HEADER MOTOR PROTEIN 20-SEP-11 4A1Z TITLE EG5-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: KINESIN-LIKE PROTEIN KIF11; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: KINESIN-LIKE PROTEIN 1, KINESIN-LIKE SPINDLE PROTEIN HKSP, COMPND 5 KINESIN-RELATED MOTOR PROTEIN EG5, THYROID RECEPTOR-INTERACTING COMPND 6 PROTEIN 5, TR-INTERACTING PROTEIN 5, TRIP-5; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PLYSS KEYWDS MOTOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.K.TALAPATRA,F.KOZIELSKI REVDAT 4 20-DEC-23 4A1Z 1 REMARK LINK REVDAT 3 04-SEP-13 4A1Z 1 JRNL REVDAT 2 31-JUL-13 4A1Z 1 JRNL REVDAT 1 31-OCT-12 4A1Z 0 JRNL AUTH S.K.TALAPATRA,N.G.ANTHONY,S.P.MACKAY,F.KOZIELSKI JRNL TITL THE MITOTIC KINESIN EG5 OVERCOMES INHIBITION TO THE PHASE JRNL TITL 2 I/II CLINICAL CANDIDATE SB743921 BY AN ALLOSTERIC RESISTANCE JRNL TITL 3 MECHANISM. JRNL REF J.MED.CHEM. V. 56 6317 2013 JRNL REFN ISSN 0022-2623 JRNL PMID 23875972 JRNL DOI 10.1021/JM4006274 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 17640 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 902 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.2335 - 5.0807 0.99 2947 160 0.1640 0.2222 REMARK 3 2 5.0807 - 4.0361 0.99 2866 154 0.1337 0.2036 REMARK 3 3 4.0361 - 3.5269 0.98 2852 159 0.1648 0.2574 REMARK 3 4 3.5269 - 3.2049 0.96 2760 156 0.1806 0.2610 REMARK 3 5 3.2049 - 2.9754 0.93 2709 145 0.2033 0.3352 REMARK 3 6 2.9754 - 2.8001 0.90 2604 128 0.2586 0.3800 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 27.48 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.37 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 11.30280 REMARK 3 B22 (A**2) : -6.68340 REMARK 3 B33 (A**2) : -4.24540 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.20980 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 5156 REMARK 3 ANGLE : 1.535 6984 REMARK 3 CHIRALITY : 0.096 834 REMARK 3 PLANARITY : 0.007 881 REMARK 3 DIHEDRAL : 18.183 1921 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4A1Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1290049698. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97630 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18414 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.50000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1II6 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG 3350 0.2 M NA NO3 0.1 M MES REMARK 280 (PH 5.6)., PH 6.8 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.19500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ASP 130 TO VAL REMARK 400 ENGINEERED RESIDUE IN CHAIN B, ASP 130 TO VAL REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 GLN A 4 REMARK 465 PRO A 5 REMARK 465 ASN A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 ALA A 9 REMARK 465 LYS A 10 REMARK 465 LYS A 11 REMARK 465 LYS A 12 REMARK 465 GLU A 13 REMARK 465 GLU A 14 REMARK 465 LYS A 15 REMARK 465 GLY A 16 REMARK 465 SER A 120 REMARK 465 PRO A 121 REMARK 465 ASN A 122 REMARK 465 GLU A 123 REMARK 465 GLU A 124 REMARK 465 ARG A 189 REMARK 465 ASN A 190 REMARK 465 LYS A 191 REMARK 465 ASN A 271 REMARK 465 ILE A 272 REMARK 465 GLY A 273 REMARK 465 ARG A 274 REMARK 465 SER A 275 REMARK 465 GLY A 276 REMARK 465 ALA A 277 REMARK 465 VAL A 278 REMARK 465 ASP A 279 REMARK 465 LYS A 280 REMARK 465 ARG A 281 REMARK 465 ALA A 282 REMARK 465 ARG A 283 REMARK 465 VAL A 365 REMARK 465 ASN A 366 REMARK 465 GLN A 367 REMARK 465 LYS A 368 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 SER B 3 REMARK 465 GLN B 4 REMARK 465 PRO B 5 REMARK 465 ASN B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 ALA B 9 REMARK 465 LYS B 10 REMARK 465 LYS B 11 REMARK 465 LYS B 12 REMARK 465 GLU B 13 REMARK 465 GLU B 14 REMARK 465 LYS B 15 REMARK 465 GLY B 56 REMARK 465 LEU B 57 REMARK 465 ALA B 58 REMARK 465 ASP B 59 REMARK 465 LYS B 60 REMARK 465 SER B 61 REMARK 465 SER B 120 REMARK 465 PRO B 121 REMARK 465 ASN B 122 REMARK 465 GLU B 123 REMARK 465 GLU B 124 REMARK 465 TYR B 125 REMARK 465 THR B 126 REMARK 465 ARG B 274 REMARK 465 SER B 275 REMARK 465 GLY B 276 REMARK 465 ALA B 277 REMARK 465 VAL B 278 REMARK 465 ASP B 279 REMARK 465 LYS B 280 REMARK 465 ARG B 281 REMARK 465 ALA B 282 REMARK 465 ARG B 283 REMARK 465 GLU B 284 REMARK 465 ALA B 285 REMARK 465 GLY B 286 REMARK 465 ASN B 287 REMARK 465 ILE B 288 REMARK 465 VAL B 365 REMARK 465 ASN B 366 REMARK 465 GLN B 367 REMARK 465 LYS B 368 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 119 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 125 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 128 CG CD OE1 OE2 REMARK 470 ASP A 177 CG OD1 OD2 REMARK 470 VAL A 178 CG1 CG2 REMARK 470 PRO A 188 O REMARK 470 ARG A 192 NE CZ NH1 NH2 REMARK 470 LYS A 197 CG CD CE NZ REMARK 470 GLU A 284 CG CD OE1 OE2 REMARK 470 ARG A 327 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 364 CG CD OE1 OE2 REMARK 470 GLU B 128 CD OE1 OE2 REMARK 470 LYS B 191 CG CD CE NZ REMARK 470 ASN B 289 CG OD1 ND2 REMARK 470 ARG B 327 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 364 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2047 O HOH A 2071 2.15 REMARK 500 OG SER A 340 O1 NO3 A 2000 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 363 C - N - CA ANGL. DEV. = 9.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 116 -60.84 -104.69 REMARK 500 VAL A 178 173.44 171.77 REMARK 500 SER A 179 -74.61 -56.64 REMARK 500 GLU A 180 73.80 49.68 REMARK 500 GLU A 253 76.01 63.25 REMARK 500 ARG A 305 -2.16 66.59 REMARK 500 HIS A 308 71.08 61.40 REMARK 500 PRO A 363 -177.36 -61.09 REMARK 500 LYS B 17 -112.34 50.21 REMARK 500 ASN B 206 166.53 177.36 REMARK 500 ASP B 251 -1.90 76.73 REMARK 500 SER B 323 -163.27 -79.08 REMARK 500 LEU B 324 95.72 69.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY B 325 GLY B 326 -147.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B2081 DISTANCE = 6.05 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1365 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 112 OG1 REMARK 620 2 HOH A2047 O 102.9 REMARK 620 3 HOH A2048 O 71.5 96.1 REMARK 620 4 HOH A2049 O 65.6 164.2 70.3 REMARK 620 5 HOH A2090 O 148.2 106.7 93.7 83.0 REMARK 620 6 ADP A2601 O1B 72.1 129.2 126.7 59.7 97.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1365 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 112 OG1 REMARK 620 2 HOH B2029 O 55.2 REMARK 620 3 HOH B2030 O 75.5 52.9 REMARK 620 4 HOH B2080 O 110.8 56.9 75.0 REMARK 620 5 ADP B2600 O1B 69.5 66.1 119.0 73.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1365 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 2000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 2601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1365 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 2600 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FKY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF KSP IN COMPLEX WITH INHIBITOR 13 REMARK 900 RELATED ID: 2X7C RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN KINESIN EG5 IN COMPLEX WITH (S)-ENASTRON REMARK 900 RELATED ID: 2XAE RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN KINESIN EG5 IN COMPLEX WITH (R)-2-AMINO- REMARK 900 3-((S)-2-METHYL-1,1-DIPHENYLBUTYLTHIO )PROPANOIC ACID REMARK 900 RELATED ID: 1Q0B RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE MOTOR PROTEIN KSP IN COMPLEX WITHADP AND REMARK 900 MONASTROL REMARK 900 RELATED ID: 2X2R RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN KINESIN EG5 IN COMPLEX WITH (R)-2-AMINO- REMARK 900 3-((4-CHLOROPHENYL)DIPHENYLMETHYLTHIO) PROPANOIC ACID REMARK 900 RELATED ID: 2FL6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF KSP IN COMPLEX WITH INHIBITOR 6 REMARK 900 RELATED ID: 2UYM RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF KSP IN COMPLEX WITH ADP AND THIOPHENE REMARK 900 CONTAINING INHIBITOR 37 REMARK 900 RELATED ID: 2X7D RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN KINESIN EG5 IN COMPLEX WITH (S)- REMARK 900 DIMETHYLENASTRON REMARK 900 RELATED ID: 2X7E RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN KINESIN EG5 IN COMPLEX WITH (R)- REMARK 900 FLUORASTROL REMARK 900 RELATED ID: 1II6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE MITOTIC KINESIN EG5 IN COMPLEXWITH MG-ADP. REMARK 900 RELATED ID: 2UYI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF KSP IN COMPLEX WITH ADP AND THIOPHENE REMARK 900 CONTAINING INHIBITOR 33 REMARK 900 RELATED ID: 2WOG RELATED DB: PDB REMARK 900 INTERMEDIATE AND FINAL STATES OF HUMAN KINESIN EG5 IN COMPLEX WITH REMARK 900 S-TRITYL-L-CYSTEINE REMARK 900 RELATED ID: 2G1Q RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF KSP IN COMPLEX WITH INHIBITOR 9H REMARK 900 RELATED ID: 1YRS RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF KSP IN COMPLEX WITH INHIBITOR 1 REMARK 900 RELATED ID: 2GM1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE MITOTIC KINESIN EG5 IN COMPLEXWITH MG-ADP REMARK 900 AND N-(3-AMINOPROPYL)-N-((3- BENZYL-5-CHLORO-4-OXO-3,4- REMARK 900 DIHYDROPYRROLO[2,1-F][ 1,2,4]TRIAZIN-2-YL)(CYCLOPROPYL)METHYL)-4- REMARK 900 METHYLBENZAMIDE REMARK 900 RELATED ID: 1X88 RELATED DB: PDB REMARK 900 HUMAN EG5 MOTOR DOMAIN BOUND TO MG-ADP AND MONASTROL REMARK 900 RELATED ID: 2FL2 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF KSP IN COMPLEX WITH INHIBITOR 19 DBREF 4A1Z A 1 368 UNP P52732 KIF11_HUMAN 1 368 DBREF 4A1Z B 1 368 UNP P52732 KIF11_HUMAN 1 368 SEQADV 4A1Z VAL A 130 UNP P52732 ASP 130 ENGINEERED MUTATION SEQADV 4A1Z VAL B 130 UNP P52732 ASP 130 ENGINEERED MUTATION SEQRES 1 A 368 MET ALA SER GLN PRO ASN SER SER ALA LYS LYS LYS GLU SEQRES 2 A 368 GLU LYS GLY LYS ASN ILE GLN VAL VAL VAL ARG CYS ARG SEQRES 3 A 368 PRO PHE ASN LEU ALA GLU ARG LYS ALA SER ALA HIS SER SEQRES 4 A 368 ILE VAL GLU CYS ASP PRO VAL ARG LYS GLU VAL SER VAL SEQRES 5 A 368 ARG THR GLY GLY LEU ALA ASP LYS SER SER ARG LYS THR SEQRES 6 A 368 TYR THR PHE ASP MET VAL PHE GLY ALA SER THR LYS GLN SEQRES 7 A 368 ILE ASP VAL TYR ARG SER VAL VAL CYS PRO ILE LEU ASP SEQRES 8 A 368 GLU VAL ILE MET GLY TYR ASN CYS THR ILE PHE ALA TYR SEQRES 9 A 368 GLY GLN THR GLY THR GLY LYS THR PHE THR MET GLU GLY SEQRES 10 A 368 GLU ARG SER PRO ASN GLU GLU TYR THR TRP GLU GLU VAL SEQRES 11 A 368 PRO LEU ALA GLY ILE ILE PRO ARG THR LEU HIS GLN ILE SEQRES 12 A 368 PHE GLU LYS LEU THR ASP ASN GLY THR GLU PHE SER VAL SEQRES 13 A 368 LYS VAL SER LEU LEU GLU ILE TYR ASN GLU GLU LEU PHE SEQRES 14 A 368 ASP LEU LEU ASN PRO SER SER ASP VAL SER GLU ARG LEU SEQRES 15 A 368 GLN MET PHE ASP ASP PRO ARG ASN LYS ARG GLY VAL ILE SEQRES 16 A 368 ILE LYS GLY LEU GLU GLU ILE THR VAL HIS ASN LYS ASP SEQRES 17 A 368 GLU VAL TYR GLN ILE LEU GLU LYS GLY ALA ALA LYS ARG SEQRES 18 A 368 THR THR ALA ALA THR LEU MET ASN ALA TYR SER SER ARG SEQRES 19 A 368 SER HIS SER VAL PHE SER VAL THR ILE HIS MET LYS GLU SEQRES 20 A 368 THR THR ILE ASP GLY GLU GLU LEU VAL LYS ILE GLY LYS SEQRES 21 A 368 LEU ASN LEU VAL ASP LEU ALA GLY SER GLU ASN ILE GLY SEQRES 22 A 368 ARG SER GLY ALA VAL ASP LYS ARG ALA ARG GLU ALA GLY SEQRES 23 A 368 ASN ILE ASN GLN SER LEU LEU THR LEU GLY ARG VAL ILE SEQRES 24 A 368 THR ALA LEU VAL GLU ARG THR PRO HIS VAL PRO TYR ARG SEQRES 25 A 368 GLU SER LYS LEU THR ARG ILE LEU GLN ASP SER LEU GLY SEQRES 26 A 368 GLY ARG THR ARG THR SER ILE ILE ALA THR ILE SER PRO SEQRES 27 A 368 ALA SER LEU ASN LEU GLU GLU THR LEU SER THR LEU GLU SEQRES 28 A 368 TYR ALA HIS ARG ALA LYS ASN ILE LEU ASN LYS PRO GLU SEQRES 29 A 368 VAL ASN GLN LYS SEQRES 1 B 368 MET ALA SER GLN PRO ASN SER SER ALA LYS LYS LYS GLU SEQRES 2 B 368 GLU LYS GLY LYS ASN ILE GLN VAL VAL VAL ARG CYS ARG SEQRES 3 B 368 PRO PHE ASN LEU ALA GLU ARG LYS ALA SER ALA HIS SER SEQRES 4 B 368 ILE VAL GLU CYS ASP PRO VAL ARG LYS GLU VAL SER VAL SEQRES 5 B 368 ARG THR GLY GLY LEU ALA ASP LYS SER SER ARG LYS THR SEQRES 6 B 368 TYR THR PHE ASP MET VAL PHE GLY ALA SER THR LYS GLN SEQRES 7 B 368 ILE ASP VAL TYR ARG SER VAL VAL CYS PRO ILE LEU ASP SEQRES 8 B 368 GLU VAL ILE MET GLY TYR ASN CYS THR ILE PHE ALA TYR SEQRES 9 B 368 GLY GLN THR GLY THR GLY LYS THR PHE THR MET GLU GLY SEQRES 10 B 368 GLU ARG SER PRO ASN GLU GLU TYR THR TRP GLU GLU VAL SEQRES 11 B 368 PRO LEU ALA GLY ILE ILE PRO ARG THR LEU HIS GLN ILE SEQRES 12 B 368 PHE GLU LYS LEU THR ASP ASN GLY THR GLU PHE SER VAL SEQRES 13 B 368 LYS VAL SER LEU LEU GLU ILE TYR ASN GLU GLU LEU PHE SEQRES 14 B 368 ASP LEU LEU ASN PRO SER SER ASP VAL SER GLU ARG LEU SEQRES 15 B 368 GLN MET PHE ASP ASP PRO ARG ASN LYS ARG GLY VAL ILE SEQRES 16 B 368 ILE LYS GLY LEU GLU GLU ILE THR VAL HIS ASN LYS ASP SEQRES 17 B 368 GLU VAL TYR GLN ILE LEU GLU LYS GLY ALA ALA LYS ARG SEQRES 18 B 368 THR THR ALA ALA THR LEU MET ASN ALA TYR SER SER ARG SEQRES 19 B 368 SER HIS SER VAL PHE SER VAL THR ILE HIS MET LYS GLU SEQRES 20 B 368 THR THR ILE ASP GLY GLU GLU LEU VAL LYS ILE GLY LYS SEQRES 21 B 368 LEU ASN LEU VAL ASP LEU ALA GLY SER GLU ASN ILE GLY SEQRES 22 B 368 ARG SER GLY ALA VAL ASP LYS ARG ALA ARG GLU ALA GLY SEQRES 23 B 368 ASN ILE ASN GLN SER LEU LEU THR LEU GLY ARG VAL ILE SEQRES 24 B 368 THR ALA LEU VAL GLU ARG THR PRO HIS VAL PRO TYR ARG SEQRES 25 B 368 GLU SER LYS LEU THR ARG ILE LEU GLN ASP SER LEU GLY SEQRES 26 B 368 GLY ARG THR ARG THR SER ILE ILE ALA THR ILE SER PRO SEQRES 27 B 368 ALA SER LEU ASN LEU GLU GLU THR LEU SER THR LEU GLU SEQRES 28 B 368 TYR ALA HIS ARG ALA LYS ASN ILE LEU ASN LYS PRO GLU SEQRES 29 B 368 VAL ASN GLN LYS HET MG A1365 1 HET NO3 A2000 4 HET NO3 A2001 4 HET ADP A2601 27 HET MG B1365 1 HET ADP B2600 27 HETNAM MG MAGNESIUM ION HETNAM NO3 NITRATE ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 3 MG 2(MG 2+) FORMUL 4 NO3 2(N O3 1-) FORMUL 6 ADP 2(C10 H15 N5 O10 P2) FORMUL 9 HOH *170(H2 O) HELIX 1 1 ASN A 29 ALA A 35 1 7 HELIX 2 2 LYS A 77 MET A 95 1 19 HELIX 3 3 GLY A 110 GLU A 116 1 7 HELIX 4 4 GLY A 134 GLY A 151 1 18 HELIX 5 5 ASN A 206 ASP A 208 5 3 HELIX 6 6 GLU A 209 ASN A 229 1 21 HELIX 7 7 TYR A 231 SER A 235 5 5 HELIX 8 8 GLU A 284 GLU A 304 1 21 HELIX 9 9 SER A 314 LEU A 320 1 7 HELIX 10 10 LEU A 320 GLY A 325 1 6 HELIX 11 11 ASN A 342 LYS A 357 1 16 HELIX 12 12 ASN B 29 ALA B 35 1 7 HELIX 13 13 LYS B 77 MET B 95 1 19 HELIX 14 14 GLY B 110 GLU B 116 1 7 HELIX 15 15 GLY B 134 ASN B 150 1 17 HELIX 16 16 ASP B 208 ASN B 229 1 22 HELIX 17 17 GLY B 268 ILE B 272 5 5 HELIX 18 18 ASN B 289 ARG B 305 1 17 HELIX 19 19 PRO B 310 GLU B 313 5 4 HELIX 20 20 SER B 314 GLN B 321 1 8 HELIX 21 21 ASN B 342 LYS B 357 1 16 SHEET 1 AA 8 MET A 70 PHE A 72 0 SHEET 2 AA 8 ILE A 19 CYS A 25 1 O VAL A 23 N PHE A 72 SHEET 3 AA 8 THR A 330 ILE A 336 1 O THR A 330 N GLN A 20 SHEET 4 AA 8 ASN A 98 GLY A 105 1 O THR A 100 N SER A 331 SHEET 5 AA 8 LEU A 255 ASP A 265 1 O LYS A 260 N CYS A 99 SHEET 6 AA 8 HIS A 236 GLU A 247 -1 O SER A 237 N ASP A 265 SHEET 7 AA 8 GLU A 153 TYR A 164 -1 O GLU A 153 N LYS A 246 SHEET 8 AA 8 GLU A 167 ASP A 170 -1 O GLU A 167 N TYR A 164 SHEET 1 AB 8 MET A 70 PHE A 72 0 SHEET 2 AB 8 ILE A 19 CYS A 25 1 O VAL A 23 N PHE A 72 SHEET 3 AB 8 THR A 330 ILE A 336 1 O THR A 330 N GLN A 20 SHEET 4 AB 8 ASN A 98 GLY A 105 1 O THR A 100 N SER A 331 SHEET 5 AB 8 LEU A 255 ASP A 265 1 O LYS A 260 N CYS A 99 SHEET 6 AB 8 HIS A 236 GLU A 247 -1 O SER A 237 N ASP A 265 SHEET 7 AB 8 GLU A 153 TYR A 164 -1 O GLU A 153 N LYS A 246 SHEET 8 AB 8 ILE A 202 VAL A 204 -1 O ILE A 202 N VAL A 158 SHEET 1 AC 2 GLU A 167 ASP A 170 0 SHEET 2 AC 2 GLU A 153 TYR A 164 -1 O GLU A 162 N PHE A 169 SHEET 1 AD 3 VAL A 41 ASP A 44 0 SHEET 2 AD 3 GLU A 49 ARG A 53 -1 O GLU A 49 N ASP A 44 SHEET 3 AD 3 ARG A 63 THR A 67 -1 O LYS A 64 N VAL A 52 SHEET 1 AE 2 GLN A 183 PHE A 185 0 SHEET 2 AE 2 ILE A 195 LYS A 197 -1 O ILE A 195 N PHE A 185 SHEET 1 BA 8 MET B 70 PHE B 72 0 SHEET 2 BA 8 ILE B 19 CYS B 25 1 O VAL B 23 N PHE B 72 SHEET 3 BA 8 THR B 330 ILE B 336 1 O THR B 330 N GLN B 20 SHEET 4 BA 8 ASN B 98 GLY B 105 1 O THR B 100 N SER B 331 SHEET 5 BA 8 GLU B 254 ASP B 265 1 O LYS B 260 N CYS B 99 SHEET 6 BA 8 HIS B 236 THR B 248 -1 O SER B 237 N ASP B 265 SHEET 7 BA 8 GLU B 153 ILE B 163 -1 O GLU B 153 N LYS B 246 SHEET 8 BA 8 LEU B 168 ASP B 170 -1 O PHE B 169 N GLU B 162 SHEET 1 BB 8 MET B 70 PHE B 72 0 SHEET 2 BB 8 ILE B 19 CYS B 25 1 O VAL B 23 N PHE B 72 SHEET 3 BB 8 THR B 330 ILE B 336 1 O THR B 330 N GLN B 20 SHEET 4 BB 8 ASN B 98 GLY B 105 1 O THR B 100 N SER B 331 SHEET 5 BB 8 GLU B 254 ASP B 265 1 O LYS B 260 N CYS B 99 SHEET 6 BB 8 HIS B 236 THR B 248 -1 O SER B 237 N ASP B 265 SHEET 7 BB 8 GLU B 153 ILE B 163 -1 O GLU B 153 N LYS B 246 SHEET 8 BB 8 ILE B 202 VAL B 204 -1 O ILE B 202 N VAL B 158 SHEET 1 BC 2 LEU B 168 ASP B 170 0 SHEET 2 BC 2 GLU B 153 ILE B 163 -1 O GLU B 162 N PHE B 169 SHEET 1 BD 3 VAL B 41 ASP B 44 0 SHEET 2 BD 3 GLU B 49 ARG B 53 -1 O GLU B 49 N ASP B 44 SHEET 3 BD 3 ARG B 63 THR B 67 -1 O LYS B 64 N VAL B 52 SHEET 1 BE 2 MET B 184 ASP B 187 0 SHEET 2 BE 2 ASN B 190 ILE B 196 -1 O ASN B 190 N ASP B 187 LINK OG1 THR A 112 MG MG A1365 1555 1555 2.32 LINK MG MG A1365 O HOH A2047 1555 1555 2.14 LINK MG MG A1365 O HOH A2048 1555 1555 2.28 LINK MG MG A1365 O HOH A2049 1555 1555 2.24 LINK MG MG A1365 O HOH A2090 1555 1555 2.57 LINK MG MG A1365 O1B ADP A2601 1555 1555 2.38 LINK OG1 THR B 112 MG MG B1365 1555 1555 2.29 LINK MG MG B1365 O HOH B2029 1555 1555 2.72 LINK MG MG B1365 O HOH B2030 1555 1555 2.14 LINK MG MG B1365 O HOH B2080 1555 1555 2.54 LINK MG MG B1365 O1B ADP B2600 1555 1555 2.26 SITE 1 AC1 6 THR A 112 HOH A2047 HOH A2048 HOH A2049 SITE 2 AC1 6 HOH A2090 ADP A2601 SITE 1 AC2 7 ALA A 37 SER A 340 LEU A 341 HOH A2014 SITE 2 AC2 7 TYR B 231 SER B 233 ARG B 234 SITE 1 AC3 6 GLU A 166 HIS A 236 ASN A 287 SER A 291 SITE 2 AC3 6 LYS A 315 LEU A 316 SITE 1 AC4 16 ARG A 24 ARG A 26 PRO A 27 THR A 107 SITE 2 AC4 16 GLY A 108 THR A 109 GLY A 110 LYS A 111 SITE 3 AC4 16 THR A 112 PHE A 113 GLU A 118 MG A1365 SITE 4 AC4 16 HOH A2049 HOH A2090 HOH A2091 LYS B 34 SITE 1 AC5 5 THR B 112 HOH B2029 HOH B2030 HOH B2080 SITE 2 AC5 5 ADP B2600 SITE 1 AC6 15 LYS A 34 HOH A2011 ARG B 26 PRO B 27 SITE 2 AC6 15 THR B 107 GLY B 108 THR B 109 GLY B 110 SITE 3 AC6 15 LYS B 111 THR B 112 PHE B 113 GLU B 118 SITE 4 AC6 15 MG B1365 HOH B2029 HOH B2080 CRYST1 51.484 78.390 93.265 90.00 93.47 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019424 0.000000 0.001178 0.00000 SCALE2 0.000000 0.012757 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010742 0.00000