HEADER CYTOKINE 23-MAR-16 5IXD TITLE STRUCTURE OF HUMAN JAK1 FERM/SH2 IN COMPLEX WITH IFN LAMBDA RECEPTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE JAK1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 35-559; COMPND 5 SYNONYM: JANUS KINASE 1,JAK-1; COMPND 6 EC: 2.7.10.2; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: INTERFERON LAMBDA RECEPTOR 1; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: UNP RESIDUES 250-299; COMPND 12 SYNONYM: IFN-LAMBDA-R1,CYTOKINE RECEPTOR CLASS-II MEMBER 12,CYTOKINE COMPND 13 RECEPTOR FAMILY 2 MEMBER 12,CRF2-12,INTERLEUKIN-28 RECEPTOR SUBUNIT COMPND 14 ALPHA,IL-28RA,LIKELY INTERLEUKIN OR CYTOKINE RECEPTOR 2,LICR2; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: JAK1, JAK1A, JAK1B; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: IFNLR1, IL28RA, LICR2; SOURCE 16 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 17 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 19 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 20 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS JAK KINASE, JAK1, IFNLR1, INTERFERON, CYTOKINE EXPDTA X-RAY DIFFRACTION AUTHOR R.FERRAO,H.J.A.WALLWEBER,P.J.LUPARDUS REVDAT 3 27-SEP-23 5IXD 1 REMARK REVDAT 2 15-JUN-16 5IXD 1 JRNL REVDAT 1 18-MAY-16 5IXD 0 JRNL AUTH R.FERRAO,H.J.WALLWEBER,H.HO,C.TAM,Y.FRANKE,J.QUINN, JRNL AUTH 2 P.J.LUPARDUS JRNL TITL THE STRUCTURAL BASIS FOR CLASS II CYTOKINE RECEPTOR JRNL TITL 2 RECOGNITION BY JAK1. JRNL REF STRUCTURE V. 24 897 2016 JRNL REFN ISSN 0969-2126 JRNL PMID 27133025 JRNL DOI 10.1016/J.STR.2016.03.023 REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 18707 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.252 REMARK 3 R VALUE (WORKING SET) : 0.249 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1866 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.2953 - 6.6901 0.98 1368 156 0.2521 0.2809 REMARK 3 2 6.6901 - 5.3130 0.99 1320 145 0.2561 0.2808 REMARK 3 3 5.3130 - 4.6422 1.00 1314 146 0.1957 0.2551 REMARK 3 4 4.6422 - 4.2181 0.99 1298 146 0.2086 0.2257 REMARK 3 5 4.2181 - 3.9160 0.98 1283 139 0.2247 0.2576 REMARK 3 6 3.9160 - 3.6852 0.99 1284 142 0.2381 0.2799 REMARK 3 7 3.6852 - 3.5007 1.00 1266 146 0.2515 0.2762 REMARK 3 8 3.5007 - 3.3484 1.00 1310 141 0.2741 0.2904 REMARK 3 9 3.3484 - 3.2195 1.00 1285 139 0.2980 0.3312 REMARK 3 10 3.2195 - 3.1085 1.00 1276 139 0.3000 0.3464 REMARK 3 11 3.1085 - 3.0113 1.00 1262 145 0.3128 0.3960 REMARK 3 12 3.0113 - 2.9252 1.00 1291 144 0.3425 0.3575 REMARK 3 13 2.9252 - 2.8482 0.99 1284 138 0.3978 0.4544 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.730 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 80.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3546 REMARK 3 ANGLE : 1.041 4817 REMARK 3 CHIRALITY : 0.320 542 REMARK 3 PLANARITY : 0.003 610 REMARK 3 DIHEDRAL : 19.849 1247 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 277 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7372 27.4634 -0.5202 REMARK 3 T TENSOR REMARK 3 T11: 0.6935 T22: 0.8165 REMARK 3 T33: 0.7276 T12: -0.3020 REMARK 3 T13: 0.3610 T23: -0.1542 REMARK 3 L TENSOR REMARK 3 L11: 4.1050 L22: 1.5376 REMARK 3 L33: 2.2810 L12: -0.8286 REMARK 3 L13: -1.6163 L23: -0.0949 REMARK 3 S TENSOR REMARK 3 S11: -0.8820 S12: 0.4416 S13: -0.6323 REMARK 3 S21: -0.3632 S22: 0.0558 S23: 0.1483 REMARK 3 S31: 0.9087 S32: -0.6402 S33: 0.0418 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 278 THROUGH 386 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.3988 43.5911 -12.0087 REMARK 3 T TENSOR REMARK 3 T11: 0.3031 T22: 0.7194 REMARK 3 T33: 0.7715 T12: -0.0150 REMARK 3 T13: 0.1124 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 6.2511 L22: 5.2732 REMARK 3 L33: 5.0931 L12: 2.4044 REMARK 3 L13: -1.5369 L23: -1.0250 REMARK 3 S TENSOR REMARK 3 S11: -0.3697 S12: 0.2563 S13: 0.1092 REMARK 3 S21: -0.2358 S22: -0.0791 S23: 0.0171 REMARK 3 S31: 0.2399 S32: -0.0651 S33: 0.3301 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 387 THROUGH 558 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.7092 17.1188 -14.1637 REMARK 3 T TENSOR REMARK 3 T11: 1.1787 T22: 0.9288 REMARK 3 T33: 1.0939 T12: 0.0680 REMARK 3 T13: 0.7249 T23: -0.1005 REMARK 3 L TENSOR REMARK 3 L11: 0.8322 L22: 1.3340 REMARK 3 L33: 0.5675 L12: -0.0900 REMARK 3 L13: 0.1526 L23: 0.2688 REMARK 3 S TENSOR REMARK 3 S11: -0.4747 S12: 0.0382 S13: -0.5263 REMARK 3 S21: -0.5240 S22: -0.1065 S23: -0.7886 REMARK 3 S31: 0.7659 S32: 0.4327 S33: 0.0942 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 250 THROUGH 255 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.7643 51.9821 9.4105 REMARK 3 T TENSOR REMARK 3 T11: 0.3718 T22: 1.0957 REMARK 3 T33: 0.7015 T12: 0.1862 REMARK 3 T13: 0.0397 T23: 0.2022 REMARK 3 L TENSOR REMARK 3 L11: 8.0512 L22: 5.0501 REMARK 3 L33: 5.0401 L12: -3.4453 REMARK 3 L13: -5.7719 L23: 0.6740 REMARK 3 S TENSOR REMARK 3 S11: 0.1818 S12: 0.5824 S13: -0.5080 REMARK 3 S21: 0.1938 S22: 0.4720 S23: -0.3414 REMARK 3 S31: -0.3762 S32: 0.6320 S33: -0.3406 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 256 THROUGH 264 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6244 42.6284 -0.4414 REMARK 3 T TENSOR REMARK 3 T11: 0.3462 T22: 1.4967 REMARK 3 T33: 0.9486 T12: 0.0227 REMARK 3 T13: 0.0411 T23: 0.0253 REMARK 3 L TENSOR REMARK 3 L11: 2.2148 L22: 0.9704 REMARK 3 L33: 1.1400 L12: 0.8416 REMARK 3 L13: -0.5214 L23: 0.3185 REMARK 3 S TENSOR REMARK 3 S11: -0.1231 S12: 0.9821 S13: -0.7163 REMARK 3 S21: -0.2429 S22: -0.3987 S23: 0.1251 REMARK 3 S31: 0.0682 S32: -0.2096 S33: -0.2007 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 265 THROUGH 270 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6982 31.2815 -10.5118 REMARK 3 T TENSOR REMARK 3 T11: 0.8710 T22: 1.1380 REMARK 3 T33: 0.7946 T12: -0.2499 REMARK 3 T13: 0.1132 T23: -0.4664 REMARK 3 L TENSOR REMARK 3 L11: 8.3824 L22: 9.6188 REMARK 3 L33: 9.9965 L12: -2.1829 REMARK 3 L13: 1.2497 L23: 5.8106 REMARK 3 S TENSOR REMARK 3 S11: -0.3331 S12: -0.3676 S13: 0.1915 REMARK 3 S21: -1.4263 S22: 0.7137 S23: -0.1259 REMARK 3 S31: -2.0105 S32: -0.6118 S33: -0.1770 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5IXD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000219616. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18724 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.850 REMARK 200 RESOLUTION RANGE LOW (A) : 44.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.82900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4PO6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1-0.2 M AMMONIUM CITRATE TRIBASIC PH REMARK 280 7, 5-15% PEG 3350, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.49000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 36.49000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 55.58500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 96.60000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 55.58500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 96.60000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 36.49000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 55.58500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 96.60000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 36.49000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 55.58500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 96.60000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 19 REMARK 465 HIS A 20 REMARK 465 HIS A 21 REMARK 465 HIS A 22 REMARK 465 HIS A 23 REMARK 465 HIS A 24 REMARK 465 HIS A 25 REMARK 465 GLY A 26 REMARK 465 GLU A 27 REMARK 465 ASN A 28 REMARK 465 LEU A 29 REMARK 465 TYR A 30 REMARK 465 PHE A 31 REMARK 465 GLN A 32 REMARK 465 GLY A 33 REMARK 465 SER A 34 REMARK 465 GLY A 35 REMARK 465 ASP A 98 REMARK 465 ASP A 99 REMARK 465 LYS A 100 REMARK 465 LYS A 132 REMARK 465 LYS A 133 REMARK 465 GLN A 134 REMARK 465 LYS A 135 REMARK 465 ASN A 136 REMARK 465 GLY A 137 REMARK 465 TYR A 138 REMARK 465 GLU A 139 REMARK 465 LYS A 140 REMARK 465 LYS A 141 REMARK 465 LYS A 142 REMARK 465 ILE A 143 REMARK 465 PRO A 144 REMARK 465 ASP A 145 REMARK 465 ALA A 146 REMARK 465 LYS A 213 REMARK 465 ASP A 214 REMARK 465 ASN A 305 REMARK 465 ASP A 306 REMARK 465 GLY A 307 REMARK 465 GLY A 308 REMARK 465 ASN A 309 REMARK 465 VAL A 310 REMARK 465 VAL A 331 REMARK 465 VAL A 332 REMARK 465 SER A 333 REMARK 465 VAL A 334 REMARK 465 GLU A 335 REMARK 465 LYS A 336 REMARK 465 GLU A 337 REMARK 465 LYS A 338 REMARK 465 ASN A 339 REMARK 465 LYS A 340 REMARK 465 LEU A 341 REMARK 465 LYS A 342 REMARK 465 ARG A 343 REMARK 465 LYS A 344 REMARK 465 LYS A 345 REMARK 465 LEU A 346 REMARK 465 GLU A 347 REMARK 465 ASN A 348 REMARK 465 LYS A 349 REMARK 465 ASP A 350 REMARK 465 LYS A 351 REMARK 465 LYS A 352 REMARK 465 ASP A 353 REMARK 465 GLU A 354 REMARK 465 GLU A 355 REMARK 465 LYS A 356 REMARK 465 ASN A 357 REMARK 465 LYS A 358 REMARK 465 ILE A 359 REMARK 465 ARG A 360 REMARK 465 GLY A 457 REMARK 465 SER A 458 REMARK 465 GLU A 459 REMARK 465 GLU A 460 REMARK 465 GLY A 461 REMARK 465 MET A 462 REMARK 465 MET A 477 REMARK 465 THR A 478 REMARK 465 VAL A 479 REMARK 465 THR A 480 REMARK 465 CYS A 481 REMARK 465 PHE A 482 REMARK 465 GLU A 483 REMARK 465 LYS A 484 REMARK 465 SER A 485 REMARK 465 GLU A 486 REMARK 465 GLN A 487 REMARK 465 VAL A 488 REMARK 465 GLN A 489 REMARK 465 GLY A 490 REMARK 465 ALA A 491 REMARK 465 GLN A 492 REMARK 465 LYS A 493 REMARK 465 GLN A 494 REMARK 465 PHE A 495 REMARK 465 LYS A 496 REMARK 465 ASN A 497 REMARK 465 PHE A 498 REMARK 465 GLN A 499 REMARK 465 GLY A 505 REMARK 465 LYS A 527 REMARK 465 LYS A 528 REMARK 465 GLN A 529 REMARK 465 ILE A 530 REMARK 465 LEU A 531 REMARK 465 ARG A 532 REMARK 465 THR A 533 REMARK 465 ASP A 534 REMARK 465 ASN A 535 REMARK 465 ILE A 536 REMARK 465 SER A 537 REMARK 465 PHE A 538 REMARK 465 MET A 539 REMARK 465 LEU A 540 REMARK 465 LYS A 541 REMARK 465 ARG A 542 REMARK 465 CYS A 543 REMARK 465 LYS A 559 REMARK 465 GLY A 560 REMARK 465 ASN A 561 REMARK 465 SER A 562 REMARK 465 GLY B 248 REMARK 465 SER B 249 REMARK 465 GLY B 271 REMARK 465 HIS B 272 REMARK 465 THR B 273 REMARK 465 HIS B 274 REMARK 465 PRO B 275 REMARK 465 VAL B 276 REMARK 465 ALA B 277 REMARK 465 THR B 278 REMARK 465 PHE B 279 REMARK 465 GLN B 280 REMARK 465 PRO B 281 REMARK 465 SER B 282 REMARK 465 ARG B 283 REMARK 465 PRO B 284 REMARK 465 GLU B 285 REMARK 465 SER B 286 REMARK 465 VAL B 287 REMARK 465 ASN B 288 REMARK 465 ASP B 289 REMARK 465 LEU B 290 REMARK 465 PHE B 291 REMARK 465 LEU B 292 REMARK 465 CYS B 293 REMARK 465 PRO B 294 REMARK 465 GLN B 295 REMARK 465 LYS B 296 REMARK 465 GLU B 297 REMARK 465 LEU B 298 REMARK 465 THR B 299 REMARK 465 GLY B 300 REMARK 465 ASN B 301 REMARK 465 SER B 302 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 37 CG CD OE1 OE2 REMARK 470 ASP A 44 CG OD1 OD2 REMARK 470 ARG A 45 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 49 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 54 CG CD OE1 OE2 REMARK 470 GLU A 59 CG CD OE1 OE2 REMARK 470 ARG A 69 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 121 CG OD1 OD2 REMARK 470 ASN A 122 CG OD1 ND2 REMARK 470 GLU A 123 CG CD OE1 OE2 REMARK 470 GLN A 124 CG CD OE1 NE2 REMARK 470 LYS A 177 CG CD CE NZ REMARK 470 GLU A 179 CG CD OE1 OE2 REMARK 470 LYS A 205 CE NZ REMARK 470 GLN A 207 CG CD OE1 NE2 REMARK 470 LYS A 249 CG CD CE NZ REMARK 470 LYS A 254 CG CD CE NZ REMARK 470 ASP A 265 CG OD1 OD2 REMARK 470 LEU A 311 CG CD1 CD2 REMARK 470 LYS A 391 CG CD CE NZ REMARK 470 ASN A 435 CG OD1 ND2 REMARK 470 GLU A 447 CG CD OE1 OE2 REMARK 470 LYS A 452 CG CD CE NZ REMARK 470 LEU A 453 CG CD1 CD2 REMARK 470 ARG A 454 NE CZ NH1 NH2 REMARK 470 GLU A 456 CG CD OE1 OE2 REMARK 470 SER A 468 OG REMARK 470 ILE A 500 CG1 CG2 CD1 REMARK 470 ARG A 506 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 514 CG CD NE CZ NH1 NH2 REMARK 470 SER A 515 OG REMARK 470 PHE A 516 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER A 518 OG REMARK 470 LEU A 522 CG CD1 CD2 REMARK 470 LEU A 526 CG CD1 CD2 REMARK 470 LYS A 547 CG CD CE NZ REMARK 470 ARG A 549 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 550 CG CD OE1 OE2 REMARK 470 LYS B 250 CG CD CE NZ REMARK 470 ARG B 260 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 262 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N VAL A 36 O LEU A 103 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 44 63.61 -112.65 REMARK 500 ALA A 171 76.39 -115.20 REMARK 500 LYS A 205 16.74 59.07 REMARK 500 LYS A 254 -74.34 -101.85 REMARK 500 MET A 299 76.66 -155.56 REMARK 500 GLU A 379 -123.90 63.00 REMARK 500 ASN A 389 11.64 59.92 REMARK 500 ALA A 417 -89.52 -100.31 REMARK 500 VAL A 427 28.66 -140.79 REMARK 500 HIS A 441 -164.87 -77.07 REMARK 500 ARG A 466 -154.19 -131.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CIT A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5IXI RELATED DB: PDB DBREF 5IXD A 35 559 UNP P23458 JAK1_HUMAN 35 559 DBREF 5IXD B 250 299 UNP Q8IU57 INLR1_HUMAN 250 299 SEQADV 5IXD MET A 19 UNP P23458 INITIATING METHIONINE SEQADV 5IXD HIS A 20 UNP P23458 EXPRESSION TAG SEQADV 5IXD HIS A 21 UNP P23458 EXPRESSION TAG SEQADV 5IXD HIS A 22 UNP P23458 EXPRESSION TAG SEQADV 5IXD HIS A 23 UNP P23458 EXPRESSION TAG SEQADV 5IXD HIS A 24 UNP P23458 EXPRESSION TAG SEQADV 5IXD HIS A 25 UNP P23458 EXPRESSION TAG SEQADV 5IXD GLY A 26 UNP P23458 EXPRESSION TAG SEQADV 5IXD GLU A 27 UNP P23458 EXPRESSION TAG SEQADV 5IXD ASN A 28 UNP P23458 EXPRESSION TAG SEQADV 5IXD LEU A 29 UNP P23458 EXPRESSION TAG SEQADV 5IXD TYR A 30 UNP P23458 EXPRESSION TAG SEQADV 5IXD PHE A 31 UNP P23458 EXPRESSION TAG SEQADV 5IXD GLN A 32 UNP P23458 EXPRESSION TAG SEQADV 5IXD GLY A 33 UNP P23458 EXPRESSION TAG SEQADV 5IXD SER A 34 UNP P23458 EXPRESSION TAG SEQADV 5IXD ASP A 350 UNP P23458 HIS 350 CONFLICT SEQADV 5IXD PHE A 368 UNP P23458 TYR 368 CONFLICT SEQADV 5IXD GLY A 560 UNP P23458 EXPRESSION TAG SEQADV 5IXD ASN A 561 UNP P23458 EXPRESSION TAG SEQADV 5IXD SER A 562 UNP P23458 EXPRESSION TAG SEQADV 5IXD GLY B 248 UNP Q8IU57 EXPRESSION TAG SEQADV 5IXD SER B 249 UNP Q8IU57 EXPRESSION TAG SEQADV 5IXD GLY B 300 UNP Q8IU57 EXPRESSION TAG SEQADV 5IXD ASN B 301 UNP Q8IU57 EXPRESSION TAG SEQADV 5IXD SER B 302 UNP Q8IU57 EXPRESSION TAG SEQRES 1 A 544 MET HIS HIS HIS HIS HIS HIS GLY GLU ASN LEU TYR PHE SEQRES 2 A 544 GLN GLY SER GLY VAL GLU VAL ILE PHE TYR LEU SER ASP SEQRES 3 A 544 ARG GLU PRO LEU ARG LEU GLY SER GLY GLU TYR THR ALA SEQRES 4 A 544 GLU GLU LEU CYS ILE ARG ALA ALA GLN ALA CYS ARG ILE SEQRES 5 A 544 SER PRO LEU CYS HIS ASN LEU PHE ALA LEU TYR ASP GLU SEQRES 6 A 544 ASN THR LYS LEU TRP TYR ALA PRO ASN ARG THR ILE THR SEQRES 7 A 544 VAL ASP ASP LYS MET SER LEU ARG LEU HIS TYR ARG MET SEQRES 8 A 544 ARG PHE TYR PHE THR ASN TRP HIS GLY THR ASN ASP ASN SEQRES 9 A 544 GLU GLN SER VAL TRP ARG HIS SER PRO LYS LYS GLN LYS SEQRES 10 A 544 ASN GLY TYR GLU LYS LYS LYS ILE PRO ASP ALA THR PRO SEQRES 11 A 544 LEU LEU ASP ALA SER SER LEU GLU TYR LEU PHE ALA GLN SEQRES 12 A 544 GLY GLN TYR ASP LEU VAL LYS CYS LEU ALA PRO ILE ARG SEQRES 13 A 544 ASP PRO LYS THR GLU GLN ASP GLY HIS ASP ILE GLU ASN SEQRES 14 A 544 GLU CYS LEU GLY MET ALA VAL LEU ALA ILE SER HIS TYR SEQRES 15 A 544 ALA MET MET LYS LYS MET GLN LEU PRO GLU LEU PRO LYS SEQRES 16 A 544 ASP ILE SER TYR LYS ARG TYR ILE PRO GLU THR LEU ASN SEQRES 17 A 544 LYS SER ILE ARG GLN ARG ASN LEU LEU THR ARG MET ARG SEQRES 18 A 544 ILE ASN ASN VAL PHE LYS ASP PHE LEU LYS GLU PHE ASN SEQRES 19 A 544 ASN LYS THR ILE CYS ASP SER SER VAL SER THR HIS ASP SEQRES 20 A 544 LEU LYS VAL LYS TYR LEU ALA THR LEU GLU THR LEU THR SEQRES 21 A 544 LYS HIS TYR GLY ALA GLU ILE PHE GLU THR SER MET LEU SEQRES 22 A 544 LEU ILE SER SER GLU ASN GLU MET ASN TRP PHE HIS SER SEQRES 23 A 544 ASN ASP GLY GLY ASN VAL LEU TYR TYR GLU VAL MET VAL SEQRES 24 A 544 THR GLY ASN LEU GLY ILE GLN TRP ARG HIS LYS PRO ASN SEQRES 25 A 544 VAL VAL SER VAL GLU LYS GLU LYS ASN LYS LEU LYS ARG SEQRES 26 A 544 LYS LYS LEU GLU ASN LYS ASP LYS LYS ASP GLU GLU LYS SEQRES 27 A 544 ASN LYS ILE ARG GLU GLU TRP ASN ASN PHE SER PHE PHE SEQRES 28 A 544 PRO GLU ILE THR HIS ILE VAL ILE LYS GLU SER VAL VAL SEQRES 29 A 544 SER ILE ASN LYS GLN ASP ASN LYS LYS MET GLU LEU LYS SEQRES 30 A 544 LEU SER SER HIS GLU GLU ALA LEU SER PHE VAL SER LEU SEQRES 31 A 544 VAL ASP GLY TYR PHE ARG LEU THR ALA ASP ALA HIS HIS SEQRES 32 A 544 TYR LEU CYS THR ASP VAL ALA PRO PRO LEU ILE VAL HIS SEQRES 33 A 544 ASN ILE GLN ASN GLY CYS HIS GLY PRO ILE CYS THR GLU SEQRES 34 A 544 TYR ALA ILE ASN LYS LEU ARG GLN GLU GLY SER GLU GLU SEQRES 35 A 544 GLY MET TYR VAL LEU ARG TRP SER CYS THR ASP PHE ASP SEQRES 36 A 544 ASN ILE LEU MET THR VAL THR CYS PHE GLU LYS SER GLU SEQRES 37 A 544 GLN VAL GLN GLY ALA GLN LYS GLN PHE LYS ASN PHE GLN SEQRES 38 A 544 ILE GLU VAL GLN LYS GLY ARG TYR SER LEU HIS GLY SER SEQRES 39 A 544 ASP ARG SER PHE PRO SER LEU GLY ASP LEU MET SER HIS SEQRES 40 A 544 LEU LYS LYS GLN ILE LEU ARG THR ASP ASN ILE SER PHE SEQRES 41 A 544 MET LEU LYS ARG CYS CYS GLN PRO LYS PRO ARG GLU ILE SEQRES 42 A 544 SER ASN LEU LEU VAL ALA THR LYS GLY ASN SER SEQRES 1 B 55 GLY SER LYS THR LEU MET GLY ASN PRO TRP PHE GLN ARG SEQRES 2 B 55 ALA LYS MET PRO ARG ALA LEU ASP PHE SER GLY HIS THR SEQRES 3 B 55 HIS PRO VAL ALA THR PHE GLN PRO SER ARG PRO GLU SER SEQRES 4 B 55 VAL ASN ASP LEU PHE LEU CYS PRO GLN LYS GLU LEU THR SEQRES 5 B 55 GLY ASN SER HET CIT A 601 13 HETNAM CIT CITRIC ACID FORMUL 3 CIT C6 H8 O7 HELIX 1 AA1 ALA A 57 CYS A 68 1 12 HELIX 2 AA2 LEU A 73 ASN A 76 5 4 HELIX 3 AA3 ASP A 151 LYS A 168 1 18 HELIX 4 AA4 THR A 178 LYS A 204 1 27 HELIX 5 AA5 SER A 216 TYR A 220 5 5 HELIX 6 AA6 PRO A 222 GLN A 231 1 10 HELIX 7 AA7 ASN A 233 LYS A 254 1 22 HELIX 8 AA8 LYS A 254 SER A 259 1 6 HELIX 9 AA9 SER A 262 THR A 278 1 17 HELIX 10 AB1 PHE A 368 PRO A 370 5 3 HELIX 11 AB2 SER A 398 ALA A 417 1 20 HELIX 12 AB3 CYS A 424 ALA A 428 5 5 HELIX 13 AB4 PRO A 429 ASN A 438 1 10 HELIX 14 AB5 CYS A 445 GLN A 455 1 11 HELIX 15 AB6 SER A 518 HIS A 525 1 8 HELIX 16 AB7 ASN B 255 GLN B 259 5 5 HELIX 17 AB8 PRO B 264 ASP B 268 5 5 SHEET 1 AA1 5 LEU A 48 ARG A 49 0 SHEET 2 AA1 5 GLU A 37 ILE A 39 -1 N VAL A 38 O LEU A 48 SHEET 3 AA1 5 ARG A 104 MET A 109 1 O LEU A 105 N ILE A 39 SHEET 4 AA1 5 PHE A 78 ASP A 82 -1 N TYR A 81 O HIS A 106 SHEET 5 AA1 5 LEU A 87 TRP A 88 -1 O LEU A 87 N ASP A 82 SHEET 1 AA2 2 GLU A 54 THR A 56 0 SHEET 2 AA2 2 THR A 94 THR A 96 -1 O ILE A 95 N TYR A 55 SHEET 1 AA3 5 GLU A 298 SER A 304 0 SHEET 2 AA3 5 GLU A 284 SER A 295 -1 N LEU A 291 O PHE A 302 SHEET 3 AA3 5 TYR A 312 THR A 318 -1 O VAL A 315 N PHE A 286 SHEET 4 AA3 5 GLY A 322 HIS A 327 -1 O GLN A 324 N MET A 316 SHEET 5 AA3 5 ASN A 364 SER A 367 -1 O ASN A 364 N TRP A 325 SHEET 1 AA4 5 GLU A 298 SER A 304 0 SHEET 2 AA4 5 GLU A 284 SER A 295 -1 N LEU A 291 O PHE A 302 SHEET 3 AA4 5 LYS A 391 LYS A 395 -1 O LYS A 391 N SER A 294 SHEET 4 AA4 5 VAL A 381 LYS A 386 -1 N ILE A 384 O MET A 392 SHEET 5 AA4 5 ILE A 372 LYS A 378 -1 N VAL A 376 O SER A 383 SHEET 1 AA5 2 GLU A 501 VAL A 502 0 SHEET 2 AA5 2 TYR A 507 SER A 508 -1 O SER A 508 N GLU A 501 SITE 1 AC1 6 LYS A 218 ARG A 230 LEU A 234 ARG A 237 SITE 2 AC1 6 MET A 238 ASN A 241 CRYST1 111.170 193.200 72.980 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008995 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005176 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013702 0.00000