.Tang,
J.Satz,
K.Campbell,
and
T.C.Südhof
(2001).
A stoichiometric complex of neurexins and dystroglycan in brain.
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J Cell Biol, 154,
435-445.
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The most recent references are shown first.
Citation data come partly from CiteXplore and partly
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Where a reference describes a PDB structure, the PDB
code is
shown on the right.
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374 a.a.
_CA
contouring), in which the N-terminal segment and Cys3017 in LG5 were excluded from the phasing model.
2LG4–5. (A) Calcium 1 in LG4. The calcium ligands are shown as ball-and-stick models and are labelled. Calcium–ligand bonds are shown as black sticks. A metal-bound water molecule is shown in yellow. (B) Calcium 2 in LG5. The calcium coordination is similar to calcium 1, but Asp2861 from a packing-related molecule in the crystal (in yellow) occupies the fifth coordination site (see the text).
