Literature references that cite this PDB file's
key reference
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PubMed id
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Reference
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J.J.Truglio,
E.Karakas,
B.Rhau,
H.Wang,
M.J.DellaVecchia,
B.Van Houten,
and
C.Kisker
(2006).
Structural basis for DNA recognition and processing by UvrB.
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Nat Struct Mol Biol, 13,
360-364.
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PDB code:
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M.P.Killoran,
and
J.L.Keck
(2006).
Sit down, relax and unwind: structural insights into RecQ helicase mechanisms.
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Nucleic Acids Res, 34,
4098-4105.
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S.Rocak,
B.Emery,
N.K.Tanner,
and
P.Linder
(2005).
Characterization of the ATPase and unwinding activities of the yeast DEAD-box protein Has1p and the analysis of the roles of the conserved motifs.
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Nucleic Acids Res, 33,
999.
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T.Xu,
A.Sampath,
A.Chao,
D.Wen,
M.Nanao,
P.Chene,
S.G.Vasudevan,
and
J.Lescar
(2005).
Structure of the Dengue virus helicase/nucleoside triphosphatase catalytic domain at a resolution of 2.4 A.
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J Virol, 79,
10278-10288.
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PDB codes:
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H.Ma,
and
Y.Zou
(2004).
Thermodynamic characterization of the interaction of mutant UvrB protein with damaged DNA.
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Biochemistry, 43,
4206-4211.
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H.Shi,
O.Cordin,
C.M.Minder,
P.Linder,
and
R.M.Xu
(2004).
Crystal structure of the human ATP-dependent splicing and export factor UAP56.
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Proc Natl Acad Sci U S A, 101,
17628-17633.
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PDB codes:
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J.J.Truglio,
D.L.Croteau,
M.Skorvaga,
M.J.DellaVecchia,
K.Theis,
B.S.Mandavilli,
B.Van Houten,
and
C.Kisker
(2004).
Interactions between UvrA and UvrB: the role of UvrB's domain 2 in nucleotide excision repair.
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EMBO J, 23,
2498-2509.
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PDB code:
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M.Kampmann,
and
D.Stock
(2004).
Reverse gyrase has heat-protective DNA chaperone activity independent of supercoiling.
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Nucleic Acids Res, 32,
3537-3545.
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Y.Zou,
S.M.Shell,
C.D.Utzat,
C.Luo,
Z.Yang,
N.E.Geacintov,
and
A.K.Basu
(2003).
Effects of DNA adduct structure and sequence context on strand opening of repair intermediates and incision by UvrABC nuclease.
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Biochemistry, 42,
12654-12661.
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A.C.Rodríguez,
and
D.Stock
(2002).
Crystal structure of reverse gyrase: insights into the positive supercoiling of DNA.
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EMBO J, 21,
418-426.
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PDB codes:
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E.E.Verhoeven,
C.Wyman,
G.F.Moolenaar,
and
N.Goosen
(2002).
The presence of two UvrB subunits in the UvrAB complex ensures damage detection in both DNA strands.
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EMBO J, 21,
4196-4205.
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I.G.Minko,
Y.Zou,
and
R.S.Lloyd
(2002).
Incision of DNA-protein crosslinks by UvrABC nuclease suggests a potential repair pathway involving nucleotide excision repair.
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Proc Natl Acad Sci U S A, 99,
1905-1909.
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A.Yamagata,
R.Masui,
Y.Kakuta,
S.Kuramitsu,
and
K.Fukuyama
(2001).
Overexpression, purification and characterization of RecJ protein from Thermus thermophilus HB8 and its core domain.
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Nucleic Acids Res, 29,
4617-4624.
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E.E.Verhoeven,
C.Wyman,
G.F.Moolenaar,
J.H.Hoeijmakers,
and
N.Goosen
(2001).
Architecture of nucleotide excision repair complexes: DNA is wrapped by UvrB before and after damage recognition.
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EMBO J, 20,
601-611.
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G.F.Moolenaar,
L.Höglund,
and
N.Goosen
(2001).
Clue to damage recognition by UvrB: residues in the beta-hairpin structure prevent binding to non-damaged DNA.
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EMBO J, 20,
6140-6149.
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X.Yu,
S.A.Jacobs,
S.C.West,
T.Ogawa,
and
E.H.Egelman
(2001).
Domain structure and dynamics in the helical filaments formed by RecA and Rad51 on DNA.
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Proc Natl Acad Sci U S A, 98,
8419-8424.
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J.M.Caruthers,
E.R.Johnson,
and
D.B.McKay
(2000).
Crystal structure of yeast initiation factor 4A, a DEAD-box RNA helicase.
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Proc Natl Acad Sci U S A, 97,
13080-13085.
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PDB codes:
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Y.Kuroda,
K.Tani,
Y.Matsuo,
and
S.Yokoyama
(2000).
Automated search of natively folded protein fragments for high-throughput structure determination in structural genomics.
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Protein Sci, 9,
2313-2321.
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The most recent references are shown first.
Citation data come partly from CiteXplore and partly
from an automated harvesting procedure. Note that this is likely to be
only a partial list as not all journals are covered by
either method. However, we are continually building up the citation data
so more and more references will be included with time.
Where a reference describes a PDB structure, the PDB
code is
shown on the right.
|
552 a.a.
