HEADER TRANSFERASE/TRANSFERASE INHIBITOR 13-JUN-12 4FKJ TITLE CRYSTAL STRUCTURE OF THE CDK2 IN COMPLEX WITH AMINOPYRAZOLE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIN-DEPENDENT KINASE 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CELL DIVISION PROTEIN KINASE 2, P33 PROTEIN KINASE; COMPND 5 EC: 2.7.11.22; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CDK2, CDKN2; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HIGH-FIVE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFB1 KEYWDS ALPHA AND BETA PROTEIN (A+B), TRANSFERASE, TRANSFERASE-TRANSFERASE KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.N.KANG,J.A.STUCKEY REVDAT 4 13-SEP-23 4FKJ 1 REMARK SEQADV LINK REVDAT 3 29-MAY-13 4FKJ 1 SEQADV REVDAT 2 22-MAY-13 4FKJ 1 SOURCE REVDAT 1 08-MAY-13 4FKJ 0 JRNL AUTH Y.N.KANG,J.A.STUCKEY JRNL TITL CRYSTAL STRUCTURE OF THE CDK2 IN COMPLEX WITH AMINOPYRAZOLE JRNL TITL 2 INHIBITOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.1 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 34710 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1748 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 17 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.63 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.68 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.45 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2571 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2179 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2432 REMARK 3 BIN R VALUE (WORKING SET) : 0.2163 REMARK 3 BIN FREE R VALUE : 0.2458 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.41 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 139 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2227 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 172 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.59490 REMARK 3 B22 (A**2) : -2.93430 REMARK 3 B33 (A**2) : 3.52920 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.200 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.090 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2411 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3287 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 839 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 49 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 359 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2411 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 308 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2945 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.03 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.26 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.30 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|1 - 8} REMARK 3 ORIGIN FOR THE GROUP (A): -6.9745 -6.0910 -40.5193 REMARK 3 T TENSOR REMARK 3 T11: -0.1579 T22: 0.3040 REMARK 3 T33: -0.0621 T12: -0.0331 REMARK 3 T13: -0.0824 T23: -0.0541 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.1170 REMARK 3 L33: 1.3781 L12: -0.3998 REMARK 3 L13: 0.6782 L23: -0.3605 REMARK 3 S TENSOR REMARK 3 S11: -0.0462 S12: 0.1023 S13: -0.0682 REMARK 3 S21: -0.0609 S22: -0.0268 S23: 0.0380 REMARK 3 S31: 0.2064 S32: -0.1536 S33: 0.0730 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|9 - 32} REMARK 3 ORIGIN FOR THE GROUP (A): -4.0222 -6.2292 -34.6685 REMARK 3 T TENSOR REMARK 3 T11: -0.1347 T22: -0.0533 REMARK 3 T33: -0.0349 T12: -0.0110 REMARK 3 T13: -0.0306 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 8.3155 L22: 2.5465 REMARK 3 L33: 4.0078 L12: 0.7533 REMARK 3 L13: -2.9104 L23: 2.1000 REMARK 3 S TENSOR REMARK 3 S11: 0.0379 S12: 0.4783 S13: -0.3158 REMARK 3 S21: -0.0772 S22: -0.1603 S23: 0.3353 REMARK 3 S31: 0.0142 S32: -0.3579 S33: 0.1223 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {A|33 - 59} REMARK 3 ORIGIN FOR THE GROUP (A): -13.4983 1.4611 -22.8594 REMARK 3 T TENSOR REMARK 3 T11: -0.0905 T22: 0.0882 REMARK 3 T33: 0.0179 T12: 0.0184 REMARK 3 T13: 0.0335 T23: 0.0333 REMARK 3 L TENSOR REMARK 3 L11: 3.5508 L22: 0.0000 REMARK 3 L33: 1.0408 L12: 0.5354 REMARK 3 L13: -0.0264 L23: -2.3678 REMARK 3 S TENSOR REMARK 3 S11: -0.0215 S12: -0.2357 S13: 0.0789 REMARK 3 S21: 0.2059 S22: 0.1439 S23: 0.0769 REMARK 3 S31: -0.2161 S32: -0.5009 S33: -0.1224 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {A|60 - 121} REMARK 3 ORIGIN FOR THE GROUP (A): 3.7364 -1.5949 -22.1715 REMARK 3 T TENSOR REMARK 3 T11: -0.0511 T22: -0.0485 REMARK 3 T33: -0.0543 T12: 0.0109 REMARK 3 T13: 0.0045 T23: 0.0284 REMARK 3 L TENSOR REMARK 3 L11: 0.4812 L22: 0.8712 REMARK 3 L33: 2.2563 L12: 0.2417 REMARK 3 L13: 0.3829 L23: -0.1139 REMARK 3 S TENSOR REMARK 3 S11: -0.0382 S12: 0.1160 S13: 0.0268 REMARK 3 S21: -0.0343 S22: -0.0279 S23: 0.1402 REMARK 3 S31: 0.0769 S32: 0.0342 S33: 0.0662 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: {A|122 - 126} REMARK 3 ORIGIN FOR THE GROUP (A): -6.6138 1.2259 -11.8454 REMARK 3 T TENSOR REMARK 3 T11: -0.0320 T22: -0.0120 REMARK 3 T33: 0.0476 T12: 0.0358 REMARK 3 T13: 0.0168 T23: 0.0121 REMARK 3 L TENSOR REMARK 3 L11: 2.0583 L22: 0.1444 REMARK 3 L33: 0.2557 L12: -1.4312 REMARK 3 L13: 2.0764 L23: -0.7499 REMARK 3 S TENSOR REMARK 3 S11: 0.0533 S12: -0.0319 S13: 0.2605 REMARK 3 S21: 0.0365 S22: 0.0168 S23: 0.2138 REMARK 3 S31: 0.0915 S32: -0.0757 S33: -0.0701 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: {A|127 - 150} REMARK 3 ORIGIN FOR THE GROUP (A): 2.1809 -3.0855 -20.4418 REMARK 3 T TENSOR REMARK 3 T11: 0.0049 T22: -0.0077 REMARK 3 T33: -0.0385 T12: 0.0243 REMARK 3 T13: -0.0077 T23: 0.0424 REMARK 3 L TENSOR REMARK 3 L11: 2.1873 L22: 1.2671 REMARK 3 L33: 4.3116 L12: 1.0880 REMARK 3 L13: -0.6484 L23: -1.0320 REMARK 3 S TENSOR REMARK 3 S11: -0.0117 S12: 0.2673 S13: 0.1669 REMARK 3 S21: -0.1453 S22: 0.0824 S23: 0.0774 REMARK 3 S31: 0.0677 S32: -0.0374 S33: -0.0707 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: {A|151 - 243} REMARK 3 ORIGIN FOR THE GROUP (A): 1.0342 -12.5763 -1.9922 REMARK 3 T TENSOR REMARK 3 T11: 0.0089 T22: -0.0425 REMARK 3 T33: -0.0534 T12: -0.0169 REMARK 3 T13: 0.0003 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 1.5261 L22: 0.6376 REMARK 3 L33: 1.0804 L12: 0.3780 REMARK 3 L13: -0.3878 L23: -0.6893 REMARK 3 S TENSOR REMARK 3 S11: 0.0692 S12: -0.0616 S13: -0.0845 REMARK 3 S21: -0.0273 S22: -0.0519 S23: 0.0303 REMARK 3 S31: 0.1308 S32: -0.0105 S33: -0.0173 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: {A|244 - 250} REMARK 3 ORIGIN FOR THE GROUP (A): 14.7809 -11.6157 3.2031 REMARK 3 T TENSOR REMARK 3 T11: 0.0707 T22: 0.0555 REMARK 3 T33: 0.0417 T12: -0.0035 REMARK 3 T13: -0.0717 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 1.4688 L22: 0.0000 REMARK 3 L33: 0.8120 L12: -0.2893 REMARK 3 L13: -0.6663 L23: -1.9028 REMARK 3 S TENSOR REMARK 3 S11: 0.0500 S12: -0.1081 S13: -0.1082 REMARK 3 S21: -0.0382 S22: -0.0043 S23: -0.0253 REMARK 3 S31: 0.0528 S32: -0.0310 S33: -0.0457 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: {A|251 - 298} REMARK 3 ORIGIN FOR THE GROUP (A): 12.7075 -0.1334 -7.4654 REMARK 3 T TENSOR REMARK 3 T11: -0.0153 T22: -0.0209 REMARK 3 T33: -0.0712 T12: -0.0036 REMARK 3 T13: 0.0051 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 1.3518 L22: 1.1702 REMARK 3 L33: 0.8577 L12: 0.5523 REMARK 3 L13: 0.2340 L23: -0.0986 REMARK 3 S TENSOR REMARK 3 S11: 0.0439 S12: 0.0209 S13: 0.0451 REMARK 3 S21: 0.0606 S22: -0.0215 S23: -0.0061 REMARK 3 S31: -0.0172 S32: 0.2028 S33: -0.0224 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4FKJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000073013. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34775 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.630 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.41400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2R3I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15-20% PEG3350, 0.2M AMMONIUM ACETATE, REMARK 280 0.1M HEPES, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K, REMARK 280 VAPOR DIFFUSION, SITTING DROP, PH 7.8 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.65050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.12800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.85650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 36.12800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.65050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.85650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 36 REMARK 465 LEU A 37 REMARK 465 ASP A 38 REMARK 465 THR A 39 REMARK 465 GLU A 40 REMARK 465 THR A 41 REMARK 465 GLU A 42 REMARK 465 GLY A 43 REMARK 465 VAL A 44 REMARK 465 PHE A 152 REMARK 465 GLY A 153 REMARK 465 VAL A 154 REMARK 465 PRO A 155 REMARK 465 VAL A 156 REMARK 465 ARG A 157 REMARK 465 THR A 158 REMARK 465 TYR A 159 REMARK 465 THR A 160 REMARK 465 HIS A 161 REMARK 465 GLU A 162 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 73 CG CD OE1 OE2 REMARK 470 ASN A 74 CG OD1 ND2 REMARK 470 LYS A 178 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 126 -18.87 81.47 REMARK 500 TYR A 179 61.65 -116.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 11K A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4EK3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF APO CDK2 REMARK 900 RELATED ID: 4EK4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CDK2 IN COMPLEX WITH AMINOPYRAZOLE REMARK 900 INHIBITOR REMARK 900 RELATED ID: 4EK5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CDK2 IN COMPLEX WITH AMINOPYRAZOLE REMARK 900 INHIBITOR REMARK 900 RELATED ID: 4EK6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CDK2 IN COMPLEX WITH AMINOPYRAZOLE REMARK 900 INHIBITOR REMARK 900 RELATED ID: 4EK8 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CDK2 IN COMPLEX WITH THIAZOLYLPYRIMIDINE REMARK 900 INHIBITOR REMARK 900 RELATED ID: 4FKG RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CDK2 IN COMPLEX WITH AMINOPYRAZOLE REMARK 900 INHIBITOR REMARK 900 RELATED ID: 4FKI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CDK2 IN COMPLEX WITH AMINOPYRAZOLE REMARK 900 INHIBITOR DBREF 4FKJ A 1 298 UNP P24941 CDK2_HUMAN 1 298 SEQADV 4FKJ ACE A 0 UNP P24941 ACETYLATION SEQRES 1 A 299 ACE MET GLU ASN PHE GLN LYS VAL GLU LYS ILE GLY GLU SEQRES 2 A 299 GLY THR TYR GLY VAL VAL TYR LYS ALA ARG ASN LYS LEU SEQRES 3 A 299 THR GLY GLU VAL VAL ALA LEU LYS LYS ILE ARG LEU ASP SEQRES 4 A 299 THR GLU THR GLU GLY VAL PRO SER THR ALA ILE ARG GLU SEQRES 5 A 299 ILE SER LEU LEU LYS GLU LEU ASN HIS PRO ASN ILE VAL SEQRES 6 A 299 LYS LEU LEU ASP VAL ILE HIS THR GLU ASN LYS LEU TYR SEQRES 7 A 299 LEU VAL PHE GLU PHE LEU HIS GLN ASP LEU LYS LYS PHE SEQRES 8 A 299 MET ASP ALA SER ALA LEU THR GLY ILE PRO LEU PRO LEU SEQRES 9 A 299 ILE LYS SER TYR LEU PHE GLN LEU LEU GLN GLY LEU ALA SEQRES 10 A 299 PHE CYS HIS SER HIS ARG VAL LEU HIS ARG ASP LEU LYS SEQRES 11 A 299 PRO GLN ASN LEU LEU ILE ASN THR GLU GLY ALA ILE LYS SEQRES 12 A 299 LEU ALA ASP PHE GLY LEU ALA ARG ALA PHE GLY VAL PRO SEQRES 13 A 299 VAL ARG THR TYR THR HIS GLU VAL VAL THR LEU TRP TYR SEQRES 14 A 299 ARG ALA PRO GLU ILE LEU LEU GLY CYS LYS TYR TYR SER SEQRES 15 A 299 THR ALA VAL ASP ILE TRP SER LEU GLY CYS ILE PHE ALA SEQRES 16 A 299 GLU MET VAL THR ARG ARG ALA LEU PHE PRO GLY ASP SER SEQRES 17 A 299 GLU ILE ASP GLN LEU PHE ARG ILE PHE ARG THR LEU GLY SEQRES 18 A 299 THR PRO ASP GLU VAL VAL TRP PRO GLY VAL THR SER MET SEQRES 19 A 299 PRO ASP TYR LYS PRO SER PHE PRO LYS TRP ALA ARG GLN SEQRES 20 A 299 ASP PHE SER LYS VAL VAL PRO PRO LEU ASP GLU ASP GLY SEQRES 21 A 299 ARG SER LEU LEU SER GLN MET LEU HIS TYR ASP PRO ASN SEQRES 22 A 299 LYS ARG ILE SER ALA LYS ALA ALA LEU ALA HIS PRO PHE SEQRES 23 A 299 PHE GLN ASP VAL THR LYS PRO VAL PRO HIS LEU ARG LEU HET ACE A 0 2 HET 11K A 301 26 HET ACT A 302 4 HETNAM ACE ACETYL GROUP HETNAM 11K N-(3-CYCLOPROPYL-1H-PYRAZOL-5-YL)-2-[4-(2-PYRROLIDIN-1- HETNAM 2 11K YLETHOXY)PHENYL]ACETAMIDE HETNAM ACT ACETATE ION FORMUL 1 ACE C2 H4 O FORMUL 2 11K C20 H26 N4 O2 FORMUL 3 ACT C2 H3 O2 1- FORMUL 4 HOH *172(H2 O) HELIX 1 1 SER A 46 LYS A 56 1 11 HELIX 2 2 LEU A 87 SER A 94 1 8 HELIX 3 3 PRO A 100 HIS A 121 1 22 HELIX 4 4 LYS A 129 GLN A 131 5 3 HELIX 5 5 ALA A 170 LEU A 175 1 6 HELIX 6 6 THR A 182 ARG A 199 1 18 HELIX 7 7 SER A 207 GLY A 220 1 14 HELIX 8 8 GLY A 229 MET A 233 5 5 HELIX 9 9 ASP A 247 VAL A 252 1 6 HELIX 10 10 ASP A 256 LEU A 267 1 12 HELIX 11 11 SER A 276 ALA A 282 1 7 HELIX 12 12 HIS A 283 GLN A 287 5 5 SHEET 1 A 5 PHE A 4 GLU A 12 0 SHEET 2 A 5 VAL A 17 ASN A 23 -1 O LYS A 20 N GLU A 8 SHEET 3 A 5 VAL A 29 ILE A 35 -1 O LEU A 32 N TYR A 19 SHEET 4 A 5 LYS A 75 GLU A 81 -1 O LEU A 76 N ILE A 35 SHEET 5 A 5 LEU A 66 THR A 72 -1 N ILE A 70 O TYR A 77 SHEET 1 B 3 GLN A 85 ASP A 86 0 SHEET 2 B 3 LEU A 133 ILE A 135 -1 O ILE A 135 N GLN A 85 SHEET 3 B 3 ILE A 141 LEU A 143 -1 O LYS A 142 N LEU A 134 LINK C ACE A 0 N MET A 1 1555 1555 1.34 CISPEP 1 PRO A 253 PRO A 254 0 7.70 SITE 1 AC1 10 GLU A 8 LYS A 9 ILE A 10 ALA A 31 SITE 2 AC1 10 GLU A 81 PHE A 82 LEU A 83 HIS A 84 SITE 3 AC1 10 LEU A 134 HOH A 488 SITE 1 AC2 5 THR A 137 GLU A 138 GLU A 257 SER A 261 SITE 2 AC2 5 HOH A 485 CRYST1 53.301 71.713 72.256 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018761 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013944 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013840 0.00000