HEADER PHOTOSYNTHESIS 23-APR-14 4Q70 TITLE LIGHT HARVESTING PROTEIN PHYCOCYANIN IN HIGH RESOLUTION USING A TITLE 2 FEMTOSECOND X-RAY LASER CAVEAT 4Q70 CHIRALITY ERROR ON C4C CENTER OF CYC 201 A LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: C-PHYCOCYANIN ALPHA CHAIN; COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: C-PHYCOCYANIN BETA CHAIN; COMPND 6 CHAIN: B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS ELONGATUS; SOURCE 3 ORGANISM_TAXID: 197221; SOURCE 4 STRAIN: BP-1; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: THERMOSYNECHOCOCCUS ELONGATUS; SOURCE 7 ORGANISM_TAXID: 197221; SOURCE 8 STRAIN: BP-1 KEYWDS FEMTOSECOND CRYSTALLOGRAPHY PHYCOCYANIN PHOTOSYNTHESIS, KEYWDS 2 PHYCOBILISOME, PHOTOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR R.FROMME,S.ROY-CHOWDHURY,S.BASU,C.YOON,P.FROMME REVDAT 2 14-FEB-18 4Q70 1 REMARK REVDAT 1 06-MAY-15 4Q70 0 JRNL AUTH R.FROMME,S.ROY-CHOWDHURY,S.BASU,C.YOON,D.BRUNE,P.FROMME JRNL TITL OBSERVATIONS ON THE LIGHT HARVESTING PROTEIN PHYCOCYANIN JRNL TITL 2 STRUCTURE IN HIGH RESOLUTION USING A FEMTOSECOND X-RAY LASER JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1675 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 37798 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.160 REMARK 3 FREE R VALUE TEST SET COUNT : 1952 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.4428 - 4.4563 1.00 2635 152 0.1291 0.2027 REMARK 3 2 4.4563 - 3.5381 1.00 2568 150 0.1253 0.1717 REMARK 3 3 3.5381 - 3.0911 1.00 2585 139 0.1529 0.2303 REMARK 3 4 3.0911 - 2.8086 1.00 2553 146 0.1825 0.2679 REMARK 3 5 2.8086 - 2.6073 1.00 2553 140 0.2051 0.2630 REMARK 3 6 2.6073 - 2.4537 1.00 2555 146 0.2243 0.3313 REMARK 3 7 2.4537 - 2.3308 1.00 2551 132 0.2401 0.3276 REMARK 3 8 2.3308 - 2.2294 1.00 2566 135 0.2555 0.3233 REMARK 3 9 2.2294 - 2.1435 1.00 2545 136 0.2656 0.3339 REMARK 3 10 2.1435 - 2.0696 1.00 2565 109 0.2944 0.3726 REMARK 3 11 2.0696 - 2.0049 1.00 2546 147 0.3164 0.3906 REMARK 3 12 2.0049 - 1.9476 1.00 2524 147 0.3336 0.4144 REMARK 3 13 1.9476 - 1.8963 1.00 2556 143 0.3452 0.4119 REMARK 3 14 1.8963 - 1.8500 1.00 2544 130 0.3552 0.4237 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 2674 REMARK 3 ANGLE : 1.425 3636 REMARK 3 CHIRALITY : 0.056 402 REMARK 3 PLANARITY : 0.005 470 REMARK 3 DIHEDRAL : 17.703 954 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.5386 -24.2158 -36.8612 REMARK 3 T TENSOR REMARK 3 T11: 0.1230 T22: 0.1503 REMARK 3 T33: 0.2243 T12: 0.0350 REMARK 3 T13: -0.0253 T23: -0.0589 REMARK 3 L TENSOR REMARK 3 L11: 0.0711 L22: 0.1858 REMARK 3 L33: 0.4150 L12: 0.1169 REMARK 3 L13: -0.1698 L23: -0.2792 REMARK 3 S TENSOR REMARK 3 S11: -0.0992 S12: -0.0894 S13: 0.1075 REMARK 3 S21: 0.0559 S22: -0.1235 S23: -0.1182 REMARK 3 S31: -0.1438 S32: 0.0453 S33: -0.0599 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 21 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.1464 -23.7783 -38.0924 REMARK 3 T TENSOR REMARK 3 T11: 0.1496 T22: 0.2070 REMARK 3 T33: 0.2600 T12: -0.0015 REMARK 3 T13: -0.0234 T23: -0.0226 REMARK 3 L TENSOR REMARK 3 L11: 0.2463 L22: 0.1064 REMARK 3 L33: 0.0443 L12: 0.0190 REMARK 3 L13: -0.0205 L23: -0.1000 REMARK 3 S TENSOR REMARK 3 S11: -0.0308 S12: -0.1352 S13: -0.1173 REMARK 3 S21: -0.0191 S22: 0.0489 S23: 0.0946 REMARK 3 S31: -0.0098 S32: 0.0115 S33: 0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.6530 -13.0251 -38.0635 REMARK 3 T TENSOR REMARK 3 T11: 0.1581 T22: 0.1642 REMARK 3 T33: 0.1857 T12: 0.0022 REMARK 3 T13: -0.0059 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 0.4230 L22: 0.3543 REMARK 3 L33: 0.4626 L12: 0.1237 REMARK 3 L13: -0.0425 L23: 0.1725 REMARK 3 S TENSOR REMARK 3 S11: -0.0138 S12: -0.0266 S13: -0.1399 REMARK 3 S21: -0.0097 S22: 0.0070 S23: 0.1726 REMARK 3 S31: -0.0763 S32: 0.0212 S33: -0.0009 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 20 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.8404 -34.5988 -12.4284 REMARK 3 T TENSOR REMARK 3 T11: 0.1595 T22: 0.1758 REMARK 3 T33: 0.0288 T12: 0.0237 REMARK 3 T13: 0.0882 T23: 0.1126 REMARK 3 L TENSOR REMARK 3 L11: 0.3862 L22: 0.0163 REMARK 3 L33: 0.1244 L12: 0.0647 REMARK 3 L13: -0.2074 L23: -0.0220 REMARK 3 S TENSOR REMARK 3 S11: 0.1327 S12: -0.1515 S13: 0.0872 REMARK 3 S21: 0.0712 S22: 0.0044 S23: 0.1191 REMARK 3 S31: -0.2558 S32: 0.0370 S33: 0.2691 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 21 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.8643 -18.0216 -14.2724 REMARK 3 T TENSOR REMARK 3 T11: 0.1478 T22: 0.2095 REMARK 3 T33: 0.1666 T12: 0.0161 REMARK 3 T13: 0.0289 T23: 0.0213 REMARK 3 L TENSOR REMARK 3 L11: 0.0808 L22: 0.7704 REMARK 3 L33: 0.0506 L12: -0.2092 REMARK 3 L13: -0.0945 L23: 0.1770 REMARK 3 S TENSOR REMARK 3 S11: -0.0813 S12: 0.0328 S13: -0.1668 REMARK 3 S21: 0.1059 S22: -0.1105 S23: 0.1923 REMARK 3 S31: -0.0352 S32: 0.0661 S33: -0.2179 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 76 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.2225 -9.5555 -17.2182 REMARK 3 T TENSOR REMARK 3 T11: 0.1039 T22: 0.2468 REMARK 3 T33: 0.0928 T12: 0.0564 REMARK 3 T13: -0.0941 T23: -0.0325 REMARK 3 L TENSOR REMARK 3 L11: 0.1100 L22: 0.2390 REMARK 3 L33: 0.1417 L12: -0.1670 REMARK 3 L13: 0.0191 L23: -0.0236 REMARK 3 S TENSOR REMARK 3 S11: -0.0879 S12: -0.0716 S13: 0.0321 REMARK 3 S21: 0.0999 S22: 0.1737 S23: -0.1256 REMARK 3 S31: -0.0542 S32: 0.0653 S33: 0.1143 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 100 THROUGH 142 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.3184 -11.9478 -9.0327 REMARK 3 T TENSOR REMARK 3 T11: 0.1667 T22: 0.2119 REMARK 3 T33: 0.1307 T12: 0.0368 REMARK 3 T13: -0.1033 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.0957 L22: 0.5367 REMARK 3 L33: 0.3196 L12: -0.1980 REMARK 3 L13: -0.1000 L23: 0.1721 REMARK 3 S TENSOR REMARK 3 S11: -0.0359 S12: -0.1550 S13: 0.0623 REMARK 3 S21: 0.2047 S22: 0.2294 S23: -0.2289 REMARK 3 S31: -0.1438 S32: -0.0533 S33: 0.6616 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 143 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.5917 -25.7679 -10.7509 REMARK 3 T TENSOR REMARK 3 T11: 0.1432 T22: 0.2153 REMARK 3 T33: 0.0843 T12: 0.0841 REMARK 3 T13: 0.0090 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.5334 L22: 0.5926 REMARK 3 L33: 0.5290 L12: -0.3040 REMARK 3 L13: -0.1957 L23: -0.2403 REMARK 3 S TENSOR REMARK 3 S11: -0.2368 S12: -0.0078 S13: -0.0377 REMARK 3 S21: 0.2394 S22: 0.0294 S23: -0.0565 REMARK 3 S31: 0.0613 S32: -0.0051 S33: -0.5541 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Q70 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000085683. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 283 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 14187 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : FREE ELECTRON LASER REMARK 200 BEAMLINE : CXI REMARK 200 X-RAY GENERATOR MODEL : SLAC LCLS BEAMLINE CXI REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.34 REMARK 200 MONOCHROMATOR : NONE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : CORNELL-SLAC PIXEL ARRAY REMARK 200 DETECTOR (CSPAD) REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTFEL REMARK 200 DATA SCALING SOFTWARE : CRYSTFEL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37798 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 36.436 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.370 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10-18 % PEG 3350, 10-100 MM NACL, 0 REMARK 280 -100 MM MGCL2, PH 7.0, BATCH, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 96.40000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 55.65657 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 20.83333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 96.40000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 55.65657 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 20.83333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 96.40000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 55.65657 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 20.83333 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 96.40000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 55.65657 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 20.83333 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 96.40000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 55.65657 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 20.83333 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 96.40000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 55.65657 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 20.83333 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 111.31313 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 41.66667 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 111.31313 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 41.66667 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 111.31313 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 41.66667 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 111.31313 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 41.66667 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 111.31313 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 41.66667 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 111.31313 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 41.66667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 25050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -242.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -62.50000 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 -62.50000 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 -62.50000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 61460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 74080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -514.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -62.50000 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 -62.50000 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 -62.50000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 329 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 303 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS B 82 HAC1 CYC B 201 0.79 REMARK 500 SG CYS A 84 HAC1 CYC A 201 0.89 REMARK 500 SG CYS B 153 HAC2 CYC B 202 1.15 REMARK 500 HH12 ARG A 30 O HOH A 392 1.22 REMARK 500 HH11 ARG A 17 O HOH A 305 1.50 REMARK 500 HH11 ARG B 77 O HOH B 374 1.54 REMARK 500 O HOH A 343 O HOH A 347 1.98 REMARK 500 NH1 ARG A 30 O HOH A 392 2.02 REMARK 500 O HOH B 357 O HOH B 364 2.02 REMARK 500 OD2 ASP B 165 O HOH B 318 2.04 REMARK 500 O HOH A 322 O HOH A 324 2.08 REMARK 500 NH1 ARG A 17 O HOH A 305 2.11 REMARK 500 OD1 ASN B 54 O HOH B 379 2.13 REMARK 500 O HOH A 309 O HOH A 310 2.14 REMARK 500 NH1 ARG B 77 O HOH B 374 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HH11 ARG B 57 O1D CYC A 201 5554 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 75 43.94 -106.14 REMARK 500 LEU A 111 -45.47 -134.95 REMARK 500 GLN B 63 69.69 -118.68 REMARK 500 THR B 75 149.74 74.02 REMARK 500 CYS B 109 -62.51 -135.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CYC A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CYC B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CYC B 202 DBREF 4Q70 A 1 162 UNP P50032 PHCA_THEEB 1 162 DBREF 4Q70 B 1 172 UNP P50033 PHCB_THEEB 1 172 SEQRES 1 A 162 MET LYS THR PRO ILE THR GLU ALA ILE ALA ALA ALA ASP SEQRES 2 A 162 THR GLN GLY ARG PHE LEU SER ASN THR GLU LEU GLN ALA SEQRES 3 A 162 VAL ASP GLY ARG PHE LYS ARG ALA VAL ALA SER MET GLU SEQRES 4 A 162 ALA ALA ARG ALA LEU THR ASN ASN ALA GLN SER LEU ILE SEQRES 5 A 162 ASP GLY ALA ALA GLN ALA VAL TYR GLN LYS PHE PRO TYR SEQRES 6 A 162 THR THR THR MET GLN GLY SER GLN TYR ALA SER THR PRO SEQRES 7 A 162 GLU GLY LYS ALA LYS CYS ALA ARG ASP ILE GLY TYR TYR SEQRES 8 A 162 LEU ARG MET VAL THR TYR CYS LEU VAL ALA GLY GLY THR SEQRES 9 A 162 GLY PRO MET ASP GLU TYR LEU ILE ALA GLY LEU SER GLU SEQRES 10 A 162 ILE ASN SER THR PHE ASP LEU SER PRO SER TRP TYR ILE SEQRES 11 A 162 GLU ALA LEU LYS TYR ILE LYS ALA ASN HIS GLY LEU THR SEQRES 12 A 162 GLY GLN ALA ALA VAL GLU ALA ASN ALA TYR ILE ASP TYR SEQRES 13 A 162 ALA ILE ASN ALA LEU SER SEQRES 1 B 172 MET LEU ASP ALA PHE ALA LYS VAL VAL ALA GLN ALA ASP SEQRES 2 B 172 ALA ARG GLY GLU PHE LEU THR ASN ALA GLN PHE ASP ALA SEQRES 3 B 172 LEU SER ASN LEU VAL LYS GLU GLY ASN LYS ARG LEU ASP SEQRES 4 B 172 ALA VAL ASN ARG ILE THR SER ASN ALA SER THR ILE VAL SEQRES 5 B 172 ALA ASN ALA ALA ARG ALA LEU PHE ALA GLU GLN PRO GLN SEQRES 6 B 172 LEU ILE GLN PRO GLY GLY MEN ALA TYR THR ASN ARG ARG SEQRES 7 B 172 MET ALA ALA CYS LEU ARG ASP MET GLU ILE ILE LEU ARG SEQRES 8 B 172 TYR VAL THR TYR ALA ILE LEU ALA GLY ASP SER SER VAL SEQRES 9 B 172 LEU ASP ASP ARG CYS LEU ASN GLY LEU ARG GLU THR TYR SEQRES 10 B 172 GLN ALA LEU GLY THR PRO GLY SER SER VAL ALA VAL ALA SEQRES 11 B 172 ILE GLN LYS MET LYS ASP ALA ALA ILE ALA ILE ALA ASN SEQRES 12 B 172 ASP PRO ASN GLY ILE THR PRO GLY ASP CYS SER ALA LEU SEQRES 13 B 172 MET SER GLU ILE ALA GLY TYR PHE ASP ARG ALA ALA ALA SEQRES 14 B 172 ALA VAL ALA MODRES 4Q70 MEN B 72 ASN N-METHYL ASPARAGINE HET MEN B 72 16 HET CYC A 201 81 HET CYC B 201 81 HET CYC B 202 81 HETNAM MEN N-METHYL ASPARAGINE HETNAM CYC PHYCOCYANOBILIN FORMUL 2 MEN C5 H10 N2 O3 FORMUL 3 CYC 3(C33 H40 N4 O6) FORMUL 6 HOH *189(H2 O) HELIX 1 1 THR A 3 GLN A 15 1 13 HELIX 2 2 SER A 20 ASN A 47 1 28 HELIX 3 3 ASN A 47 PHE A 63 1 17 HELIX 4 4 PRO A 64 THR A 68 5 5 HELIX 5 5 THR A 77 GLY A 102 1 26 HELIX 6 6 THR A 104 LEU A 111 1 8 HELIX 7 7 GLY A 114 PHE A 122 1 9 HELIX 8 8 SER A 125 HIS A 140 1 16 HELIX 9 9 THR A 143 LEU A 161 1 19 HELIX 10 10 ASP B 3 ARG B 15 1 13 HELIX 11 11 THR B 20 GLU B 33 1 14 HELIX 12 12 GLU B 33 ASN B 47 1 15 HELIX 13 13 ASN B 47 GLN B 63 1 17 HELIX 14 14 PRO B 64 GLN B 68 5 5 HELIX 15 15 THR B 75 GLY B 100 1 26 HELIX 16 16 SER B 102 CYS B 109 1 8 HELIX 17 17 GLY B 112 GLY B 121 1 10 HELIX 18 18 PRO B 123 ASN B 143 1 21 HELIX 19 19 CYS B 153 ALA B 172 1 20 LINK C GLY B 71 N MEN B 72 1555 1555 1.37 LINK C MEN B 72 N ALA B 73 1555 1555 1.41 LINK SG CYS B 153 CAC CYC B 202 1555 1555 1.86 LINK SG CYS B 82 CAC CYC B 201 1555 1555 1.89 LINK SG CYS A 84 CAC CYC A 201 1555 1555 1.97 SITE 1 AC1 22 VAL A 59 THR A 66 SER A 72 GLN A 73 SITE 2 AC1 22 TYR A 74 ALA A 75 LYS A 83 CYS A 84 SITE 3 AC1 22 ARG A 86 ASP A 87 TYR A 90 TYR A 110 SITE 4 AC1 22 TRP A 128 TYR A 129 HOH A 313 HOH A 327 SITE 5 AC1 22 HOH A 340 HOH A 342 HOH A 393 ARG B 57 SITE 6 AC1 22 THR B 75 ASN B 76 SITE 1 AC2 12 LEU B 66 MEN B 72 ALA B 73 ARG B 78 SITE 2 AC2 12 ALA B 81 CYS B 82 ARG B 84 ASP B 85 SITE 3 AC2 12 LEU B 113 LEU B 120 SER B 126 HOH B 373 SITE 1 AC3 16 ASP A 28 ARG A 33 GLN A 145 ASN B 35 SITE 2 AC3 16 ASP B 39 ASN B 143 ASP B 144 ILE B 148 SITE 3 AC3 16 THR B 149 PRO B 150 GLY B 151 CYS B 153 SITE 4 AC3 16 HOH B 310 HOH B 322 HOH B 333 HOH B 381 CRYST1 192.800 192.800 62.500 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005187 0.002995 0.000000 0.00000 SCALE2 0.000000 0.005989 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016000 0.00000