HEADER CELL ADHESION 20-JAN-17 5MX1 TITLE CRYSTAL STRUCTURE OF HUMAN CHONDROADHERIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHONDROADHERIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CARTILAGE LEUCINE-RICH PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CHAD, SLRR4A; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK293 C18; SOURCE 10 EXPRESSION_SYSTEM_ATCC_NUMBER: ATCC-CRL-10852; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PCEP-PU KEYWDS LEUCINE-RICH REPEAT, EXTRACELLULAR MATRIX, COLLAGEN BINDING, CELL KEYWDS 2 ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR P.PARACUELLOS,E.HOHENESTER REVDAT 3 17-JAN-24 5MX1 1 LINK REVDAT 2 27-SEP-17 5MX1 1 JRNL REVDAT 1 01-MAR-17 5MX1 0 JRNL AUTH P.PARACUELLOS,S.KALAMAJSKI,A.BONNA,D.BIHAN,R.W.FARNDALE, JRNL AUTH 2 E.HOHENESTER JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSIS OF TWO SMALL LEUCINE-RICH JRNL TITL 2 REPEAT PROTEOGLYCANS, FIBROMODULIN AND CHONDROADHERIN. JRNL REF MATRIX BIOL. V. 63 106 2017 JRNL REFN ISSN 1569-1802 JRNL PMID 28215822 JRNL DOI 10.1016/J.MATBIO.2017.02.002 REMARK 2 REMARK 2 RESOLUTION. 2.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.35 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 37322 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.820 REMARK 3 FREE R VALUE TEST SET COUNT : 1799 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 58.3715 - 5.1014 1.00 2961 143 0.1793 0.1928 REMARK 3 2 5.1014 - 4.0494 1.00 2841 173 0.1342 0.1886 REMARK 3 3 4.0494 - 3.5376 1.00 2863 139 0.1483 0.1940 REMARK 3 4 3.5376 - 3.2142 1.00 2822 152 0.1817 0.2620 REMARK 3 5 3.2142 - 2.9838 1.00 2883 135 0.2047 0.2679 REMARK 3 6 2.9838 - 2.8079 1.00 2840 144 0.2010 0.3036 REMARK 3 7 2.8079 - 2.6673 1.00 2860 140 0.2014 0.2545 REMARK 3 8 2.6673 - 2.5512 1.00 2797 160 0.2128 0.2986 REMARK 3 9 2.5512 - 2.4530 1.00 2829 132 0.2430 0.2915 REMARK 3 10 2.4530 - 2.3683 0.98 2799 147 0.2523 0.3121 REMARK 3 11 2.3683 - 2.2943 0.91 2582 114 0.2637 0.3293 REMARK 3 12 2.2943 - 2.2287 0.82 2324 122 0.2865 0.3163 REMARK 3 13 2.2287 - 2.1700 0.75 2122 98 0.2837 0.3112 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.710 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5340 REMARK 3 ANGLE : 0.690 7230 REMARK 3 CHIRALITY : 0.027 811 REMARK 3 PLANARITY : 0.002 939 REMARK 3 DIHEDRAL : 11.741 1982 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 69.3581 5.0051 51.0685 REMARK 3 T TENSOR REMARK 3 T11: 0.1831 T22: 0.1679 REMARK 3 T33: 0.1792 T12: -0.0013 REMARK 3 T13: -0.0064 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 0.3482 L22: 0.1284 REMARK 3 L33: 0.2522 L12: -0.0979 REMARK 3 L13: -0.1778 L23: -0.0376 REMARK 3 S TENSOR REMARK 3 S11: 0.0034 S12: -0.0027 S13: 0.0321 REMARK 3 S21: -0.0159 S22: 0.0033 S23: -0.0372 REMARK 3 S31: 0.0066 S32: -0.0619 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MX1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1200003155. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.739 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37325 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.170 REMARK 200 RESOLUTION RANGE LOW (A) : 58.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.14800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 75.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.84000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1XKU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 MG/ML PROTEIN + 200 MM MONOBASIC REMARK 280 POTASSIUM PHOSPHATE (PH 4.8), 20% (W/V) POLYETHYLENE GLYCOL 3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 107.72500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.35000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 107.72500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.35000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 716 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 18 REMARK 465 PRO A 19 REMARK 465 PHE A 348 REMARK 465 PRO A 349 REMARK 465 THR A 350 REMARK 465 LYS A 351 REMARK 465 ARG A 352 REMARK 465 SER A 353 REMARK 465 LYS A 354 REMARK 465 LYS A 355 REMARK 465 ALA A 356 REMARK 465 GLY A 357 REMARK 465 ARG A 358 REMARK 465 HIS A 359 REMARK 465 ALA B 18 REMARK 465 PRO B 19 REMARK 465 LEU B 20 REMARK 465 LYS B 347 REMARK 465 PHE B 348 REMARK 465 PRO B 349 REMARK 465 THR B 350 REMARK 465 LYS B 351 REMARK 465 ARG B 352 REMARK 465 SER B 353 REMARK 465 LYS B 354 REMARK 465 LYS B 355 REMARK 465 ALA B 356 REMARK 465 GLY B 357 REMARK 465 ARG B 358 REMARK 465 HIS B 359 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS B 28 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS B 23 HG CYS B 29 1.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 40 71.88 53.71 REMARK 500 ASN A 61 -144.45 -112.33 REMARK 500 ASN A 109 -165.66 -123.13 REMARK 500 ASP A 121 -2.80 66.87 REMARK 500 LEU A 122 48.85 -85.12 REMARK 500 ASN A 157 -161.85 -118.02 REMARK 500 ASN A 181 -149.83 -110.28 REMARK 500 VAL A 194 68.07 -119.10 REMARK 500 PRO A 230 70.40 -69.53 REMARK 500 LYS A 232 -41.53 66.00 REMARK 500 THR A 269 32.08 -151.36 REMARK 500 ASN A 277 64.27 62.67 REMARK 500 ASP A 323 -161.73 -129.98 REMARK 500 ALA B 22 -161.41 -111.57 REMARK 500 ASN B 61 -151.09 -109.08 REMARK 500 LEU B 98 57.50 -95.33 REMARK 500 ASN B 109 -164.02 -121.06 REMARK 500 ASP B 121 -6.42 73.92 REMARK 500 ASN B 157 -164.89 -125.16 REMARK 500 ASN B 181 -158.79 -112.26 REMARK 500 VAL B 202 32.59 -141.45 REMARK 500 ASN B 205 -155.84 -117.94 REMARK 500 LYS B 232 -52.00 66.16 REMARK 500 THR B 269 29.80 -142.05 REMARK 500 LEU B 297 19.64 -146.24 REMARK 500 ASP B 323 -165.92 -123.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 714 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH A 715 DISTANCE = 6.68 ANGSTROMS REMARK 525 HOH A 716 DISTANCE = 8.70 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 402 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 30 ND1 REMARK 620 2 ASP B 172 OD1 106.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 403 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 172 OD1 REMARK 620 2 HIS B 30 ND1 94.3 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI B 403 DBREF 5MX1 A 20 359 UNP O15335 CHAD_HUMAN 20 359 DBREF 5MX1 B 20 359 UNP O15335 CHAD_HUMAN 20 359 SEQADV 5MX1 ALA A 18 UNP O15335 EXPRESSION TAG SEQADV 5MX1 PRO A 19 UNP O15335 EXPRESSION TAG SEQADV 5MX1 ALA B 18 UNP O15335 EXPRESSION TAG SEQADV 5MX1 PRO B 19 UNP O15335 EXPRESSION TAG SEQRES 1 A 342 ALA PRO LEU ALA ALA CYS PRO GLN ASN CYS HIS CYS HIS SEQRES 2 A 342 SER ASP LEU GLN HIS VAL ILE CYS ASP LYS VAL GLY LEU SEQRES 3 A 342 GLN LYS ILE PRO LYS VAL SER GLU LYS THR LYS LEU LEU SEQRES 4 A 342 ASN LEU GLN ARG ASN ASN PHE PRO VAL LEU ALA ALA ASN SEQRES 5 A 342 SER PHE ARG ALA MET PRO ASN LEU VAL SER LEU HIS LEU SEQRES 6 A 342 GLN HIS CYS GLN ILE ARG GLU VAL ALA ALA GLY ALA PHE SEQRES 7 A 342 ARG GLY LEU LYS GLN LEU ILE TYR LEU TYR LEU SER HIS SEQRES 8 A 342 ASN ASP ILE ARG VAL LEU ARG ALA GLY ALA PHE ASP ASP SEQRES 9 A 342 LEU THR GLU LEU THR TYR LEU TYR LEU ASP HIS ASN LYS SEQRES 10 A 342 VAL THR GLU LEU PRO ARG GLY LEU LEU SER PRO LEU VAL SEQRES 11 A 342 ASN LEU PHE ILE LEU GLN LEU ASN ASN ASN LYS ILE ARG SEQRES 12 A 342 GLU LEU ARG ALA GLY ALA PHE GLN GLY ALA LYS ASP LEU SEQRES 13 A 342 ARG TRP LEU TYR LEU SER GLU ASN ALA LEU SER SER LEU SEQRES 14 A 342 GLN PRO GLY ALA LEU ASP ASP VAL GLU ASN LEU ALA LYS SEQRES 15 A 342 PHE HIS VAL ASP ARG ASN GLN LEU SER SER TYR PRO SER SEQRES 16 A 342 ALA ALA LEU SER LYS LEU ARG VAL VAL GLU GLU LEU LYS SEQRES 17 A 342 LEU SER HIS ASN PRO LEU LYS SER ILE PRO ASP ASN ALA SEQRES 18 A 342 PHE GLN SER PHE GLY ARG TYR LEU GLU THR LEU TRP LEU SEQRES 19 A 342 ASP ASN THR ASN LEU GLU LYS PHE SER ASP GLY ALA PHE SEQRES 20 A 342 LEU GLY VAL THR THR LEU LYS HIS VAL HIS LEU GLU ASN SEQRES 21 A 342 ASN ARG LEU ASN GLN LEU PRO SER ASN PHE PRO PHE ASP SEQRES 22 A 342 SER LEU GLU THR LEU ALA LEU THR ASN ASN PRO TRP LYS SEQRES 23 A 342 CYS THR CYS GLN LEU ARG GLY LEU ARG ARG TRP LEU GLU SEQRES 24 A 342 ALA LYS ALA SER ARG PRO ASP ALA THR CYS ALA SER PRO SEQRES 25 A 342 ALA LYS PHE LYS GLY GLN HIS ILE ARG ASP THR ASP ALA SEQRES 26 A 342 PHE ARG SER CYS LYS PHE PRO THR LYS ARG SER LYS LYS SEQRES 27 A 342 ALA GLY ARG HIS SEQRES 1 B 342 ALA PRO LEU ALA ALA CYS PRO GLN ASN CYS HIS CYS HIS SEQRES 2 B 342 SER ASP LEU GLN HIS VAL ILE CYS ASP LYS VAL GLY LEU SEQRES 3 B 342 GLN LYS ILE PRO LYS VAL SER GLU LYS THR LYS LEU LEU SEQRES 4 B 342 ASN LEU GLN ARG ASN ASN PHE PRO VAL LEU ALA ALA ASN SEQRES 5 B 342 SER PHE ARG ALA MET PRO ASN LEU VAL SER LEU HIS LEU SEQRES 6 B 342 GLN HIS CYS GLN ILE ARG GLU VAL ALA ALA GLY ALA PHE SEQRES 7 B 342 ARG GLY LEU LYS GLN LEU ILE TYR LEU TYR LEU SER HIS SEQRES 8 B 342 ASN ASP ILE ARG VAL LEU ARG ALA GLY ALA PHE ASP ASP SEQRES 9 B 342 LEU THR GLU LEU THR TYR LEU TYR LEU ASP HIS ASN LYS SEQRES 10 B 342 VAL THR GLU LEU PRO ARG GLY LEU LEU SER PRO LEU VAL SEQRES 11 B 342 ASN LEU PHE ILE LEU GLN LEU ASN ASN ASN LYS ILE ARG SEQRES 12 B 342 GLU LEU ARG ALA GLY ALA PHE GLN GLY ALA LYS ASP LEU SEQRES 13 B 342 ARG TRP LEU TYR LEU SER GLU ASN ALA LEU SER SER LEU SEQRES 14 B 342 GLN PRO GLY ALA LEU ASP ASP VAL GLU ASN LEU ALA LYS SEQRES 15 B 342 PHE HIS VAL ASP ARG ASN GLN LEU SER SER TYR PRO SER SEQRES 16 B 342 ALA ALA LEU SER LYS LEU ARG VAL VAL GLU GLU LEU LYS SEQRES 17 B 342 LEU SER HIS ASN PRO LEU LYS SER ILE PRO ASP ASN ALA SEQRES 18 B 342 PHE GLN SER PHE GLY ARG TYR LEU GLU THR LEU TRP LEU SEQRES 19 B 342 ASP ASN THR ASN LEU GLU LYS PHE SER ASP GLY ALA PHE SEQRES 20 B 342 LEU GLY VAL THR THR LEU LYS HIS VAL HIS LEU GLU ASN SEQRES 21 B 342 ASN ARG LEU ASN GLN LEU PRO SER ASN PHE PRO PHE ASP SEQRES 22 B 342 SER LEU GLU THR LEU ALA LEU THR ASN ASN PRO TRP LYS SEQRES 23 B 342 CYS THR CYS GLN LEU ARG GLY LEU ARG ARG TRP LEU GLU SEQRES 24 B 342 ALA LYS ALA SER ARG PRO ASP ALA THR CYS ALA SER PRO SEQRES 25 B 342 ALA LYS PHE LYS GLY GLN HIS ILE ARG ASP THR ASP ALA SEQRES 26 B 342 PHE ARG SER CYS LYS PHE PRO THR LYS ARG SER LYS LYS SEQRES 27 B 342 ALA GLY ARG HIS HET PO4 A 401 5 HET NI A 402 1 HET CL A 403 1 HET PO4 B 401 5 HET PO4 B 402 5 HET NI B 403 1 HETNAM PO4 PHOSPHATE ION HETNAM NI NICKEL (II) ION HETNAM CL CHLORIDE ION FORMUL 3 PO4 3(O4 P 3-) FORMUL 4 NI 2(NI 2+) FORMUL 5 CL CL 1- FORMUL 9 HOH *412(H2 O) HELIX 1 AA1 PRO A 211 SER A 216 1 6 HELIX 2 AA2 THR A 305 GLN A 307 5 3 HELIX 3 AA3 LEU A 308 GLU A 316 1 9 HELIX 4 AA4 PRO A 329 LYS A 333 5 5 HELIX 5 AA5 LEU B 191 GLU B 195 5 5 HELIX 6 AA6 PRO B 211 SER B 216 1 6 HELIX 7 AA7 PHE B 239 GLY B 243 5 5 HELIX 8 AA8 THR B 305 GLN B 307 5 3 HELIX 9 AA9 LEU B 308 LYS B 318 1 11 HELIX 10 AB1 PRO B 329 LYS B 333 5 5 SHEET 1 AA113 HIS A 28 HIS A 30 0 SHEET 2 AA113 HIS A 35 ILE A 37 -1 O ILE A 37 N HIS A 28 SHEET 3 AA113 LEU A 55 ASN A 57 1 O LEU A 55 N VAL A 36 SHEET 4 AA113 SER A 79 HIS A 81 1 O SER A 79 N LEU A 56 SHEET 5 AA113 TYR A 103 TYR A 105 1 O TYR A 105 N LEU A 80 SHEET 6 AA113 TYR A 127 TYR A 129 1 O TYR A 129 N LEU A 104 SHEET 7 AA113 ILE A 151 GLN A 153 1 O GLN A 153 N LEU A 128 SHEET 8 AA113 TRP A 175 TYR A 177 1 O TYR A 177 N LEU A 152 SHEET 9 AA113 LYS A 199 HIS A 201 1 O LYS A 199 N LEU A 176 SHEET 10 AA113 GLU A 223 LYS A 225 1 O LYS A 225 N PHE A 200 SHEET 11 AA113 THR A 248 TRP A 250 1 O TRP A 250 N LEU A 224 SHEET 12 AA113 HIS A 272 HIS A 274 1 O HIS A 272 N LEU A 249 SHEET 13 AA113 THR A 294 ALA A 296 1 O THR A 294 N VAL A 273 SHEET 1 AA2 2 VAL A 65 LEU A 66 0 SHEET 2 AA2 2 GLU A 89 VAL A 90 1 O GLU A 89 N LEU A 66 SHEET 1 AA3 2 GLU A 161 LEU A 162 0 SHEET 2 AA3 2 SER A 185 LEU A 186 1 O SER A 185 N LEU A 162 SHEET 1 AA4 2 SER A 233 ILE A 234 0 SHEET 2 AA4 2 LYS A 258 PHE A 259 1 O LYS A 258 N ILE A 234 SHEET 1 AA5 2 TRP A 302 LYS A 303 0 SHEET 2 AA5 2 CYS A 326 SER A 328 1 O ALA A 327 N TRP A 302 SHEET 1 AA613 HIS B 28 HIS B 30 0 SHEET 2 AA613 HIS B 35 ILE B 37 -1 O HIS B 35 N HIS B 30 SHEET 3 AA613 LEU B 55 ASN B 57 1 O ASN B 57 N VAL B 36 SHEET 4 AA613 SER B 79 HIS B 81 1 O HIS B 81 N LEU B 56 SHEET 5 AA613 TYR B 103 TYR B 105 1 O TYR B 105 N LEU B 80 SHEET 6 AA613 TYR B 127 TYR B 129 1 O TYR B 129 N LEU B 104 SHEET 7 AA613 ILE B 151 GLN B 153 1 O GLN B 153 N LEU B 128 SHEET 8 AA613 TRP B 175 TYR B 177 1 O TRP B 175 N LEU B 152 SHEET 9 AA613 LYS B 199 HIS B 201 1 O HIS B 201 N LEU B 176 SHEET 10 AA613 GLU B 223 LYS B 225 1 O GLU B 223 N PHE B 200 SHEET 11 AA613 THR B 248 TRP B 250 1 O TRP B 250 N LEU B 224 SHEET 12 AA613 HIS B 272 HIS B 274 1 O HIS B 272 N LEU B 249 SHEET 13 AA613 THR B 294 ALA B 296 1 O ALA B 296 N VAL B 273 SHEET 1 AA7 3 VAL B 65 LEU B 66 0 SHEET 2 AA7 3 GLU B 89 VAL B 90 1 O GLU B 89 N LEU B 66 SHEET 3 AA7 3 VAL B 113 LEU B 114 1 O VAL B 113 N VAL B 90 SHEET 1 AA8 2 GLU B 161 LEU B 162 0 SHEET 2 AA8 2 SER B 185 LEU B 186 1 O SER B 185 N LEU B 162 SHEET 1 AA9 2 SER B 233 ILE B 234 0 SHEET 2 AA9 2 LYS B 258 PHE B 259 1 O LYS B 258 N ILE B 234 SHEET 1 AB1 2 TRP B 302 LYS B 303 0 SHEET 2 AB1 2 CYS B 326 SER B 328 1 O ALA B 327 N TRP B 302 SSBOND 1 CYS A 23 CYS A 29 1555 1555 2.04 SSBOND 2 CYS A 27 CYS A 38 1555 1555 2.04 SSBOND 3 CYS A 304 CYS A 326 1555 1555 2.03 SSBOND 4 CYS B 23 CYS B 29 1555 1555 2.03 SSBOND 5 CYS B 27 CYS B 38 1555 1555 2.03 SSBOND 6 CYS B 304 CYS B 326 1555 1555 2.03 SSBOND 7 CYS B 306 CYS B 346 1555 1555 2.03 LINK ND1 HIS A 30 NI NI A 402 1555 1555 2.11 LINK OD1 ASP A 172 NI NI B 403 1555 1555 2.41 LINK NI NI A 402 OD1 ASP B 172 1555 1555 2.32 LINK ND1 HIS B 30 NI NI B 403 1555 1555 2.32 CISPEP 1 SER A 328 PRO A 329 0 -2.36 CISPEP 2 SER B 328 PRO B 329 0 -3.49 SITE 1 AC1 6 LYS A 40 ARG A 60 HOH A 600 GLU B 247 SITE 2 AC1 6 LYS B 271 PO4 B 402 SITE 1 AC2 4 HIS A 30 CL A 403 ASN B 148 ASP B 172 SITE 1 AC3 2 HIS A 30 NI A 402 SITE 1 AC4 5 HIS A 228 ASN A 253 HOH A 572 HOH A 698 SITE 2 AC4 5 ARG B 96 SITE 1 AC5 5 PO4 A 401 LYS B 271 HIS B 272 GLU B 293 SITE 2 AC5 5 HOH B 563 SITE 1 AC6 3 ASN A 148 ASP A 172 HIS B 30 CRYST1 215.450 60.700 57.660 90.00 100.60 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004641 0.000000 0.000869 0.00000 SCALE2 0.000000 0.016474 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017644 0.00000