HEADER TRANSFERASE/TRANSFERASE INHIBITOR 24-JUL-17 5Y25 TITLE EGFR KINASE DOMAIN MUTANT (T790M/L858R) WITH COVALENT LIGAND NS-062 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN, UNP RESIDUES 698-1022; COMPND 5 SYNONYM: PROTO-ONCOGENE C-ERBB-1,RECEPTOR TYROSINE-PROTEIN KINASE COMPND 6 ERBB-1; COMPND 7 EC: 2.7.10.1; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFR, ERBB, ERBB1, HER1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS INHIBITOR, COMPLEX, TRANSFERASE, TRANSFERASE-TRANSFERASE INHIBITOR KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.SHIROISHI,Y.ABE,J.M.M.CAAVEIRO,S.SAKAMOTO,S.MORIMOTO,H.FUCHIDA, AUTHOR 2 N.SHINDO,A.OJIDA REVDAT 3 22-NOV-23 5Y25 1 REMARK REVDAT 2 07-AUG-19 5Y25 1 JRNL REVDAT 1 25-JUL-18 5Y25 0 JRNL AUTH N.SHINDO,H.FUCHIDA,M.SATO,K.WATARI,T.SHIBATA,K.KUWATA, JRNL AUTH 2 C.MIURA,K.OKAMOTO,Y.HATSUYAMA,K.TOKUNAGA,S.SAKAMOTO, JRNL AUTH 3 S.MORIMOTO,Y.ABE,M.SHIROISHI,J.M.M.CAAVEIRO,T.UEDA,T.TAMURA, JRNL AUTH 4 N.MATSUNAGA,T.NAKAO,S.KOYANAGI,S.OHDO,Y.YAMAGUCHI,I.HAMACHI, JRNL AUTH 5 M.ONO,A.OJIDA JRNL TITL SELECTIVE AND REVERSIBLE MODIFICATION OF KINASE CYSTEINES JRNL TITL 2 WITH CHLOROFLUOROACETAMIDES. JRNL REF NAT.CHEM.BIOL. V. 15 250 2019 JRNL REFN ESSN 1552-4469 JRNL PMID 30643284 JRNL DOI 10.1038/S41589-018-0204-3 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 9961 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.960 REMARK 3 FREE R VALUE TEST SET COUNT : 992 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 3.2644 - 3.1020 1.00 1284 139 0.3175 0.3551 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2409 REMARK 3 ANGLE : 0.696 3267 REMARK 3 CHIRALITY : 0.047 366 REMARK 3 PLANARITY : 0.005 407 REMARK 3 DIHEDRAL : 19.394 1454 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5Y25 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1300004534. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10020 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 39.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 21.70 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 54.3900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 21.40 REMARK 200 R MERGE FOR SHELL (I) : 0.58500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 7.390 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.10.1_2155 REMARK 200 STARTING MODEL: 5EDP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM HEPES PH7.5, 10% PEG 10000, 8% REMARK 280 ETHYLENE GLYCOL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 74.14550 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 74.14550 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 74.14550 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 74.14550 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 74.14550 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 74.14550 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 74.14550 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 74.14550 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 74.14550 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 74.14550 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 74.14550 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 74.14550 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 74.14550 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 74.14550 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 74.14550 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 74.14550 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 74.14550 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 74.14550 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 74.14550 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 74.14550 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 74.14550 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 74.14550 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 74.14550 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 74.14550 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 74.14550 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 74.14550 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 74.14550 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 74.14550 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 74.14550 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 74.14550 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 74.14550 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 74.14550 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 74.14550 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 74.14550 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 74.14550 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 74.14550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 691 REMARK 465 HIS A 692 REMARK 465 HIS A 693 REMARK 465 HIS A 694 REMARK 465 HIS A 695 REMARK 465 HIS A 696 REMARK 465 ARG A 748 REMARK 465 GLU A 749 REMARK 465 ALA A 750 REMARK 465 LYS A 860 REMARK 465 LEU A 861 REMARK 465 LEU A 862 REMARK 465 GLY A 863 REMARK 465 ALA A 864 REMARK 465 GLU A 865 REMARK 465 GLU A 866 REMARK 465 LYS A 867 REMARK 465 GLU A 868 REMARK 465 TYR A 869 REMARK 465 HIS A 870 REMARK 465 ALA A 871 REMARK 465 GLU A 872 REMARK 465 GLY A 873 REMARK 465 GLY A 874 REMARK 465 LYS A 875 REMARK 465 TYR A 998 REMARK 465 ARG A 999 REMARK 465 ALA A 1000 REMARK 465 LEU A 1001 REMARK 465 MET A 1002 REMARK 465 ASP A 1003 REMARK 465 GLU A 1004 REMARK 465 GLU A 1005 REMARK 465 ASP A 1006 REMARK 465 MET A 1007 REMARK 465 ILE A 1018 REMARK 465 PRO A 1019 REMARK 465 GLN A 1020 REMARK 465 GLN A 1021 REMARK 465 GLY A 1022 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 716 CG CD CE NZ REMARK 470 GLU A 734 CG CD OE1 OE2 REMARK 470 LYS A 754 CG CD CE NZ REMARK 470 ARG A 858 NE CZ NH1 NH2 REMARK 470 LYS A 960 CD CE NZ REMARK 470 ARG A 986 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 988 CG ND1 CD2 CE1 NE2 REMARK 470 ASP A 994 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 736 OH TYR A 1016 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 715 -41.05 -140.93 REMARK 500 GLU A 734 -134.20 43.86 REMARK 500 HIS A 805 19.68 -143.48 REMARK 500 ARG A 836 -3.95 68.83 REMARK 500 ASP A 837 50.13 -157.17 REMARK 500 ALA A 920 -6.08 -56.81 REMARK 500 ASP A 984 87.15 -59.36 REMARK 500 GLU A 985 -34.83 -173.43 REMARK 500 HIS A 988 129.26 62.38 REMARK 500 PRO A 992 85.70 -47.00 REMARK 500 ASP A 994 -56.05 62.40 REMARK 500 SER A 995 -105.33 -87.88 REMARK 500 ASN A 996 -87.98 56.32 REMARK 500 ASP A1009 39.70 -80.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8LU A 1100 DBREF 5Y25 A 698 1022 UNP P00533 EGFR_HUMAN 698 1022 SEQADV 5Y25 MET A 691 UNP P00533 EXPRESSION TAG SEQADV 5Y25 HIS A 692 UNP P00533 EXPRESSION TAG SEQADV 5Y25 HIS A 693 UNP P00533 EXPRESSION TAG SEQADV 5Y25 HIS A 694 UNP P00533 EXPRESSION TAG SEQADV 5Y25 HIS A 695 UNP P00533 EXPRESSION TAG SEQADV 5Y25 HIS A 696 UNP P00533 EXPRESSION TAG SEQADV 5Y25 HIS A 697 UNP P00533 EXPRESSION TAG SEQADV 5Y25 MET A 790 UNP P00533 THR 790 ENGINEERED MUTATION SEQADV 5Y25 ARG A 858 UNP P00533 LEU 858 ENGINEERED MUTATION SEQRES 1 A 332 MET HIS HIS HIS HIS HIS HIS ALA PRO ASN GLN ALA LEU SEQRES 2 A 332 LEU ARG ILE LEU LYS GLU THR GLU PHE LYS LYS ILE LYS SEQRES 3 A 332 VAL LEU GLY SER GLY ALA PHE GLY THR VAL TYR LYS GLY SEQRES 4 A 332 LEU TRP ILE PRO GLU GLY GLU LYS VAL LYS ILE PRO VAL SEQRES 5 A 332 ALA ILE LYS GLU LEU ARG GLU ALA THR SER PRO LYS ALA SEQRES 6 A 332 ASN LYS GLU ILE LEU ASP GLU ALA TYR VAL MET ALA SER SEQRES 7 A 332 VAL ASP ASN PRO HIS VAL CYS ARG LEU LEU GLY ILE CYS SEQRES 8 A 332 LEU THR SER THR VAL GLN LEU ILE MET GLN LEU MET PRO SEQRES 9 A 332 PHE GLY CYS LEU LEU ASP TYR VAL ARG GLU HIS LYS ASP SEQRES 10 A 332 ASN ILE GLY SER GLN TYR LEU LEU ASN TRP CYS VAL GLN SEQRES 11 A 332 ILE ALA LYS GLY MET ASN TYR LEU GLU ASP ARG ARG LEU SEQRES 12 A 332 VAL HIS ARG ASP LEU ALA ALA ARG ASN VAL LEU VAL LYS SEQRES 13 A 332 THR PRO GLN HIS VAL LYS ILE THR ASP PHE GLY ARG ALA SEQRES 14 A 332 LYS LEU LEU GLY ALA GLU GLU LYS GLU TYR HIS ALA GLU SEQRES 15 A 332 GLY GLY LYS VAL PRO ILE LYS TRP MET ALA LEU GLU SER SEQRES 16 A 332 ILE LEU HIS ARG ILE TYR THR HIS GLN SER ASP VAL TRP SEQRES 17 A 332 SER TYR GLY VAL THR VAL TRP GLU LEU MET THR PHE GLY SEQRES 18 A 332 SER LYS PRO TYR ASP GLY ILE PRO ALA SER GLU ILE SER SEQRES 19 A 332 SER ILE LEU GLU LYS GLY GLU ARG LEU PRO GLN PRO PRO SEQRES 20 A 332 ILE CYS THR ILE ASP VAL TYR MET ILE MET VAL LYS CYS SEQRES 21 A 332 TRP MET ILE ASP ALA ASP SER ARG PRO LYS PHE ARG GLU SEQRES 22 A 332 LEU ILE ILE GLU PHE SER LYS MET ALA ARG ASP PRO GLN SEQRES 23 A 332 ARG TYR LEU VAL ILE GLN GLY ASP GLU ARG MET HIS LEU SEQRES 24 A 332 PRO SER PRO THR ASP SER ASN PHE TYR ARG ALA LEU MET SEQRES 25 A 332 ASP GLU GLU ASP MET ASP ASP VAL VAL ASP ALA ASP GLU SEQRES 26 A 332 TYR LEU ILE PRO GLN GLN GLY HET 8LU A1100 41 HETNAM 8LU (2R)-N-[4-[(3-CHLORANYL-4-FLUORANYL-PHENYL)AMINO]-7-(3- HETNAM 2 8LU MORPHOLIN-4-YLPROPOXY)QUINAZOLIN-6-YL]-1-(2- HETNAM 3 8LU FLUORANYLETHANOYL)PYRROLIDINE-2-CARBOXAMIDE FORMUL 2 8LU C28 H31 CL F2 N6 O4 HELIX 1 AA1 SER A 752 ALA A 767 1 16 HELIX 2 AA2 CYS A 797 GLU A 804 1 8 HELIX 3 AA3 HIS A 805 ILE A 809 5 5 HELIX 4 AA4 GLY A 810 ARG A 831 1 22 HELIX 5 AA5 ALA A 839 ARG A 841 5 3 HELIX 6 AA6 PRO A 877 MET A 881 5 5 HELIX 7 AA7 ALA A 882 HIS A 888 1 7 HELIX 8 AA8 THR A 892 THR A 909 1 18 HELIX 9 AA9 GLU A 922 GLY A 930 1 9 HELIX 10 AB1 THR A 940 TRP A 951 1 12 HELIX 11 AB2 LYS A 960 ALA A 972 1 13 HELIX 12 AB3 ARG A 973 TYR A 978 5 6 HELIX 13 AB4 ASP A 1012 TYR A 1016 5 5 SHEET 1 AA1 6 ILE A 706 LEU A 707 0 SHEET 2 AA1 6 LEU A 777 LEU A 782 1 O ILE A 780 N LEU A 707 SHEET 3 AA1 6 VAL A 786 GLN A 791 -1 O ILE A 789 N LEU A 778 SHEET 4 AA1 6 ILE A 740 GLU A 746 -1 N ALA A 743 O MET A 790 SHEET 5 AA1 6 THR A 725 TRP A 731 -1 N TRP A 731 O ILE A 740 SHEET 6 AA1 6 PHE A 712 GLY A 719 -1 N LEU A 718 O VAL A 726 SHEET 1 AA2 2 VAL A 843 THR A 847 0 SHEET 2 AA2 2 HIS A 850 ILE A 853 -1 O LYS A 852 N LEU A 844 LINK SG CYS A 797 C19 8LU A1100 1555 1555 1.77 SITE 1 AC1 15 LEU A 718 ALA A 743 LYS A 745 LEU A 788 SITE 2 AC1 15 MET A 790 GLN A 791 LEU A 792 MET A 793 SITE 3 AC1 15 PRO A 794 PHE A 795 GLY A 796 CYS A 797 SITE 4 AC1 15 ASP A 800 ARG A 841 LEU A 844 CRYST1 148.291 148.291 148.291 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006743 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006743 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006743 0.00000