HEADER LYASE/LYASE INHIBITOR 04-JUL-14 4QSJ TITLE CRYSTAL STRUCTURE OF HUMAN CARBONIC ANHYDRASE ISOZYME XIII WITH 2- TITLE 2 CHLORO-4-{[(4-METHYL-6-OXO-1,6-DIHYDROPYRIMIDIN-2-YL) TITLE 3 THIO]ACETYL}BENZENESULFONAMIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBONIC ANHYDRASE 13; COMPND 3 CHAIN: B, A; COMPND 4 SYNONYM: CARBONATE DEHYDRATASE XIII, CARBONIC ANHYDRASE XIII, CA- COMPND 5 XIII; COMPND 6 EC: 4.2.1.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CA13; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS DRUG DESIGN, CARBONIC ANHYDRASE, BENZENESULFONAMIDE, METAL-BINDING, KEYWDS 2 LYASE-LYASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.SMIRNOV,E.MANAKOVA,S.GRAZULIS REVDAT 2 08-NOV-23 4QSJ 1 REMARK SEQADV LINK REVDAT 1 21-JAN-15 4QSJ 0 JRNL AUTH M.KISONAITE,A.ZUBRIENE,E.CAPKAUSKAITE,A.SMIRNOV, JRNL AUTH 2 J.SMIRNOVIENE,V.KAIRYS,V.MICHAILOVIENE,E.MANAKOVA, JRNL AUTH 3 S.GRAZULIS,D.MATULIS JRNL TITL INTRINSIC THERMODYNAMICS AND STRUCTURE CORRELATION OF JRNL TITL 2 BENZENESULFONAMIDES WITH A PYRIMIDINE MOIETY BINDING TO JRNL TITL 3 CARBONIC ANHYDRASES I, II, VII, XII, AND XIII JRNL REF PLOS ONE V. 9 14106 2014 JRNL REFN ESSN 1932-6203 JRNL PMID 25493428 JRNL DOI 10.1371/JOURNAL.PONE.0114106 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 52172 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 5865 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3806 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.18 REMARK 3 BIN R VALUE (WORKING SET) : 0.2750 REMARK 3 BIN FREE R VALUE SET COUNT : 420 REMARK 3 BIN FREE R VALUE : 0.3220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4127 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 101 REMARK 3 SOLVENT ATOMS : 543 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26000 REMARK 3 B22 (A**2) : 0.24000 REMARK 3 B33 (A**2) : -0.50000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.113 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.111 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4535 ; 0.025 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6199 ; 2.278 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 551 ; 6.771 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 208 ;33.936 ;24.135 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 713 ;14.045 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;12.763 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 644 ; 0.192 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3576 ; 0.013 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4QSJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1000086458. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X13 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8123 REMARK 200 MONOCHROMATOR : SI (111), HORIZONTALLY FOCUSSING REMARK 200 OPTICS : MIRROR BENT, VERTICALLY REMARK 200 FOCUSSING REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.19 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57690 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.629 REMARK 200 RESOLUTION RANGE LOW (A) : 39.112 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 18.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.37700 REMARK 200 R SYM FOR SHELL (I) : 0.37700 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2NNO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE (PH 5.5), 0.2M REMARK 280 SODIUM ACETATE (PH 4.5), 28% PEG 4000, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.33000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.03850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.89000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 80.03850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.33000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.89000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B -1 REMARK 465 MET B 0 REMARK 465 SER B 1 REMARK 465 ARG B 2 REMARK 465 LEU B 3 REMARK 465 MET A -1 REMARK 465 MET A 0 REMARK 465 SER A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 65 -177.43 -173.92 REMARK 500 ASN B 75 42.86 -95.45 REMARK 500 HIS B 103 75.57 -152.15 REMARK 500 ASN B 244 42.81 -153.72 REMARK 500 LEU A 3 44.69 -99.05 REMARK 500 SER A 4 24.37 -165.37 REMARK 500 SER A 65 -175.18 -171.21 REMARK 500 PHE A 176 89.54 -158.38 REMARK 500 ASN A 244 44.56 -151.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 94 NE2 REMARK 620 2 HIS B 96 NE2 101.0 REMARK 620 3 HIS B 119 ND1 114.9 97.7 REMARK 620 4 EWW B 302 N11 114.7 111.7 114.6 REMARK 620 5 EWW B 302 N11 107.5 108.1 124.3 9.7 REMARK 620 6 EWW B 302 O8 85.0 172.9 83.0 62.0 66.1 REMARK 620 7 EWW B 302 S6 99.8 143.4 100.4 31.7 36.2 30.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 94 NE2 REMARK 620 2 HIS A 96 NE2 104.9 REMARK 620 3 HIS A 119 ND1 113.7 95.2 REMARK 620 4 EWW A 302 N11 112.9 108.4 119.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EWW B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT B 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EWW A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4QSA RELATED DB: PDB REMARK 900 RELATED ID: 4QSB RELATED DB: PDB REMARK 900 RELATED ID: 4QSI RELATED DB: PDB DBREF 4QSJ B 0 261 UNP Q8N1Q1 CAH13_HUMAN 1 262 DBREF 4QSJ A 0 261 UNP Q8N1Q1 CAH13_HUMAN 1 262 SEQADV 4QSJ MET B -1 UNP Q8N1Q1 EXPRESSION TAG SEQADV 4QSJ MET A -1 UNP Q8N1Q1 EXPRESSION TAG SEQRES 1 B 263 MET MET SER ARG LEU SER TRP GLY TYR ARG GLU HIS ASN SEQRES 2 B 263 GLY PRO ILE HIS TRP LYS GLU PHE PHE PRO ILE ALA ASP SEQRES 3 B 263 GLY ASP GLN GLN SER PRO ILE GLU ILE LYS THR LYS GLU SEQRES 4 B 263 VAL LYS TYR ASP SER SER LEU ARG PRO LEU SER ILE LYS SEQRES 5 B 263 TYR ASP PRO SER SER ALA LYS ILE ILE SER ASN SER GLY SEQRES 6 B 263 HIS SER PHE ASN VAL ASP PHE ASP ASP THR GLU ASN LYS SEQRES 7 B 263 SER VAL LEU ARG GLY GLY PRO LEU THR GLY SER TYR ARG SEQRES 8 B 263 LEU ARG GLN VAL HIS LEU HIS TRP GLY SER ALA ASP ASP SEQRES 9 B 263 HIS GLY SER GLU HIS ILE VAL ASP GLY VAL SER TYR ALA SEQRES 10 B 263 ALA GLU LEU HIS VAL VAL HIS TRP ASN SER ASP LYS TYR SEQRES 11 B 263 PRO SER PHE VAL GLU ALA ALA HIS GLU PRO ASP GLY LEU SEQRES 12 B 263 ALA VAL LEU GLY VAL PHE LEU GLN ILE GLY GLU PRO ASN SEQRES 13 B 263 SER GLN LEU GLN LYS ILE THR ASP THR LEU ASP SER ILE SEQRES 14 B 263 LYS GLU LYS GLY LYS GLN THR ARG PHE THR ASN PHE ASP SEQRES 15 B 263 LEU LEU SER LEU LEU PRO PRO SER TRP ASP TYR TRP THR SEQRES 16 B 263 TYR PRO GLY SER LEU THR VAL PRO PRO LEU LEU GLU SER SEQRES 17 B 263 VAL THR TRP ILE VAL LEU LYS GLN PRO ILE ASN ILE SER SEQRES 18 B 263 SER GLN GLN LEU ALA LYS PHE ARG SER LEU LEU CYS THR SEQRES 19 B 263 ALA GLU GLY GLU ALA ALA ALA PHE LEU VAL SER ASN HIS SEQRES 20 B 263 ARG PRO PRO GLN PRO LEU LYS GLY ARG LYS VAL ARG ALA SEQRES 21 B 263 SER PHE HIS SEQRES 1 A 263 MET MET SER ARG LEU SER TRP GLY TYR ARG GLU HIS ASN SEQRES 2 A 263 GLY PRO ILE HIS TRP LYS GLU PHE PHE PRO ILE ALA ASP SEQRES 3 A 263 GLY ASP GLN GLN SER PRO ILE GLU ILE LYS THR LYS GLU SEQRES 4 A 263 VAL LYS TYR ASP SER SER LEU ARG PRO LEU SER ILE LYS SEQRES 5 A 263 TYR ASP PRO SER SER ALA LYS ILE ILE SER ASN SER GLY SEQRES 6 A 263 HIS SER PHE ASN VAL ASP PHE ASP ASP THR GLU ASN LYS SEQRES 7 A 263 SER VAL LEU ARG GLY GLY PRO LEU THR GLY SER TYR ARG SEQRES 8 A 263 LEU ARG GLN VAL HIS LEU HIS TRP GLY SER ALA ASP ASP SEQRES 9 A 263 HIS GLY SER GLU HIS ILE VAL ASP GLY VAL SER TYR ALA SEQRES 10 A 263 ALA GLU LEU HIS VAL VAL HIS TRP ASN SER ASP LYS TYR SEQRES 11 A 263 PRO SER PHE VAL GLU ALA ALA HIS GLU PRO ASP GLY LEU SEQRES 12 A 263 ALA VAL LEU GLY VAL PHE LEU GLN ILE GLY GLU PRO ASN SEQRES 13 A 263 SER GLN LEU GLN LYS ILE THR ASP THR LEU ASP SER ILE SEQRES 14 A 263 LYS GLU LYS GLY LYS GLN THR ARG PHE THR ASN PHE ASP SEQRES 15 A 263 LEU LEU SER LEU LEU PRO PRO SER TRP ASP TYR TRP THR SEQRES 16 A 263 TYR PRO GLY SER LEU THR VAL PRO PRO LEU LEU GLU SER SEQRES 17 A 263 VAL THR TRP ILE VAL LEU LYS GLN PRO ILE ASN ILE SER SEQRES 18 A 263 SER GLN GLN LEU ALA LYS PHE ARG SER LEU LEU CYS THR SEQRES 19 A 263 ALA GLU GLY GLU ALA ALA ALA PHE LEU VAL SER ASN HIS SEQRES 20 A 263 ARG PRO PRO GLN PRO LEU LYS GLY ARG LYS VAL ARG ALA SEQRES 21 A 263 SER PHE HIS HET ZN B 301 1 HET EWW B 302 46 HET PEG B 303 7 HET DMS B 304 4 HET CIT B 305 13 HET PEG B 306 7 HET EDO B 307 4 HET CIT B 308 13 HET EDO B 309 4 HET ZN A 301 1 HET EWW A 302 23 HET NI A 303 1 HETNAM ZN ZINC ION HETNAM EWW 2-CHLORO-4-{[(4-METHYL-6-OXO-1,6-DIHYDROPYRIMIDIN-2- HETNAM 2 EWW YL)SULFANYL]ACETYL}BENZENESULFONAMIDE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM DMS DIMETHYL SULFOXIDE HETNAM CIT CITRIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM NI NICKEL (II) ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 ZN 2(ZN 2+) FORMUL 4 EWW 2(C13 H12 CL N3 O4 S2) FORMUL 5 PEG 2(C4 H10 O3) FORMUL 6 DMS C2 H6 O S FORMUL 7 CIT 2(C6 H8 O7) FORMUL 9 EDO 2(C2 H6 O2) FORMUL 14 NI NI 2+ FORMUL 15 HOH *543(H2 O) HELIX 1 1 GLY B 12 ILE B 14 5 3 HELIX 2 2 HIS B 15 PHE B 20 1 6 HELIX 3 3 PRO B 21 GLY B 25 5 5 HELIX 4 4 LYS B 34 VAL B 38 5 5 HELIX 5 5 SER B 130 ALA B 135 1 6 HELIX 6 6 ASN B 154 ASP B 162 1 9 HELIX 7 7 THR B 163 LYS B 168 5 6 HELIX 8 8 ASP B 180 LEU B 185 1 6 HELIX 9 9 SER B 219 ARG B 227 1 9 HELIX 10 10 GLY A 12 PHE A 19 5 8 HELIX 11 11 PHE A 20 GLY A 25 5 6 HELIX 12 12 LYS A 34 VAL A 38 5 5 HELIX 13 13 ASP A 52 SER A 54 5 3 HELIX 14 14 SER A 130 ALA A 135 1 6 HELIX 15 15 ASN A 154 GLN A 156 5 3 HELIX 16 16 LEU A 157 ASP A 162 1 6 HELIX 17 17 THR A 163 LYS A 168 5 6 HELIX 18 18 LEU A 181 LEU A 185 5 5 HELIX 19 19 SER A 219 ARG A 227 1 9 SHEET 1 A 2 GLU B 32 ILE B 33 0 SHEET 2 A 2 ILE B 108 VAL B 109 1 O ILE B 108 N ILE B 33 SHEET 1 B10 LYS B 39 TYR B 40 0 SHEET 2 B10 ARG B 257 ALA B 258 1 O ALA B 258 N LYS B 39 SHEET 3 B10 TYR B 191 GLY B 196 -1 N THR B 193 O ARG B 257 SHEET 4 B10 VAL B 207 LEU B 212 -1 O VAL B 207 N GLY B 196 SHEET 5 B10 LEU B 141 ILE B 150 1 N GLY B 145 O ILE B 210 SHEET 6 B10 ALA B 116 ASN B 124 -1 N LEU B 118 O VAL B 146 SHEET 7 B10 TYR B 88 TRP B 97 -1 N ARG B 89 O TRP B 123 SHEET 8 B10 PHE B 66 PHE B 70 -1 N VAL B 68 O VAL B 93 SHEET 9 B10 ALA B 56 ASN B 61 -1 N ILE B 58 O ASP B 69 SHEET 10 B10 GLN B 173 ARG B 175 -1 O THR B 174 N ILE B 59 SHEET 1 C 6 LEU B 47 LYS B 50 0 SHEET 2 C 6 VAL B 78 GLY B 81 -1 O ARG B 80 N SER B 48 SHEET 3 C 6 TYR B 88 TRP B 97 -1 O TYR B 88 N LEU B 79 SHEET 4 C 6 ALA B 116 ASN B 124 -1 O TRP B 123 N ARG B 89 SHEET 5 C 6 LEU B 141 ILE B 150 -1 O VAL B 146 N LEU B 118 SHEET 6 C 6 ILE B 216 ILE B 218 1 O ILE B 216 N GLN B 149 SHEET 1 D 2 GLU A 32 ILE A 33 0 SHEET 2 D 2 ILE A 108 VAL A 109 1 O ILE A 108 N ILE A 33 SHEET 1 E10 LYS A 39 TYR A 40 0 SHEET 2 E10 ARG A 257 ALA A 258 1 O ALA A 258 N LYS A 39 SHEET 3 E10 TYR A 191 GLY A 196 -1 N THR A 193 O ARG A 257 SHEET 4 E10 VAL A 207 LEU A 212 -1 O VAL A 207 N GLY A 196 SHEET 5 E10 LEU A 141 ILE A 150 1 N GLY A 145 O LEU A 212 SHEET 6 E10 ALA A 116 ASN A 124 -1 N LEU A 118 O VAL A 146 SHEET 7 E10 TYR A 88 TRP A 97 -1 N ARG A 89 O TRP A 123 SHEET 8 E10 PHE A 66 PHE A 70 -1 N VAL A 68 O VAL A 93 SHEET 9 E10 ALA A 56 ASN A 61 -1 N LYS A 57 O ASP A 69 SHEET 10 E10 GLN A 173 ARG A 175 -1 O THR A 174 N ILE A 59 SHEET 1 F 6 ARG A 45 LYS A 50 0 SHEET 2 F 6 VAL A 78 GLY A 82 -1 O ARG A 80 N SER A 48 SHEET 3 F 6 TYR A 88 TRP A 97 -1 O TYR A 88 N LEU A 79 SHEET 4 F 6 ALA A 116 ASN A 124 -1 O TRP A 123 N ARG A 89 SHEET 5 F 6 LEU A 141 ILE A 150 -1 O VAL A 146 N LEU A 118 SHEET 6 F 6 ILE A 216 ILE A 218 1 O ILE A 216 N GLN A 149 LINK NE2 HIS B 94 ZN ZN B 301 1555 1555 1.96 LINK NE2 HIS B 96 ZN ZN B 301 1555 1555 2.12 LINK ND1 HIS B 119 ZN ZN B 301 1555 1555 2.07 LINK ZN ZN B 301 N11BEWW B 302 1555 1555 1.72 LINK ZN ZN B 301 N11AEWW B 302 1555 1555 1.87 LINK ZN ZN B 301 O8 AEWW B 302 1555 1555 2.66 LINK ZN ZN B 301 S6 AEWW B 302 1555 1555 2.98 LINK NE2 HIS A 94 ZN ZN A 301 1555 1555 2.00 LINK NE2 HIS A 96 ZN ZN A 301 1555 1555 2.08 LINK ND1 HIS A 119 ZN ZN A 301 1555 1555 2.02 LINK ZN ZN A 301 N11 EWW A 302 1555 1555 1.84 CISPEP 1 SER B 29 PRO B 30 0 0.65 CISPEP 2 PRO B 201 PRO B 202 0 12.89 CISPEP 3 SER A 29 PRO A 30 0 -1.39 CISPEP 4 PRO A 201 PRO A 202 0 12.86 SITE 1 AC1 5 HIS B 94 HIS B 96 HIS B 119 THR B 199 SITE 2 AC1 5 EWW B 302 SITE 1 AC2 19 ARG B 91 GLN B 92 HIS B 94 HIS B 96 SITE 2 AC2 19 HIS B 119 VAL B 121 PHE B 131 VAL B 132 SITE 3 AC2 19 VAL B 143 SER B 197 LEU B 198 THR B 199 SITE 4 AC2 19 VAL B 200 PRO B 202 VAL B 207 TRP B 209 SITE 5 AC2 19 ZN B 301 HOH B 640 HOH B 667 SITE 1 AC3 6 ASP A 26 GLN A 27 LYS A 252 ARG A 254 SITE 2 AC3 6 LYS B 57 ARG B 175 SITE 1 AC4 1 ASP B 139 SITE 1 AC5 9 ASP A 126 HOH A 602 GLY B 98 SER B 99 SITE 2 AC5 9 HIS B 103 SER B 243 HIS B 245 HOH B 437 SITE 3 AC5 9 HOH B 534 SITE 1 AC6 9 THR A 73 GLU A 74 ASP B 101 ASP B 102 SITE 2 AC6 9 ILE B 150 SER B 220 HOH B 536 HOH B 631 SITE 3 AC6 9 HOH B 678 SITE 1 AC7 4 ARG A 80 PRO B 187 SER B 188 HOH B 603 SITE 1 AC8 14 LYS B 36 GLU B 37 ASP B 110 GLN B 158 SITE 2 AC8 14 THR B 161 ASP B 162 GLN B 221 GLN B 222 SITE 3 AC8 14 LYS B 225 HOH B 449 HOH B 471 HOH B 549 SITE 4 AC8 14 HOH B 589 HOH B 608 SITE 1 AC9 7 ASN B 154 SER B 155 GLN B 156 SER B 183 SITE 2 AC9 7 HOH B 432 HOH B 452 HOH B 680 SITE 1 BC1 4 HIS A 94 HIS A 96 HIS A 119 EWW A 302 SITE 1 BC2 15 HIS A 94 HIS A 96 HIS A 119 PHE A 131 SITE 2 BC2 15 VAL A 132 HIS A 136 VAL A 143 LEU A 198 SITE 3 BC2 15 THR A 199 VAL A 200 TRP A 209 ZN A 301 SITE 4 BC2 15 HOH A 597 HOH A 637 HOH A 638 SITE 1 BC3 4 SER A 99 HIS A 103 SER A 243 HIS A 245 CRYST1 56.660 57.780 160.077 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017649 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017307 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006247 0.00000