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protein metals links
Structural genomics,unknown function PDB id
1q8c
Jmol
Contents
Protein chain
132 a.a.
Metals
_NA ×3
IOD ×7
_CL ×2
Waters ×61
PDB id:
1q8c
Name: Structural genomics,unknown function
Title: A conserved hypothetical protein from mycoplasma genitalium structural homology to nusb proteins
Structure: Hypothetical protein mg027. Chain: a
Source: Mycoplasma genitalium. Organism_taxid: 2097
Resolution:
2.00Å     R-factor:   0.255     R-free:   0.272
Authors: J.Liu,H.Yokota,R.Kim,S.-H.Kim,Berkeley Structural Genomics C (Bsgc)
Key ref:
J.Liu et al. (2004). A conserved hypothetical protein from Mycoplasma genitalium shows structural homology to nusb proteins. Proteins, 55, 1082-1086. PubMed id: 15146506 DOI: 10.1002/prot.20119
Date:
20-Aug-03     Release date:   30-Sep-03    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P47273  (Y027_MYCGE) -  Uncharacterized protein MG027
Seq:
Struc: 		151 a.a.
132 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Gene Ontology (GO) functional annotation 
  GO annot!
  Biological process     regulation of transcription, DNA-dependent   1 term 
  Biochemical function     RNA binding     1 term  

 

 
DOI no: 10.1002/prot.20119 Proteins 55:1082-1086 (2004)
PubMed id: 15146506  
 
 
A conserved hypothetical protein from Mycoplasma genitalium shows structural homology to nusb proteins.
J.Liu, H.Yokota, R.Kim, S.H.Kim.
 
  ABSTRACT  
 
No abstract given.

 
  Selected figure(s)  
 
Figure 1.
Figure 1. Ribbon diagram of MG027 crystal structure. H stands for -helix. N, C stands for N-terminal and C-terminal respectively. This ribbon diagram was made by using the program RIBBONS. 		Figure 2.
Figure 2. Stereo ribbon diagrams of the C atoms superposition between MG027 and mt-NusB structure. MG027 structure was drawn in red and mt-nusB structure was drawn in green. H represents -helix. This ribbon diagram was made by using the program RIBBONS.
 
  The above figures are reprinted by permission from John Wiley & Sons, Inc.: Proteins (2004, 55, 1082-1086) copyright 2004.  
  Figures were selected by the author.  

Literature references that cite this PDB file's key reference

  PubMed id Reference
17764033 D.H.Shin, J.Hou, J.M.Chandonia, D.Das, I.G.Choi, R.Kim, and S.H.Kim (2007).
Structure-based inference of molecular functions of proteins of unknown function from Berkeley Structural Genomics Center.
  J Struct Funct Genomics, 8, 99.  
16211501 S.H.Kim, D.H.Shin, J.Liu, V.Oganesyan, S.Chen, Q.S.Xu, J.S.Kim, D.Das, U.Schulze-Gahmen, S.R.Holbrook, E.L.Holbrook, B.A.Martinez, N.Oganesyan, A.DeGiovanni, Y.Lou, M.Henriquez, C.Huang, J.Jancarik, R.Pufan, I.G.Choi, J.M.Chandonia, J.Hou, B.Gold, H.Yokota, S.E.Brenner, P.D.Adams, and R.Kim (2005).
Structural genomics of minimal organisms and protein fold space.
  J Struct Funct Genomics, 6, 63-70.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time.