HEADER TRANSCRIPTION 09-APR-14 4CY1 TITLE CRYSTAL STRUCTURE OF THE KANSL1-WDR5 COMPLEX. COMPND MOL_ID: 1; COMPND 2 MOLECULE: WD REPEAT-CONTAINING PROTEIN 5; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 23-334; COMPND 5 SYNONYM: BMP2-INDUCED 3-KB GENE PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: KAT8 REGULATORY NSL COMPLEX SUBUNIT 1; COMPND 9 CHAIN: C, D; COMPND 10 FRAGMENT: RESIDUES 585-598; COMPND 11 SYNONYM: KANSL1, MLL1/MLL COMPLEX SUBUNIT KANSL1, MSL1 HOMOLOG 1, COMPND 12 HMSL1V1, NSL COMPLEX PROTEIN NSL1, NON-SPECIFIC LETHAL 1 HOMOLOG; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: STAR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPROEXHTB; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS TRANSCRIPTION, EPIGENETIC REGULATOR, HISTONE ACETYLATION, CHROMATIN EXPDTA X-RAY DIFFRACTION AUTHOR J.DIAS,J.BRETTSCHNEIDER,S.CUSACK,J.KADLEC REVDAT 2 20-DEC-23 4CY1 1 REMARK REVDAT 1 14-MAY-14 4CY1 0 JRNL AUTH J.DIAS,N.VAN NGUYEN,P.GEORGIEV,A.GAUB,J.BRETTSCHNEIDER, JRNL AUTH 2 S.CUSACK,J.KADLEC,A.AKHTAR JRNL TITL STRUCTURAL ANALYSIS OF THE KANSL1/WDR5/KANSL2 COMPLEX JRNL TITL 2 REVEALS THAT WDR5 IS REQUIRED FOR EFFICIENT ASSEMBLY AND JRNL TITL 3 CHROMATIN TARGETING OF THE NSL COMPLEX. JRNL REF GENES DEV. V. 28 929 2014 JRNL REFN ISSN 0890-9369 JRNL PMID 24788516 JRNL DOI 10.1101/GAD.240200.114 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 86154 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4494 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5563 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.34 REMARK 3 BIN R VALUE (WORKING SET) : 0.2460 REMARK 3 BIN FREE R VALUE SET COUNT : 306 REMARK 3 BIN FREE R VALUE : 0.2800 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4891 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 321 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.17000 REMARK 3 B22 (A**2) : 4.49000 REMARK 3 B33 (A**2) : -3.32000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.74000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.020 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.015 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.035 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.820 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5022 ; 0.004 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4762 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6807 ; 1.007 ; 1.945 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11021 ; 0.665 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 628 ; 6.815 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 189 ;29.663 ;24.815 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 863 ;11.560 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;10.987 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 775 ; 0.060 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5577 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1109 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2524 ; 0.443 ; 7.196 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2523 ; 0.443 ;60.393 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2498 ; 0.540 ; 1.198 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5001 ; 2.550 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4890 ; 2.657 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.793 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : -H,-K,L REMARK 3 TWIN FRACTION : 0.207 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 4CY1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-APR-14. REMARK 100 THE DEPOSITION ID IS D_1290060281. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.939 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 90649 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.380 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.64000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2G99 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 26% (W/V) PEG 3350, 0.2 M AMMONIUM REMARK 280 SULPHATE, 0.1 M BIS-TRIS, PH 6.5. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 46.22500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1850 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 21 REMARK 465 GLY A 22 REMARK 465 ALA A 23 REMARK 465 THR A 24 REMARK 465 GLN A 25 REMARK 465 SER A 26 REMARK 465 LYS A 27 REMARK 465 PRO A 28 REMARK 465 THR A 29 REMARK 465 PRO A 30 REMARK 465 ASP A 213 REMARK 465 GLY A 335 REMARK 465 ALA A 336 REMARK 465 MET B 21 REMARK 465 GLY B 22 REMARK 465 ALA B 23 REMARK 465 THR B 24 REMARK 465 GLN B 25 REMARK 465 SER B 26 REMARK 465 LYS B 27 REMARK 465 PRO B 28 REMARK 465 THR B 29 REMARK 465 PRO B 30 REMARK 465 VAL B 31 REMARK 465 ASP B 212 REMARK 465 ASP B 213 REMARK 465 GLY B 335 REMARK 465 ALA B 336 REMARK 465 ASP C 585 REMARK 465 ASP D 585 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 151 7.28 81.41 REMARK 500 LEU A 234 36.44 -79.79 REMARK 500 ASN A 257 89.91 -157.80 REMARK 500 ASP A 324 -67.39 -121.93 REMARK 500 LEU B 234 37.69 -81.30 REMARK 500 ASP B 324 -66.21 -122.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1335 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1335 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 1000 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4CY2 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE KANSL1-WDR5-KNSL2 COMPLEX. REMARK 900 RELATED ID: 4CY3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE NSL1-WDS COMPLEX. REMARK 900 RELATED ID: 4CY5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE NSL1-WDS-NSL2 COMPLEX. DBREF 4CY1 A 23 334 UNP P61964 WDR5_HUMAN 23 334 DBREF 4CY1 B 23 334 UNP P61964 WDR5_HUMAN 23 334 DBREF 4CY1 C 585 598 UNP Q7Z3B3 KANL1_HUMAN 585 598 DBREF 4CY1 D 585 598 UNP Q7Z3B3 KANL1_HUMAN 585 598 SEQADV 4CY1 MET A 21 UNP P61964 EXPRESSION TAG SEQADV 4CY1 GLY A 22 UNP P61964 EXPRESSION TAG SEQADV 4CY1 GLY A 335 UNP P61964 EXPRESSION TAG SEQADV 4CY1 ALA A 336 UNP P61964 EXPRESSION TAG SEQADV 4CY1 MET B 21 UNP P61964 EXPRESSION TAG SEQADV 4CY1 GLY B 22 UNP P61964 EXPRESSION TAG SEQADV 4CY1 GLY B 335 UNP P61964 EXPRESSION TAG SEQADV 4CY1 ALA B 336 UNP P61964 EXPRESSION TAG SEQADV 4CY1 TYR C 599 UNP Q7Z3B3 EXPRESSION TAG SEQADV 4CY1 TYR D 599 UNP Q7Z3B3 EXPRESSION TAG SEQRES 1 A 316 MET GLY ALA THR GLN SER LYS PRO THR PRO VAL LYS PRO SEQRES 2 A 316 ASN TYR ALA LEU LYS PHE THR LEU ALA GLY HIS THR LYS SEQRES 3 A 316 ALA VAL SER SER VAL LYS PHE SER PRO ASN GLY GLU TRP SEQRES 4 A 316 LEU ALA SER SER SER ALA ASP LYS LEU ILE LYS ILE TRP SEQRES 5 A 316 GLY ALA TYR ASP GLY LYS PHE GLU LYS THR ILE SER GLY SEQRES 6 A 316 HIS LYS LEU GLY ILE SER ASP VAL ALA TRP SER SER ASP SEQRES 7 A 316 SER ASN LEU LEU VAL SER ALA SER ASP ASP LYS THR LEU SEQRES 8 A 316 LYS ILE TRP ASP VAL SER SER GLY LYS CYS LEU LYS THR SEQRES 9 A 316 LEU LYS GLY HIS SER ASN TYR VAL PHE CYS CYS ASN PHE SEQRES 10 A 316 ASN PRO GLN SER ASN LEU ILE VAL SER GLY SER PHE ASP SEQRES 11 A 316 GLU SER VAL ARG ILE TRP ASP VAL LYS THR GLY LYS CYS SEQRES 12 A 316 LEU LYS THR LEU PRO ALA HIS SER ASP PRO VAL SER ALA SEQRES 13 A 316 VAL HIS PHE ASN ARG ASP GLY SER LEU ILE VAL SER SER SEQRES 14 A 316 SER TYR ASP GLY LEU CYS ARG ILE TRP ASP THR ALA SER SEQRES 15 A 316 GLY GLN CYS LEU LYS THR LEU ILE ASP ASP ASP ASN PRO SEQRES 16 A 316 PRO VAL SER PHE VAL LYS PHE SER PRO ASN GLY LYS TYR SEQRES 17 A 316 ILE LEU ALA ALA THR LEU ASP ASN THR LEU LYS LEU TRP SEQRES 18 A 316 ASP TYR SER LYS GLY LYS CYS LEU LYS THR TYR THR GLY SEQRES 19 A 316 HIS LYS ASN GLU LYS TYR CYS ILE PHE ALA ASN PHE SER SEQRES 20 A 316 VAL THR GLY GLY LYS TRP ILE VAL SER GLY SER GLU ASP SEQRES 21 A 316 ASN LEU VAL TYR ILE TRP ASN LEU GLN THR LYS GLU ILE SEQRES 22 A 316 VAL GLN LYS LEU GLN GLY HIS THR ASP VAL VAL ILE SER SEQRES 23 A 316 THR ALA CYS HIS PRO THR GLU ASN ILE ILE ALA SER ALA SEQRES 24 A 316 ALA LEU GLU ASN ASP LYS THR ILE LYS LEU TRP LYS SER SEQRES 25 A 316 ASP CYS GLY ALA SEQRES 1 B 316 MET GLY ALA THR GLN SER LYS PRO THR PRO VAL LYS PRO SEQRES 2 B 316 ASN TYR ALA LEU LYS PHE THR LEU ALA GLY HIS THR LYS SEQRES 3 B 316 ALA VAL SER SER VAL LYS PHE SER PRO ASN GLY GLU TRP SEQRES 4 B 316 LEU ALA SER SER SER ALA ASP LYS LEU ILE LYS ILE TRP SEQRES 5 B 316 GLY ALA TYR ASP GLY LYS PHE GLU LYS THR ILE SER GLY SEQRES 6 B 316 HIS LYS LEU GLY ILE SER ASP VAL ALA TRP SER SER ASP SEQRES 7 B 316 SER ASN LEU LEU VAL SER ALA SER ASP ASP LYS THR LEU SEQRES 8 B 316 LYS ILE TRP ASP VAL SER SER GLY LYS CYS LEU LYS THR SEQRES 9 B 316 LEU LYS GLY HIS SER ASN TYR VAL PHE CYS CYS ASN PHE SEQRES 10 B 316 ASN PRO GLN SER ASN LEU ILE VAL SER GLY SER PHE ASP SEQRES 11 B 316 GLU SER VAL ARG ILE TRP ASP VAL LYS THR GLY LYS CYS SEQRES 12 B 316 LEU LYS THR LEU PRO ALA HIS SER ASP PRO VAL SER ALA SEQRES 13 B 316 VAL HIS PHE ASN ARG ASP GLY SER LEU ILE VAL SER SER SEQRES 14 B 316 SER TYR ASP GLY LEU CYS ARG ILE TRP ASP THR ALA SER SEQRES 15 B 316 GLY GLN CYS LEU LYS THR LEU ILE ASP ASP ASP ASN PRO SEQRES 16 B 316 PRO VAL SER PHE VAL LYS PHE SER PRO ASN GLY LYS TYR SEQRES 17 B 316 ILE LEU ALA ALA THR LEU ASP ASN THR LEU LYS LEU TRP SEQRES 18 B 316 ASP TYR SER LYS GLY LYS CYS LEU LYS THR TYR THR GLY SEQRES 19 B 316 HIS LYS ASN GLU LYS TYR CYS ILE PHE ALA ASN PHE SER SEQRES 20 B 316 VAL THR GLY GLY LYS TRP ILE VAL SER GLY SER GLU ASP SEQRES 21 B 316 ASN LEU VAL TYR ILE TRP ASN LEU GLN THR LYS GLU ILE SEQRES 22 B 316 VAL GLN LYS LEU GLN GLY HIS THR ASP VAL VAL ILE SER SEQRES 23 B 316 THR ALA CYS HIS PRO THR GLU ASN ILE ILE ALA SER ALA SEQRES 24 B 316 ALA LEU GLU ASN ASP LYS THR ILE LYS LEU TRP LYS SER SEQRES 25 B 316 ASP CYS GLY ALA SEQRES 1 C 15 ASP GLY THR CYS VAL ALA ALA ARG THR ARG PRO VAL LEU SEQRES 2 C 15 SER TYR SEQRES 1 D 15 ASP GLY THR CYS VAL ALA ALA ARG THR ARG PRO VAL LEU SEQRES 2 D 15 SER TYR HET GOL A1335 6 HET GOL B1335 6 HET GOL D1000 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 GOL 3(C3 H8 O3) FORMUL 8 HOH *321(H2 O) HELIX 1 1 ALA C 590 ARG C 594 5 5 HELIX 2 2 ALA D 590 ARG D 594 5 5 SHEET 1 AA 4 ALA A 36 LEU A 41 0 SHEET 2 AA 4 ILE A 327 LYS A 331 -1 O ILE A 327 N LEU A 41 SHEET 3 AA 4 ILE A 315 ALA A 320 -1 O ILE A 316 N TRP A 330 SHEET 4 AA 4 VAL A 304 CYS A 309 -1 O SER A 306 N ALA A 319 SHEET 1 AB 4 VAL A 48 PHE A 53 0 SHEET 2 AB 4 TRP A 59 SER A 64 -1 O ALA A 61 N LYS A 52 SHEET 3 AB 4 LEU A 68 GLY A 73 -1 O LEU A 68 N SER A 64 SHEET 4 AB 4 PHE A 79 SER A 84 -1 N GLU A 80 O ILE A 71 SHEET 1 AC 4 ILE A 90 TRP A 95 0 SHEET 2 AC 4 LEU A 101 SER A 106 -1 O VAL A 103 N ALA A 94 SHEET 3 AC 4 LEU A 111 ASP A 115 -1 O LYS A 112 N SER A 104 SHEET 4 AC 4 LYS A 120 LEU A 125 -1 O LYS A 120 N ASP A 115 SHEET 1 AD 4 VAL A 132 PHE A 137 0 SHEET 2 AD 4 LEU A 143 SER A 148 -1 O VAL A 145 N ASN A 136 SHEET 3 AD 4 VAL A 153 ASP A 157 -1 O ARG A 154 N SER A 146 SHEET 4 AD 4 CYS A 163 LEU A 167 -1 N LEU A 164 O ILE A 155 SHEET 1 AE 4 VAL A 174 PHE A 179 0 SHEET 2 AE 4 LEU A 185 SER A 190 -1 O VAL A 187 N HIS A 178 SHEET 3 AE 4 CYS A 195 ASP A 199 -1 O ARG A 196 N SER A 188 SHEET 4 AE 4 CYS A 205 LEU A 209 -1 N LEU A 206 O ILE A 197 SHEET 1 AF 4 VAL A 217 PHE A 222 0 SHEET 2 AF 4 ILE A 229 THR A 233 -1 O LEU A 230 N LYS A 221 SHEET 3 AF 4 THR A 237 ASP A 242 -1 O THR A 237 N THR A 233 SHEET 4 AF 4 LYS A 247 TYR A 252 -1 O LYS A 247 N ASP A 242 SHEET 1 AG 4 ALA A 264 SER A 267 0 SHEET 2 AG 4 TRP A 273 SER A 276 -1 O TRP A 273 N SER A 267 SHEET 3 AG 4 VAL A 283 ASN A 287 -1 O TYR A 284 N SER A 276 SHEET 4 AG 4 ILE A 293 LEU A 297 -1 N VAL A 294 O ILE A 285 SHEET 1 BA 4 ALA B 36 LEU B 41 0 SHEET 2 BA 4 ILE B 327 LYS B 331 -1 O ILE B 327 N LEU B 41 SHEET 3 BA 4 ILE B 315 ALA B 320 -1 O ILE B 316 N TRP B 330 SHEET 4 BA 4 VAL B 304 CYS B 309 -1 O SER B 306 N ALA B 319 SHEET 1 BB 4 VAL B 48 PHE B 53 0 SHEET 2 BB 4 TRP B 59 SER B 64 -1 O ALA B 61 N LYS B 52 SHEET 3 BB 4 LEU B 68 GLY B 73 -1 O LEU B 68 N SER B 64 SHEET 4 BB 4 PHE B 79 SER B 84 -1 N GLU B 80 O ILE B 71 SHEET 1 BC 4 ILE B 90 TRP B 95 0 SHEET 2 BC 4 LEU B 101 SER B 106 -1 O VAL B 103 N ALA B 94 SHEET 3 BC 4 LEU B 111 ASP B 115 -1 O LYS B 112 N SER B 104 SHEET 4 BC 4 CYS B 121 LEU B 125 -1 N LEU B 122 O ILE B 113 SHEET 1 BD 4 VAL B 132 PHE B 137 0 SHEET 2 BD 4 LEU B 143 SER B 148 -1 O VAL B 145 N ASN B 136 SHEET 3 BD 4 VAL B 153 ASP B 157 -1 O ARG B 154 N SER B 146 SHEET 4 BD 4 CYS B 163 LEU B 167 -1 N LEU B 164 O ILE B 155 SHEET 1 BE 4 VAL B 174 PHE B 179 0 SHEET 2 BE 4 LEU B 185 SER B 190 -1 O VAL B 187 N HIS B 178 SHEET 3 BE 4 CYS B 195 ASP B 199 -1 O ARG B 196 N SER B 188 SHEET 4 BE 4 CYS B 205 LEU B 209 -1 N LEU B 206 O ILE B 197 SHEET 1 BF 4 VAL B 217 PHE B 222 0 SHEET 2 BF 4 TYR B 228 THR B 233 -1 O LEU B 230 N LYS B 221 SHEET 3 BF 4 THR B 237 ASP B 242 -1 O THR B 237 N THR B 233 SHEET 4 BF 4 LYS B 247 TYR B 252 -1 O LYS B 247 N ASP B 242 SHEET 1 BG 4 ALA B 264 SER B 267 0 SHEET 2 BG 4 TRP B 273 SER B 276 -1 O TRP B 273 N SER B 267 SHEET 3 BG 4 VAL B 283 ASN B 287 -1 O TYR B 284 N SER B 276 SHEET 4 BG 4 ILE B 293 LEU B 297 -1 N VAL B 294 O ILE B 285 SITE 1 AC1 5 ASN B 138 GLN B 140 GLY B 183 THR B 200 SITE 2 AC1 5 HOH B2068 SITE 1 AC2 5 ASN A 138 GLN A 140 ASN A 142 GLY A 183 SITE 2 AC2 5 HOH A2073 SITE 1 AC3 2 ASN A 56 TRP A 59 CRYST1 39.760 92.450 81.170 90.00 90.18 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025151 0.000000 0.000079 0.00000 SCALE2 0.000000 0.010817 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012320 0.00000 MTRIX1 1 -0.999940 0.007600 -0.007800 11.55323 1 MTRIX2 1 -0.007600 -0.999970 -0.000910 -22.66982 1 MTRIX3 1 -0.007810 -0.000850 0.999970 -40.55124 1 MTRIX1 2 -0.999890 -0.009110 0.011850 12.44732 1 MTRIX2 2 0.009120 -0.999960 0.001020 -22.64658 1 MTRIX3 2 0.011840 0.001130 0.999930 40.65837 1