data_L1A
#
_chem_comp.id L1A
_chem_comp.name
N-(MORPHOLIN-4-YLSULFONYL)-L-PHENYLALANYL-3-(2-AMINO-1,3-THIAZOL-4-YL)-N-{(1R,2R,3S)-1-[(1R)-CYCLOHEX-3-EN-1-YLMETHYL]-2,3-DIHYDROXY-5-METHYLHEXYL}-L-ALANINAMIDE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C33 H50 N6 O7 S2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2006-02-27
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 706.916
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code L1A
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2G20
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
L1A C1 C1 C 0 1 Y N N N N N 15.329 49.258 102.682 -5.346 4.670 1.227 C1 L1A 1
L1A C2 C2 C 0 1 Y N N N N N 15.366 47.992 103.320 -4.342 4.639 0.278 C2 L1A 2
L1A C3 C3 C 0 1 Y N N N N N 14.154 47.363 103.702 -3.299 3.739 0.403 C3 L1A 3
L1A C4 C4 C 0 1 Y N N N N N 12.902 47.985 103.452 -3.266 2.865 1.473 C4 L1A 4
L1A C5 C5 C 0 1 Y N N N N N 12.875 49.254 102.811 -4.269 2.897 2.423 C5 L1A 5
L1A C6 C6 C 0 1 Y N N N N N 14.082 49.888 102.428 -5.309 3.799 2.300 C6 L1A 6
L1A N1 N1 N 0 1 N N N N N N 10.321 44.373 103.853 -0.153 0.008 0.352 N1 L1A 7
L1A C7 C7 C 0 1 N N N N N N 9.924 45.561 103.349 -1.319 -0.358 0.920 C7 L1A 8
L1A C8 C8 C 0 1 N N S N N N 11.058 46.411 102.738 -2.499 0.580 0.892 C8 L1A 9
L1A C9 C9 C 0 1 N N N N N N 11.633 47.294 103.863 -2.132 1.882 1.607 C9 L1A 10
L1A O1 O1 O 0 1 N N N N N N 8.756 45.959 103.352 -1.420 -1.443 1.454 O1 L1A 11
L1A N2 N2 N 0 1 N N N N N N 10.530 47.261 101.677 -3.637 -0.046 1.570 N2 L1A 12
L1A C10 C10 C 0 1 N N N N N N 10.001 42.840 105.709 2.269 -0.110 0.269 C10 L1A 13
L1A N3 N3 N 0 1 N N N N N N 9.542 43.416 106.902 3.459 -0.743 0.273 N3 L1A 14
L1A C11 C11 C 0 1 Y N N N N N 7.330 40.705 104.211 -1.255 -2.844 -1.591 C11 L1A 15
L1A C12 C12 C 0 1 Y N N N N N 7.588 41.844 103.571 -0.316 -2.758 -0.619 C12 L1A 16
L1A C13 C13 C 0 1 N N N N N N 8.945 42.447 103.372 0.896 -1.880 -0.795 C13 L1A 17
L1A C14 C14 C 0 1 N N S N N N 9.348 43.466 104.457 0.993 -0.904 0.380 C14 L1A 18
L1A S1 S1 S 0 1 Y N N N N N 5.641 40.323 104.263 -2.405 -3.989 -0.843 S1 L1A 19
L1A N4 N4 N 0 1 N N N N N N 3.919 42.216 102.997 -1.883 -5.031 1.727 N4 L1A 20
L1A C15 C15 C 0 1 Y N N N N N 5.209 41.793 103.366 -1.545 -4.232 0.646 C15 L1A 21
L1A N5 N5 N 0 1 Y N N N N N 6.353 42.471 103.081 -0.484 -3.465 0.483 N5 L1A 22
L1A O2 O2 O 0 1 N N N N N N 10.847 41.949 105.607 2.225 1.098 0.177 O2 L1A 23
L1A C16 C16 C 0 1 N N R N N N 9.905 43.151 108.347 4.700 0.028 0.166 C16 L1A 24
L1A C17 C17 C 0 1 N N N N N N 11.418 43.115 108.582 5.010 0.292 -1.309 C17 L1A 25
L1A C18 C18 C 0 1 N N R N N N 9.097 41.859 108.785 5.848 -0.762 0.795 C18 L1A 26
L1A C19 C19 C 0 1 N N S N N N 9.232 40.446 108.117 7.116 0.093 0.795 C19 L1A 27
L1A C20 C20 C 0 1 N N N N N N 8.260 39.478 108.861 8.265 -0.697 1.425 C20 L1A 28
L1A C21 C21 C 0 1 N N N N N N 8.145 38.018 108.390 9.561 0.109 1.313 C21 L1A 29
L1A C22 C22 C 0 1 N N N N N N 7.263 37.977 107.124 10.683 -0.624 2.051 C22 L1A 30
L1A C23 C23 C 0 1 N N N N N N 7.507 37.117 109.462 9.938 0.265 -0.162 C23 L1A 31
L1A O3 O3 O 0 1 N N N N N N 7.781 42.256 108.595 6.077 -1.953 0.040 O3 L1A 32
L1A O4 O4 O 0 1 N N N N N N 10.521 39.931 108.247 6.887 1.284 1.551 O4 L1A 33
L1A O5 O5 O 0 1 N N N N N N 14.663 45.968 99.032 -6.246 -1.259 -2.972 O5 L1A 34
L1A C24 C24 C 0 1 N N N N N N 14.193 47.310 98.890 -6.771 -1.863 -1.790 C24 L1A 35
L1A C25 C25 C 0 1 N N N N N N 12.847 47.451 99.627 -5.712 -1.835 -0.684 C25 L1A 36
L1A S2 S2 S 0 1 N N N N N N 10.323 46.615 100.093 -5.176 0.225 1.025 S2 L1A 37
L1A N6 N6 N 0 1 N N N N N N 11.830 46.448 99.246 -5.289 -0.437 -0.489 N6 L1A 38
L1A C26 C26 C 0 1 N N N N N N 12.414 45.078 99.317 -4.976 0.351 -1.694 C26 L1A 39
L1A C27 C27 C 0 1 N N N N N N 13.754 44.967 98.549 -6.092 0.136 -2.715 C27 L1A 40
L1A O6 O6 O 0 1 N N N N N N 9.590 47.589 99.370 -6.023 -0.560 1.853 O6 L1A 41
L1A O7 O7 O 0 1 N N N N N N 9.787 45.310 100.298 -5.279 1.630 0.840 O7 L1A 42
L1A C28 C28 C 0 1 N N N N N N 11.541 45.757 108.271 4.168 1.361 -3.411 C28 L1A 43
L1A C29 C29 C 0 1 N N R N N N 12.272 44.381 108.266 3.923 1.188 -1.907 C29 L1A 44
L1A C30 C30 C 0 1 N N N N N N 13.085 44.261 106.950 3.969 2.565 -1.243 C30 L1A 45
L1A C31 C31 C 0 1 N N N N N N 14.228 45.321 106.917 3.101 3.531 -1.997 C31 L1A 46
L1A C32 C32 C 0 1 N N N N N N 13.988 46.609 107.786 2.670 3.333 -3.202 C32 L1A 47
L1A C33 C33 C 0 1 N N N N N N 12.491 46.979 108.047 2.975 2.108 -4.013 C33 L1A 48
L1A H1 H1 H 0 1 N N N N N N 16.249 49.743 102.389 -6.159 5.374 1.131 H1 L1A 49
L1A H2 H2 H 0 1 N N N N N N 16.313 47.509 103.514 -4.370 5.319 -0.561 H2 L1A 50
L1A H3 H3 H 0 1 N N N N N N 14.183 46.399 104.189 -2.515 3.715 -0.339 H3 L1A 51
L1A H5 H5 H 0 1 N N N N N N 11.929 49.737 102.615 -4.241 2.216 3.262 H5 L1A 52
L1A H6 H6 H 0 1 N N N N N N 14.054 50.852 101.942 -6.094 3.823 3.042 H6 L1A 53
L1A HN1 HN1 H 0 1 N N N N N N 11.286 44.113 103.813 -0.073 0.875 -0.075 HN1 L1A 54
L1A H8 H8 H 0 1 N N N N N N 11.836 45.761 102.310 -2.766 0.796 -0.142 H8 L1A 55
L1A H91 1H9 H 0 1 N N N N N N 10.887 48.059 104.124 -1.950 1.678 2.663 H91 L1A 56
L1A H92 2H9 H 0 1 N N N N N N 11.864 46.643 104.719 -1.231 2.301 1.158 H92 L1A 57
L1A HN2 HN2 H 0 1 N N N N N N 11.170 48.024 101.586 -3.488 -0.619 2.339 HN2 L1A 58
L1A HN3 HN3 H 0 1 N N N N N N 8.852 44.129 106.776 3.494 -1.710 0.347 HN3 L1A 59
L1A H11 H11 H 0 1 N N N N N N 8.095 40.083 104.652 -1.298 -2.355 -2.553 H11 L1A 60
L1A H131 1H13 H 0 0 N N N N N N 9.683 41.631 103.382 0.808 -1.321 -1.726 H131 L1A 61
L1A H132 2H13 H 0 0 N N N N N N 8.915 42.992 102.417 1.792 -2.500 -0.827 H132 L1A 62
L1A H14 H14 H 0 1 N N N N N N 8.427 43.962 104.798 0.992 -1.461 1.316 H14 L1A 63
L1A HN41 1HN4 H 0 0 N N N N N N 3.970 43.082 102.499 -2.702 -5.551 1.709 HN41 L1A 64
L1A HN42 2HN4 H 0 0 N N N N N N 3.074 41.723 103.203 -1.301 -5.071 2.502 HN42 L1A 65
L1A H16 H16 H 0 1 N N N N N N 9.607 43.981 109.004 4.583 0.978 0.688 H16 L1A 66
L1A H171 1H17 H 0 0 N N N N N N 11.810 42.311 107.943 5.977 0.788 -1.394 H171 L1A 67
L1A H172 2H17 H 0 0 N N N N N N 11.515 42.994 109.671 5.039 -0.654 -1.849 H172 L1A 68
L1A H18 H18 H 0 1 N N N N N N 9.513 41.623 109.775 5.588 -1.027 1.820 H18 L1A 69
L1A H19 H19 H 0 1 N N N N N N 9.000 40.542 107.046 7.376 0.358 -0.230 H19 L1A 70
L1A H201 1H20 H 0 0 N N N N N N 8.602 39.440 109.906 8.382 -1.647 0.903 H201 L1A 71
L1A H202 2H20 H 0 0 N N N N N N 7.263 39.900 108.667 8.044 -0.885 2.476 H202 L1A 72
L1A H21 H21 H 0 1 N N N N N N 9.159 37.643 108.187 9.416 1.093 1.757 H21 L1A 73
L1A H221 1H22 H 0 0 N N N N N N 6.202 37.967 107.416 11.606 -0.050 1.971 H221 L1A 74
L1A H222 2H22 H 0 0 N N N N N N 7.465 38.865 106.507 10.414 -0.736 3.102 H222 L1A 75
L1A H223 3H22 H 0 0 N N N N N N 7.493 37.069 106.547 10.828 -1.609 1.607 H223 L1A 76
L1A H231 1H23 H 0 0 N N N N N N 7.355 36.108 109.051 9.138 0.788 -0.688 H231 L1A 77
L1A H232 2H23 H 0 0 N N N N N N 8.172 37.060 110.336 10.861 0.840 -0.242 H232 L1A 78
L1A H233 3H23 H 0 0 N N N N N N 6.538 37.539 109.766 10.083 -0.719 -0.606 H233 L1A 79
L1A HO3 HO3 H 0 1 N N N N N N 7.352 42.347 109.438 6.304 -1.675 -0.858 HO3 L1A 80
L1A HO4 HO4 H 0 1 N N N N N N 10.904 39.814 107.386 6.661 1.006 2.449 HO4 L1A 81
L1A H241 1H24 H 0 0 N N N N N N 14.926 48.006 99.323 -7.046 -2.897 -2.002 H241 L1A 82
L1A H242 2H24 H 0 0 N N N N N N 14.059 47.546 97.824 -7.653 -1.313 -1.463 H242 L1A 83
L1A H251 1H25 H 0 0 N N N N N N 13.040 47.342 100.704 -4.855 -2.440 -0.979 H251 L1A 84
L1A H252 2H25 H 0 0 N N N N N N 12.438 48.434 99.352 -6.136 -2.223 0.242 H252 L1A 85
L1A H261 1H26 H 0 0 N N N N N N 11.698 44.370 98.874 -4.911 1.409 -1.437 H261 L1A 86
L1A H262 2H26 H 0 0 N N N N N N 12.612 44.850 100.375 -4.026 0.014 -2.110 H262 L1A 87
L1A H271 1H27 H 0 0 N N N N N N 13.576 45.120 97.474 -5.842 0.650 -3.642 H271 L1A 88
L1A H272 2H27 H 0 0 N N N N N N 14.188 43.969 98.708 -7.025 0.537 -2.318 H272 L1A 89
L1A H281 1H28 H 0 0 N N N N N N 11.053 45.880 109.249 5.079 1.937 -3.570 H281 L1A 90
L1A H282 2H28 H 0 0 N N N N N N 10.828 45.746 107.434 4.263 0.383 -3.882 H282 L1A 91
L1A H29 H29 H 0 1 N N N N N N 12.942 44.389 109.139 2.945 0.735 -1.745 H29 L1A 92
L1A H301 1H30 H 0 0 N N N N N N 12.414 44.428 106.095 3.616 2.490 -0.214 H301 L1A 93
L1A H302 2H30 H 0 0 N N N N N N 13.529 43.256 106.895 4.997 2.927 -1.244 H302 L1A 94
L1A H31 H31 H 0 1 N N N N N N 15.127 45.180 106.335 2.814 4.446 -1.501 H31 L1A 95
L1A H32 H32 H 0 1 N N N N N N 14.803 47.200 108.177 2.054 4.097 -3.651 H32 L1A 96
L1A H331 1H33 H 0 0 N N N N N N 12.453 47.603 108.952 3.211 2.401 -5.036 H331 L1A 97
L1A H332 2H33 H 0 0 N N N N N N 12.133 47.490 107.141 2.104 1.452 -4.019 H332 L1A 98
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
L1A C1 C2 SING Y N 1
L1A C1 C6 DOUB Y N 2
L1A C1 H1 SING N N 3
L1A C2 C3 DOUB Y N 4
L1A C2 H2 SING N N 5
L1A C3 C4 SING Y N 6
L1A C3 H3 SING N N 7
L1A C4 C5 DOUB Y N 8
L1A C4 C9 SING N N 9
L1A C5 C6 SING Y N 10
L1A C5 H5 SING N N 11
L1A C6 H6 SING N N 12
L1A N1 C7 SING N N 13
L1A N1 C14 SING N N 14
L1A N1 HN1 SING N N 15
L1A C7 C8 SING N N 16
L1A C7 O1 DOUB N N 17
L1A C8 C9 SING N N 18
L1A C8 N2 SING N N 19
L1A C8 H8 SING N N 20
L1A C9 H91 SING N N 21
L1A C9 H92 SING N N 22
L1A N2 S2 SING N N 23
L1A N2 HN2 SING N N 24
L1A C10 N3 SING N N 25
L1A C10 C14 SING N N 26
L1A C10 O2 DOUB N N 27
L1A N3 C16 SING N N 28
L1A N3 HN3 SING N N 29
L1A C11 C12 DOUB Y N 30
L1A C11 S1 SING Y N 31
L1A C11 H11 SING N N 32
L1A C12 C13 SING N N 33
L1A C12 N5 SING Y N 34
L1A C13 C14 SING N N 35
L1A C13 H131 SING N N 36
L1A C13 H132 SING N N 37
L1A C14 H14 SING N N 38
L1A S1 C15 SING Y N 39
L1A N4 C15 SING N N 40
L1A N4 HN41 SING N N 41
L1A N4 HN42 SING N N 42
L1A C15 N5 DOUB Y N 43
L1A C16 C17 SING N N 44
L1A C16 C18 SING N N 45
L1A C16 H16 SING N N 46
L1A C17 C29 SING N N 47
L1A C17 H171 SING N N 48
L1A C17 H172 SING N N 49
L1A C18 C19 SING N N 50
L1A C18 O3 SING N N 51
L1A C18 H18 SING N N 52
L1A C19 C20 SING N N 53
L1A C19 O4 SING N N 54
L1A C19 H19 SING N N 55
L1A C20 C21 SING N N 56
L1A C20 H201 SING N N 57
L1A C20 H202 SING N N 58
L1A C21 C22 SING N N 59
L1A C21 C23 SING N N 60
L1A C21 H21 SING N N 61
L1A C22 H221 SING N N 62
L1A C22 H222 SING N N 63
L1A C22 H223 SING N N 64
L1A C23 H231 SING N N 65
L1A C23 H232 SING N N 66
L1A C23 H233 SING N N 67
L1A O3 HO3 SING N N 68
L1A O4 HO4 SING N N 69
L1A O5 C24 SING N N 70
L1A O5 C27 SING N N 71
L1A C24 C25 SING N N 72
L1A C24 H241 SING N N 73
L1A C24 H242 SING N N 74
L1A C25 N6 SING N N 75
L1A C25 H251 SING N N 76
L1A C25 H252 SING N N 77
L1A S2 N6 SING N N 78
L1A S2 O6 DOUB N N 79
L1A S2 O7 DOUB N N 80
L1A N6 C26 SING N N 81
L1A C26 C27 SING N N 82
L1A C26 H261 SING N N 83
L1A C26 H262 SING N N 84
L1A C27 H271 SING N N 85
L1A C27 H272 SING N N 86
L1A C28 C29 SING N N 87
L1A C28 C33 SING N N 88
L1A C28 H281 SING N N 89
L1A C28 H282 SING N N 90
L1A C29 C30 SING N N 91
L1A C29 H29 SING N N 92
L1A C30 C31 SING N N 93
L1A C30 H301 SING N N 94
L1A C30 H302 SING N N 95
L1A C31 C32 DOUB N N 96
L1A C31 H31 SING N N 97
L1A C32 C33 SING N N 98
L1A C32 H32 SING N N 99
L1A C33 H331 SING N N 100
L1A C33 H332 SING N N 101
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
L1A SMILES ACDLabs 10.04 O=S(=O)(N1CCOCC1)NC(C(=O)NC(C(=O)NC(CC2CC=CCC2)C(O)C(O)CC(C)C)Cc3nc(sc3)N)Cc4ccccc4
L1A SMILES_CANONICAL CACTVS 3.341 CC(C)C[C@H](O)[C@H](O)[C@@H](C[C@@H]1CCC=CC1)NC(=O)[C@H](Cc2csc(N)n2)NC(=O)[C@H](Cc3ccccc3)N[S](=O)(=O)N4CCOCC4
L1A SMILES CACTVS 3.341 CC(C)C[CH](O)[CH](O)[CH](C[CH]1CCC=CC1)NC(=O)[CH](Cc2csc(N)n2)NC(=O)[CH](Cc3ccccc3)N[S](=O)(=O)N4CCOCC4
L1A SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CC(C)C[C@@H]([C@@H]([C@@H](C[C@@H]1CCC=CC1)NC(=O)[C@H](Cc2csc(n2)N)NC(=O)[C@H](Cc3ccccc3)NS(=O)(=O)N4CCOCC4)O)O
L1A SMILES "OpenEye OEToolkits" 1.5.0 CC(C)CC(C(C(CC1CCC=CC1)NC(=O)C(Cc2csc(n2)N)NC(=O)C(Cc3ccccc3)NS(=O)(=O)N4CCOCC4)O)O
L1A InChI InChI 1.03 InChI=1S/C33H50N6O7S2/c1-22(2)17-29(40)30(41)26(18-23-9-5-3-6-10-23)36-31(42)27(20-25-21-47-33(34)35-25)37-32(43)28(19-24-11-7-4-8-12-24)38-48(44,45)39-13-15-46-16-14-39/h3-5,7-8,11-12,21-23,26-30,38,40-41H,6,9-10,13-20H2,1-2H3,(H2,34,35)(H,36,42)(H,37,43)/t23-,26+,27-,28-,29-,30+/m0/s1
L1A InChIKey InChI 1.03 NZCOCZHRRKSGSQ-LUFJSDQJSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
L1A "SYSTEMATIC NAME" ACDLabs 10.04 N-(morpholin-4-ylsulfonyl)-L-phenylalanyl-3-(2-amino-1,3-thiazol-4-yl)-N-{(1R,2R,3S)-1-[(1R)-cyclohex-3-en-1-ylmethyl]-2,3-dihydroxy-5-methylhexyl}-L-alaninamide
L1A "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 (2S)-N-[(2S)-3-(2-amino-1,3-thiazol-4-yl)-1-[[(2R,3R,4S)-1-[(1R)-1-cyclohex-3-enyl]-3,4-dihydroxy-6-methyl-heptan-2-yl]amino]-1-oxo-propan-2-yl]-2-(morpholin-4-ylsulfonylamino)-3-phenyl-propanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
L1A 'Create component' 2006-02-27 RCSB
L1A 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
L1A C1 C 3.000 0.311 1
L1A C2 C 3.000 1.811 2
L1A C3 C 4.299 2.561 3
L1A C4 C 5.598 1.811 4
L1A C5 C 5.598 0.311 5
L1A C6 C 4.299 -0.439 6
L1A N1 N 9.495 -0.439 7
L1A C7 C 8.196 0.311 8
L1A C8 C 8.196 1.811 9
L1A C9 C 6.897 2.561 10
L1A O1 O 6.897 -0.439 11
L1A N2 N 9.495 2.561 12
L1A C10 C 10.794 -2.689 13
L1A N3 N 12.093 -1.939 14
L1A C11 C 6.983 -5.071 15
L1A C12 C 8.196 -4.189 16
L1A C13 C 8.196 -2.689 17
L1A C14 C 9.495 -1.939 18
L1A S1 S 7.446 -6.497 19
L1A N4 N 9.828 -7.711 20
L1A C15 C 8.946 -6.497 21
L1A N5 N 9.410 -5.071 22
L1A O2 O 10.794 -4.189 23
L1A C16 C 13.392 -2.689 24
L1A C17 C 13.392 -4.189 25
L1A C18 C 14.691 -1.939 26
L1A C19 C 14.691 -0.439 27
L1A C20 C 15.990 0.311 28
L1A C21 C 15.990 1.811 29
L1A C22 C 17.290 2.561 30
L1A C23 C 14.691 2.561 31
L1A O3 O 15.990 -2.689 32
L1A O4 O 13.392 0.311 33
L1A O5 O 9.495 8.561 34
L1A C24 C 10.794 7.811 35
L1A C25 C 10.794 6.311 36
L1A S2 S 9.495 4.061 37
L1A N6 N 9.495 5.561 38
L1A C26 C 8.196 6.311 39
L1A C27 C 8.196 7.811 40
L1A O6 O 7.995 4.061 41
L1A O7 O 10.995 4.061 42
L1A C28 C 14.691 -6.439 43
L1A C29 C 14.691 -4.939 44
L1A C30 C 15.990 -4.189 45
L1A C31 C 17.290 -4.939 46
L1A C32 C 17.290 -6.439 47
L1A C33 C 15.990 -7.189 48
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
L1A C1 C2 DOUBLE NONE 1
L1A C1 C6 SINGLE NONE 2
L1A C2 C3 SINGLE NONE 3
L1A C3 C4 DOUBLE NONE 4
L1A C4 C5 SINGLE NONE 5
L1A C4 C9 SINGLE NONE 6
L1A C5 C6 DOUBLE NONE 7
L1A N1 C7 SINGLE NONE 8
L1A N1 C14 SINGLE NONE 9
L1A C7 C8 SINGLE NONE 10
L1A C7 O1 DOUBLE NONE 11
L1A C8 C9 SINGLE BEGINDASH 12
L1A C8 N2 SINGLE NONE 13
L1A N2 S2 SINGLE NONE 14
L1A C10 N3 SINGLE NONE 15
L1A C10 C14 SINGLE NONE 16
L1A C10 O2 DOUBLE NONE 17
L1A N3 C16 SINGLE NONE 18
L1A C11 C12 DOUBLE NONE 19
L1A C11 S1 SINGLE NONE 20
L1A C12 C13 SINGLE NONE 21
L1A C12 N5 SINGLE NONE 22
L1A C14 C13 SINGLE BEGINDASH 23
L1A S1 C15 SINGLE NONE 24
L1A N4 C15 SINGLE NONE 25
L1A C15 N5 DOUBLE NONE 26
L1A C16 C17 SINGLE BEGINWEDGE 27
L1A C16 C18 SINGLE NONE 28
L1A C29 C17 SINGLE BEGINWEDGE 29
L1A C18 C19 SINGLE NONE 30
L1A C18 O3 SINGLE BEGINDASH 31
L1A C19 C20 SINGLE NONE 32
L1A C19 O4 SINGLE BEGINWEDGE 33
L1A C20 C21 SINGLE NONE 34
L1A C21 C22 SINGLE NONE 35
L1A C21 C23 SINGLE NONE 36
L1A O5 C24 SINGLE NONE 37
L1A O5 C27 SINGLE NONE 38
L1A C24 C25 SINGLE NONE 39
L1A C25 N6 SINGLE NONE 40
L1A S2 N6 SINGLE NONE 41
L1A S2 O6 DOUBLE NONE 42
L1A S2 O7 DOUBLE NONE 43
L1A N6 C26 SINGLE NONE 44
L1A C26 C27 SINGLE NONE 45
L1A C28 C29 SINGLE NONE 46
L1A C28 C33 SINGLE NONE 47
L1A C29 C30 SINGLE NONE 48
L1A C30 C31 SINGLE NONE 49
L1A C31 C32 DOUBLE NONE 50
L1A C32 C33 SINGLE NONE 51
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
L1A MurckoScaffold S1 scaffold 'O=C(NCC[C@H]1CC=CCC1)[C@H](Cc1cscn1)NC(=O)[C@H](Cc1ccccc1)NS(=O)(=O)N1CCOCC1' InChI=1S/C27H37N5O5S2/c33-26(28-12-11-21-7-3-1-4-8-21)24(18-23-19-38-20-29-23)30-27(34)25(17-22-9-5-2-6-10-22)31-39(35,36)32-13-15-37-16-14-32/h1-3,5-6,9-10,19-21,24-25,31H,4,7-8,11-18H2,(H,28,33)(H,30,34)/t21-,24-,25-/m0/s1 BSBKDQDQSLOEDD-TUSQITKMSA-N
L1A amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
L1A peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
L1A phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
L1A thiazole F4 fragment c1cscn1 InChI=1S/C3H3NS/c1-2-5-3-4-1/h1-3H FZWLAAWBMGSTSO-UHFFFAOYSA-N
L1A Z237754566 F5 fragment CCNS(=O)(=O)N(CC)CC InChI=1S/C6H16N2O2S/c1-4-7-11(9,10)8(5-2)6-3/h7H,4-6H2,1-3H3 FEGBCVVJGMDIML-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
L1A C1 S1 1
L1A C2 S1 1
L1A C3 S1 1
L1A C4 S1 1
L1A C5 S1 1
L1A C6 S1 1
L1A N1 S1 1
L1A C7 S1 1
L1A C8 S1 1
L1A C9 S1 1
L1A O1 S1 1
L1A N2 S1 1
L1A C10 S1 1
L1A N3 S1 1
L1A C11 S1 1
L1A C12 S1 1
L1A C13 S1 1
L1A C14 S1 1
L1A S1 S1 1
L1A C15 S1 1
L1A N5 S1 1
L1A O2 S1 1
L1A C16 S1 1
L1A C17 S1 1
L1A O5 S1 1
L1A C24 S1 1
L1A C25 S1 1
L1A S2 S1 1
L1A N6 S1 1
L1A C26 S1 1
L1A C27 S1 1
L1A O6 S1 1
L1A O7 S1 1
L1A C28 S1 1
L1A C29 S1 1
L1A C30 S1 1
L1A C31 S1 1
L1A C32 S1 1
L1A C33 S1 1
L1A N1 F1 1
L1A C7 F1 1
L1A O1 F1 1
L1A C8 F1 1
L1A N3 F1 2
L1A C10 F1 2
L1A O2 F1 2
L1A C14 F1 2
L1A O1 F2 1
L1A C7 F2 1
L1A C8 F2 1
L1A N2 F2 1
L1A O2 F2 2
L1A C10 F2 2
L1A C14 F2 2
L1A N1 F2 2
L1A C1 F3 1
L1A C2 F3 1
L1A C3 F3 1
L1A C4 F3 1
L1A C5 F3 1
L1A C6 F3 1
L1A C11 F4 1
L1A C12 F4 1
L1A N5 F4 1
L1A C15 F4 1
L1A S1 F4 1
L1A C7 F5 1
L1A C8 F5 1
L1A N2 F5 1
L1A S2 F5 1
L1A O6 F5 1
L1A O7 F5 1
L1A N6 F5 1
L1A C25 F5 1
L1A C24 F5 1
L1A C26 F5 1
L1A C27 F5 1
L1A C9 F5 2
L1A C8 F5 2
L1A N2 F5 2
L1A S2 F5 2
L1A O6 F5 2
L1A O7 F5 2
L1A N6 F5 2
L1A C25 F5 2
L1A C24 F5 2
L1A C26 F5 2
L1A C27 F5 2
#
_pdbe_chem_comp_rdkit_properties.comp_id L1A
_pdbe_chem_comp_rdkit_properties.exactmw 706.318
_pdbe_chem_comp_rdkit_properties.amw 706.932
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 13
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 7
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 22
_pdbe_chem_comp_rdkit_properties.NumHBD 6
_pdbe_chem_comp_rdkit_properties.NumHBA 10
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 48
_pdbe_chem_comp_rdkit_properties.NumAtoms 98
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 15
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.606
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 6
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 357.789
_pdbe_chem_comp_rdkit_properties.tpsa 196.210
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.040
_pdbe_chem_comp_rdkit_properties.CrippenMR 183.684
_pdbe_chem_comp_rdkit_properties.chi0v 24.491
_pdbe_chem_comp_rdkit_properties.chi1v 14.031
_pdbe_chem_comp_rdkit_properties.chi2v 6.122
_pdbe_chem_comp_rdkit_properties.chi3v 6.122
_pdbe_chem_comp_rdkit_properties.chi4v 3.846
_pdbe_chem_comp_rdkit_properties.chi0n 72.858
_pdbe_chem_comp_rdkit_properties.chi1n 36.370
_pdbe_chem_comp_rdkit_properties.chi2n 4.496
_pdbe_chem_comp_rdkit_properties.chi3n 4.496
_pdbe_chem_comp_rdkit_properties.chi4n 2.683
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.920
_pdbe_chem_comp_rdkit_properties.kappa1 9.106
_pdbe_chem_comp_rdkit_properties.kappa2 18.181
_pdbe_chem_comp_rdkit_properties.kappa3 11.604
_pdbe_chem_comp_rdkit_properties.Phi 3.449
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
L1A UniChem PDBe L1A
L1A UniChem ZINC ZINC000024801066
L1A UniChem PubChem 6914630
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
L1A C1 -4.796 1.911 4.036 ETKDGv3 1
L1A C2 -5.663 1.685 3.042 ETKDGv3 2
L1A C3 -5.445 2.296 1.715 ETKDGv3 3
L1A C4 -4.368 3.073 1.494 ETKDGv3 4
L1A C5 -3.415 3.325 2.605 ETKDGv3 5
L1A C6 -3.621 2.776 3.808 ETKDGv3 6
L1A N1 -1.842 1.362 0.692 ETKDGv3 7
L1A C7 -2.013 2.345 -0.345 ETKDGv3 8
L1A C8 -3.388 2.743 -0.852 ETKDGv3 9
L1A C9 -4.116 3.681 0.135 ETKDGv3 10
L1A O1 -1.005 2.941 -0.811 ETKDGv3 11
L1A N2 -4.242 1.594 -1.206 ETKDGv3 12
L1A C10 0.458 0.532 0.512 ETKDGv3 13
L1A N3 1.830 0.959 0.542 ETKDGv3 14
L1A C11 -2.454 -1.401 2.621 ETKDGv3 15
L1A C12 -1.181 -1.003 2.533 ETKDGv3 16
L1A C13 -0.750 0.427 2.725 ETKDGv3 17
L1A C14 -0.565 1.198 1.399 ETKDGv3 18
L1A S1 -2.557 -3.145 2.274 ETKDGv3 19
L1A N4 -0.064 -4.352 1.670 ETKDGv3 20
L1A C15 -0.796 -3.184 2.031 ETKDGv3 21
L1A N5 -0.234 -2.032 2.198 ETKDGv3 22
L1A O2 0.107 -0.421 -0.232 ETKDGv3 23
L1A C16 2.929 0.290 -0.176 ETKDGv3 24
L1A C17 2.677 0.274 -1.709 ETKDGv3 25
L1A C18 3.183 -1.144 0.393 ETKDGv3 26
L1A C19 3.850 -1.137 1.806 ETKDGv3 27
L1A C20 3.744 -2.501 2.542 ETKDGv3 28
L1A C21 4.501 -3.690 1.902 ETKDGv3 29
L1A C22 4.230 -4.968 2.708 ETKDGv3 30
L1A C23 6.015 -3.442 1.823 ETKDGv3 31
L1A O3 3.973 -1.885 -0.504 ETKDGv3 32
L1A O4 3.291 -0.140 2.623 ETKDGv3 33
L1A O5 -3.181 -2.426 -3.539 ETKDGv3 34
L1A C24 -2.098 -1.726 -4.128 ETKDGv3 35
L1A C25 -1.435 -0.698 -3.180 ETKDGv3 36
L1A S2 -3.622 0.714 -2.575 ETKDGv3 37
L1A N6 -2.313 -0.330 -2.057 ETKDGv3 38
L1A C26 -2.814 -1.517 -1.327 ETKDGv3 39
L1A C27 -2.873 -2.777 -2.209 ETKDGv3 40
L1A O6 -4.738 -0.106 -3.159 ETKDGv3 41
L1A O7 -3.139 1.679 -3.624 ETKDGv3 42
L1A C28 1.941 1.477 -3.809 ETKDGv3 43
L1A C29 2.175 1.615 -2.295 ETKDGv3 44
L1A C30 3.162 2.772 -2.035 ETKDGv3 45
L1A C31 2.804 4.020 -2.806 ETKDGv3 46
L1A C32 2.034 3.997 -3.908 ETKDGv3 47
L1A C33 1.309 2.757 -4.366 ETKDGv3 48
L1A H1 -4.953 1.462 5.008 ETKDGv3 49
L1A H2 -6.525 1.051 3.207 ETKDGv3 50
L1A H3 -6.159 2.102 0.924 ETKDGv3 51
L1A H5 -2.544 3.947 2.443 ETKDGv3 52
L1A H6 -2.922 2.957 4.614 ETKDGv3 53
L1A HN1 -2.680 0.847 1.037 ETKDGv3 54
L1A H8 -3.242 3.356 -1.769 ETKDGv3 55
L1A H91 -5.084 3.996 -0.314 ETKDGv3 56
L1A H92 -3.517 4.610 0.255 ETKDGv3 57
L1A HN2 -4.331 0.930 -0.408 ETKDGv3 58
L1A HN3 2.071 1.802 1.112 ETKDGv3 59
L1A H11 -3.293 -0.757 2.854 ETKDGv3 60
L1A H131 -1.490 0.961 3.358 ETKDGv3 61
L1A H132 0.205 0.437 3.289 ETKDGv3 62
L1A H14 -0.194 2.211 1.671 ETKDGv3 63
L1A HN41 0.967 -4.302 1.511 ETKDGv3 64
L1A HN42 -0.558 -5.262 1.544 ETKDGv3 65
L1A H16 3.859 0.877 -0.009 ETKDGv3 66
L1A H171 3.623 -0.001 -2.225 ETKDGv3 67
L1A H172 1.941 -0.521 -1.952 ETKDGv3 68
L1A H18 2.207 -1.666 0.474 ETKDGv3 69
L1A H19 4.921 -0.874 1.690 ETKDGv3 70
L1A H201 2.668 -2.768 2.631 ETKDGv3 71
L1A H202 4.123 -2.362 3.580 ETKDGv3 72
L1A H21 4.113 -3.874 0.879 ETKDGv3 73
L1A H221 4.727 -5.839 2.230 ETKDGv3 74
L1A H222 3.139 -5.177 2.745 ETKDGv3 75
L1A H223 4.610 -4.865 3.747 ETKDGv3 76
L1A H231 6.245 -2.633 1.101 ETKDGv3 77
L1A H232 6.420 -3.168 2.820 ETKDGv3 78
L1A H233 6.537 -4.355 1.465 ETKDGv3 79
L1A HO3 4.842 -1.413 -0.599 ETKDGv3 80
L1A HO4 2.351 -0.398 2.807 ETKDGv3 81
L1A H241 -1.338 -2.451 -4.494 ETKDGv3 82
L1A H242 -2.486 -1.186 -5.017 ETKDGv3 83
L1A H251 -0.504 -1.144 -2.768 ETKDGv3 84
L1A H252 -1.117 0.204 -3.746 ETKDGv3 85
L1A H261 -2.140 -1.720 -0.470 ETKDGv3 86
L1A H262 -3.818 -1.329 -0.888 ETKDGv3 87
L1A H271 -3.662 -3.456 -1.824 ETKDGv3 88
L1A H272 -1.910 -3.336 -2.158 ETKDGv3 89
L1A H281 2.907 1.284 -4.327 ETKDGv3 90
L1A H282 1.265 0.621 -4.019 ETKDGv3 91
L1A H29 1.200 1.865 -1.825 ETKDGv3 92
L1A H301 3.170 3.024 -0.954 ETKDGv3 93
L1A H302 4.190 2.467 -2.327 ETKDGv3 94
L1A H31 3.270 4.956 -2.514 ETKDGv3 95
L1A H32 1.843 4.929 -4.432 ETKDGv3 96
L1A H331 0.251 2.822 -4.032 ETKDGv3 97
L1A H332 1.318 2.717 -5.476 ETKDGv3 98
#