Literature references that cite this PDB file's
key reference
|
 |
| |
PubMed id
|
 |
Reference
|
 |
|
|
|
 |
D.Kentner,
and
V.Sourjik
(2009).
Dynamic map of protein interactions in the Escherichia coli chemotaxis pathway.
|
| |
Mol Syst Biol, 5,
238.
|
 |
|
|
|
|
 |
A.Briegel,
H.J.Ding,
Z.Li,
J.Werner,
Z.Gitai,
D.P.Dias,
R.B.Jensen,
and
G.J.Jensen
(2008).
Location and architecture of the Caulobacter crescentus chemoreceptor array.
|
| |
Mol Microbiol, 69,
30-41.
|
 |
|
|
|
|
 |
B.Harighi
(2008).
Role of CheY1 and CheY2 in the chemotaxis of A. tumefaciens toward acetosyringone.
|
| |
Curr Microbiol, 56,
547-552.
|
 |
|
|
|
|
 |
C.H.Hansen,
R.G.Endres,
and
N.S.Wingreen
(2008).
Chemotaxis in Escherichia coli: a molecular model for robust precise adaptation.
|
| |
PLoS Comput Biol, 4,
e1.
|
 |
|
|
|
|
 |
E.Bantinaki,
R.Kassen,
C.G.Knight,
Z.Robinson,
A.J.Spiers,
and
P.B.Rainey
(2007).
Adaptive divergence in experimental populations of Pseudomonas fluorescens. III. Mutational origins of wrinkly spreader diversity.
|
| |
Genetics, 176,
441-453.
|
 |
|
|
|
|
 |
T.Gao,
X.Zhang,
N.B.Ivleva,
S.S.Golden,
and
A.LiWang
(2007).
NMR structure of the pseudo-receiver domain of CikA.
|
| |
Protein Sci, 16,
465-475.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
M.A.Laskowski,
and
B.I.Kazmierczak
(2006).
Mutational analysis of RetS, an unusual sensor kinase-response regulator hybrid required for Pseudomonas aeruginosa virulence.
|
| |
Infect Immun, 74,
4462-4473.
|
 |
|
|
|
|
 |
M.Solà,
D.L.Drew,
A.G.Blanco,
F.X.Gomis-Rüth,
and
M.Coll
(2006).
The cofactor-induced pre-active conformation in PhoB.
|
| |
Acta Crystallogr D Biol Crystallogr, 62,
1046-1057.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
M.Y.Galperin
(2006).
Structural classification of bacterial response regulators: diversity of output domains and domain combinations.
|
| |
J Bacteriol, 188,
4169-4182.
|
 |
|
|
|
|
 |
W.C.Lai,
and
G.L.Hazelbauer
(2005).
Carboxyl-terminal extensions beyond the conserved pentapeptide reduce rates of chemoreceptor adaptational modification.
|
| |
J Bacteriol, 187,
5115-5121.
|
 |
|
|
|
|
 |
C.Chan,
R.Paul,
D.Samoray,
N.C.Amiot,
B.Giese,
U.Jenal,
and
T.Schirmer
(2004).
Structural basis of activity and allosteric control of diguanylate cyclase.
|
| |
Proc Natl Acad Sci U S A, 101,
17084-17089.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
G.H.Wadhams,
and
J.P.Armitage
(2004).
Making sense of it all: bacterial chemotaxis.
|
| |
Nat Rev Mol Cell Biol, 5,
1024-1037.
|
 |
|
|
|
|
 |
H.Szurmant,
and
G.W.Ordal
(2004).
Diversity in chemotaxis mechanisms among the bacteria and archaea.
|
| |
Microbiol Mol Biol Rev, 68,
301-319.
|
 |
|
|
|
|
 |
J.G.Smith,
J.A.Latiolais,
G.P.Guanga,
J.D.Pennington,
R.E.Silversmith,
and
R.B.Bourret
(2004).
A search for amino acid substitutions that universally activate response regulators.
|
| |
Mol Microbiol, 51,
887-901.
|
 |
|
|
|
|
 |
K.Muchová,
R.J.Lewis,
D.Perecko,
J.A.Brannigan,
J.C.Ladds,
A.Leech,
A.J.Wilkinson,
and
I.Barák
(2004).
Dimer-induced signal propagation in Spo0A.
|
| |
Mol Microbiol, 53,
829-842.
|
 |
|
|
|
|
 |
S.Banno,
D.Shiomi,
M.Homma,
and
I.Kawagishi
(2004).
Targeting of the chemotaxis methylesterase/deamidase CheB to the polar receptor-kinase cluster in an Escherichia coli cell.
|
| |
Mol Microbiol, 53,
1051-1063.
|
 |
|
|
|
|
 |
S.Y.Park,
B.D.Beel,
M.I.Simon,
A.M.Bilwes,
and
B.R.Crane
(2004).
In different organisms, the mode of interaction between two signaling proteins is not necessarily conserved.
|
| |
Proc Natl Acad Sci U S A, 101,
11646-11651.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
X.Feng,
D.Walthers,
R.Oropeza,
and
L.J.Kenney
(2004).
The response regulator SsrB activates transcription and binds to a region overlapping OmpR binding sites at Salmonella pathogenicity island 2.
|
| |
Mol Microbiol, 54,
823-835.
|
 |
|
|
|
|
 |
Y.Chen,
W.R.Abdel-Fattah,
and
F.M.Hulett
(2004).
Residues required for Bacillus subtilis PhoP DNA binding or RNA polymerase interaction: alanine scanning of PhoP effector domain transactivation loop and alpha helix 3.
|
| |
J Bacteriol, 186,
1493-1502.
|
 |
|
|
|
|
 |
B.A.Mello,
and
Y.Tu
(2003).
Perfect and near-perfect adaptation in a model of bacterial chemotaxis.
|
| |
Biophys J, 84,
2943-2956.
|
 |
|
|
|
|
 |
C.Birck,
Y.Chen,
F.M.Hulett,
and
J.P.Samama
(2003).
The crystal structure of the phosphorylation domain in PhoP reveals a functional tandem association mediated by an asymmetric interface.
|
| |
J Bacteriol, 185,
254-261.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
J.H.Zhang,
G.Xiao,
R.P.Gunsalus,
and
W.L.Hubbell
(2003).
Phosphorylation triggers domain separation in the DNA binding response regulator NarL.
|
| |
Biochemistry, 42,
2552-2559.
|
 |
|
|
|
|
 |
V.L.Robinson,
T.Wu,
and
A.M.Stock
(2003).
Structural analysis of the domain interface in DrrB, a response regulator of the OmpR/PhoB subfamily.
|
| |
J Bacteriol, 185,
4186-4194.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
A.E.Maris,
M.R.Sawaya,
M.Kaczor-Grzeskowiak,
M.R.Jarvis,
S.M.Bearson,
M.L.Kopka,
I.Schröder,
R.P.Gunsalus,
and
R.E.Dickerson
(2002).
Dimerization allows DNA target site recognition by the NarL response regulator.
|
| |
Nat Struct Biol, 9,
771-778.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
G.S.Anand,
and
A.M.Stock
(2002).
Kinetic basis for the stimulatory effect of phosphorylation on the methylesterase activity of CheB.
|
| |
Biochemistry, 41,
6752-6760.
|
 |
|
|
|
|
 |
P.Roche,
L.Mouawad,
D.Perahia,
J.P.Samama,
and
D.Kahn
(2002).
Molecular dynamics of the FixJ receiver domain: movement of the beta4-alpha4 loop correlates with the in and out flip of Phe101.
|
| |
Protein Sci, 11,
2622-2630.
|
 |
|
|
|
|
 |
R.Hengge-Aronis
(2002).
Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase.
|
| |
Microbiol Mol Biol Rev, 66,
373.
|
 |
|
|
|
|
 |
E.Klauck,
M.Lingnau,
and
R.Hengge-Aronis
(2001).
Role of the response regulator RssB in sigma recognition and initiation of sigma proteolysis in Escherichia coli.
|
| |
Mol Microbiol, 40,
1381-1390.
|
 |
|
|
|
|
 |
M.P.Allen,
K.B.Zumbrennen,
and
W.R.McCleary
(2001).
Genetic evidence that the alpha5 helix of the receiver domain of PhoB is involved in interdomain interactions.
|
| |
J Bacteriol, 183,
2204-2211.
|
 |
|
|
|
|
 |
R.L.Saxl,
G.S.Anand,
and
A.M.Stock
(2001).
Synthesis and biochemical characterization of a phosphorylated analogue of the response regulator CheB.
|
| |
Biochemistry, 40,
12896-12903.
|
 |
|
|
|
|
 |
A.Bren,
and
M.Eisenbach
(2000).
How signals are heard during bacterial chemotaxis: protein-protein interactions in sensory signal propagation.
|
| |
J Bacteriol, 182,
6865-6873.
|
 |
|
|
|
|
 |
A.M.Stock,
V.L.Robinson,
and
P.N.Goudreau
(2000).
Two-component signal transduction.
|
| |
Annu Rev Biochem, 69,
183-215.
|
 |
|
|
|
|
 |
G.S.Anand,
P.N.Goudreau,
J.K.Lewis,
and
A.M.Stoc
(2000).
Evidence for phosphorylation-dependent conformational changes in methylesterase CheB.
|
| |
Protein Sci, 9,
898-906.
|
 |
|
|
|
|
 |
J.Lee,
J.T.Owens,
I.Hwang,
C.Meares,
and
S.Kustu
(2000).
Phosphorylation-induced signal propagation in the response regulator ntrC.
|
| |
J Bacteriol, 182,
5188-5195.
|
 |
|
|
|
|
 |
R.J.Lewis,
S.Krzywda,
J.A.Brannigan,
J.P.Turkenburg,
K.Muchová,
E.J.Dodson,
I.Barák,
and
A.J.Wilkinson
(2000).
The trans-activation domain of the sporulation response regulator Spo0A revealed by X-ray crystallography.
|
| |
Mol Microbiol, 38,
198-212.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
R.P.Garg,
J.Huang,
W.Yindeeyoungyeon,
T.P.Denny,
and
M.A.Schell
(2000).
Multicomponent transcriptional regulation at the complex promoter of the exopolysaccharide I biosynthetic operon of Ralstonia solanacearum.
|
| |
J Bacteriol, 182,
6659-6666.
|
 |
|
|
|
|
 |
D.Yan,
H.S.Cho,
C.A.Hastings,
M.M.Igo,
S.Y.Lee,
J.G.Pelton,
V.Stewart,
D.E.Wemmer,
and
S.Kustu
(1999).
Beryllofluoride mimics phosphorylation of NtrC and other bacterial response regulators.
|
| |
Proc Natl Acad Sci U S A, 96,
14789-14794.
|
 |
|
|
|
|
 |
J.A.Freeman,
and
B.L.Bassler
(1999).
A genetic analysis of the function of LuxO, a two-component response regulator involved in quorum sensing in Vibrio harveyi.
|
| |
Mol Microbiol, 31,
665-677.
|
 |
|
|
|
|
 |
K.Muchová,
R.J.Lewis,
J.A.Brannigan,
W.A.Offen,
D.P.Brown,
I.Barák,
P.Youngman,
and
A.J.Wilkinson
(1999).
Crystallization of the regulatory and effector domains of the key sporulation response regulator Spo0A.
|
| |
Acta Crystallogr D Biol Crystallogr, 55,
671-676.
|
 |
|
|
|
|
 |
M.Kato,
T.Shimizu,
T.Mizuno,
and
T.Hakoshima
(1999).
Structure of the histidine-containing phosphotransfer (HPt) domain of the anaerobic sensor protein ArcB complexed with the chemotaxis response regulator CheY.
|
| |
Acta Crystallogr D Biol Crystallogr, 55,
1257-1263.
|
 |
|
PDB code:
|
 |
|
|
|
|
|
 |
M.N.Levit,
Y.Liu,
and
J.B.Stock
(1999).
Mechanism of CheA protein kinase activation in receptor signaling complexes.
|
| |
Biochemistry, 38,
6651-6658.
|
 |
|
|
|
|
 |
R.Jasuja,
Y.Lin,
D.R.Trentham,
and
S.Khan
(1999).
Response tuning in bacterial chemotaxis.
|
| |
Proc Natl Acad Sci U S A, 96,
11346-11351.
|
 |
|
|
|
|
 |
S.Da Re,
J.Schumacher,
P.Rousseau,
J.Fourment,
C.Ebel,
and
D.Kahn
(1999).
Phosphorylation-induced dimerization of the FixJ receiver domain.
|
| |
Mol Microbiol, 34,
504-511.
|
 |
|
|
|
|
 |
S.K.Ames,
N.Frankema,
and
L.J.Kenney
(1999).
C-terminal DNA binding stimulates N-terminal phosphorylation of the outer membrane protein regulator OmpR from Escherichia coli.
|
| |
Proc Natl Acad Sci U S A, 96,
11792-11797.
|
 |
|
 |
 |
|
The most recent references are shown first.
Citation data come partly from CiteXplore and partly
from an automated harvesting procedure. Note that this is likely to be
only a partial list as not all journals are covered by
either method. However, we are continually building up the citation data
so more and more references will be included with time.
Where a reference describes a PDB structure, the PDB
code is
shown on the right.
|