HEADER TRANSFERASE 01-MAY-09 3HA8 TITLE THE COMPLEX STRUCTURE OF THE MAP KINASE P38/COMPOUND 14B COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 14; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MITOGEN-ACTIVATED PROTEIN KINASE P38 ALPHA, MAP KINASE P38 COMPND 5 ALPHA, CYTOKINE SUPPRESSIVE ANTI-INFLAMMATORY DRUG-BINDING PROTEIN, COMPND 6 CSAID-BINDING PROTEIN, CSBP, MAX-INTERACTING PROTEIN 2, MAP KINASE COMPND 7 MXI2, SAPK2A; COMPND 8 EC: 2.7.11.24; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CSBP, CSBP1, CSBP2, CSPB1, MAPK14, MXI2, P38; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS TRANSFERASE, INHIBITOR, MAP KINASE, SERINE/ THREONINE-PROTEIN KINASE, KEYWDS 2 P38, ATP-BINDING, KINASE, NUCLEOTIDE-BINDING, NUCLEUS, KEYWDS 3 PHOSPHOPROTEIN, SERINE/THREONINE-PROTEIN KINASE EXPDTA X-RAY DIFFRACTION AUTHOR B.ZHAO,M.A.CLARK REVDAT 3 13-JUL-11 3HA8 1 VERSN REVDAT 2 08-SEP-10 3HA8 1 JRNL REVDAT 1 04-AUG-09 3HA8 0 JRNL AUTH M.A.CLARK,R.A.ACHARYA,C.C.ARICO-MUENDEL,S.L.BELYANSKAYA, JRNL AUTH 2 D.R.BENJAMIN,N.R.CARLSON,P.A.CENTRELLA,C.H.CHIU,S.P.CREASER, JRNL AUTH 3 J.W.CUOZZO,C.P.DAVIE,Y.DING,G.J.FRANKLIN,K.D.FRANZEN, JRNL AUTH 4 M.L.GEFTER,S.P.HALE,N.J.HANSEN,D.I.ISRAEL,J.JIANG, JRNL AUTH 5 M.J.KAVARANA,M.S.KELLEY,C.S.KOLLMANN,F.LI,K.LIND,S.MATARUSE, JRNL AUTH 6 P.F.MEDEIROS,J.A.MESSER,P.MYERS,H.O'KEEFE,M.C.OLIFF, JRNL AUTH 7 C.E.RISE,A.L.SATZ,S.R.SKINNER,J.L.SVENDSEN,L.TANG, JRNL AUTH 8 K.VAN VLOTEN,R.W.WAGNER,G.YAO,B.ZHAO,B.A.MORGAN JRNL TITL DESIGN, SYNTHESIS AND SELECTION OF DNA-ENCODED JRNL TITL 2 SMALL-MOLECULE LIBRARIES. JRNL REF NAT.CHEM.BIOL. V. 5 647 2009 JRNL REFN ISSN 1552-4450 JRNL PMID 19648931 JRNL DOI 10.1038/NCHEMBIO.211 REMARK 2 REMARK 2 RESOLUTION. 2.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.8 REMARK 3 NUMBER OF REFLECTIONS : 15683 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.900 REMARK 3 FREE R VALUE TEST SET COUNT : 982 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.48 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 REFLECTION IN BIN (WORKING SET) : 877 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 70.30 REMARK 3 BIN R VALUE (WORKING SET) : 0.3430 REMARK 3 BIN FREE R VALUE SET COUNT : 46 REMARK 3 BIN FREE R VALUE : 0.4740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2725 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 49 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.13000 REMARK 3 B22 (A**2) : -1.79000 REMARK 3 B33 (A**2) : 0.66000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.451 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.274 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.210 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.313 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2853 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3883 ; 1.069 ; 1.983 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 342 ; 5.112 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 126 ;35.265 ;23.968 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 476 ;15.202 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;17.086 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 432 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2213 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1200 ; 0.182 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1970 ; 0.302 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 98 ; 0.124 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 36 ; 0.141 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.187 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1760 ; 0.325 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2778 ; 0.591 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1251 ; 0.632 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1105 ; 1.033 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 109 REMARK 3 ORIGIN FOR THE GROUP (A): 11.7207 12.0250 24.6887 REMARK 3 T TENSOR REMARK 3 T11: -0.1721 T22: -0.0894 REMARK 3 T33: 0.0154 T12: 0.0434 REMARK 3 T13: -0.0313 T23: -0.0849 REMARK 3 L TENSOR REMARK 3 L11: 2.7528 L22: 4.3307 REMARK 3 L33: 4.2846 L12: 0.7298 REMARK 3 L13: -0.6825 L23: 2.4133 REMARK 3 S TENSOR REMARK 3 S11: -0.1539 S12: 0.0379 S13: 0.6528 REMARK 3 S21: -0.5367 S22: 0.2162 S23: -0.5353 REMARK 3 S31: -0.4717 S32: 0.0678 S33: -0.0623 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 110 A 121 REMARK 3 ORIGIN FOR THE GROUP (A): -12.6522 9.9848 34.7883 REMARK 3 T TENSOR REMARK 3 T11: 0.1022 T22: 0.2500 REMARK 3 T33: 0.1615 T12: -0.0306 REMARK 3 T13: 0.0298 T23: -0.0497 REMARK 3 L TENSOR REMARK 3 L11: 20.0518 L22: 12.8326 REMARK 3 L33: 7.8563 L12: 3.4318 REMARK 3 L13: -5.5883 L23: 3.4232 REMARK 3 S TENSOR REMARK 3 S11: 0.1533 S12: 1.8700 S13: -0.4331 REMARK 3 S21: -0.0724 S22: -0.1172 S23: 2.7414 REMARK 3 S31: 0.1615 S32: -2.3934 S33: -0.0361 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 122 A 320 REMARK 3 ORIGIN FOR THE GROUP (A): -7.1232 21.2781 48.6282 REMARK 3 T TENSOR REMARK 3 T11: -0.0899 T22: -0.0948 REMARK 3 T33: -0.2665 T12: 0.0247 REMARK 3 T13: -0.0385 T23: 0.0191 REMARK 3 L TENSOR REMARK 3 L11: 3.0422 L22: 6.4901 REMARK 3 L33: 2.1628 L12: -2.5572 REMARK 3 L13: -0.8462 L23: 1.6340 REMARK 3 S TENSOR REMARK 3 S11: -0.1492 S12: -0.0580 S13: 0.0604 REMARK 3 S21: 0.6806 S22: 0.2675 S23: 0.0023 REMARK 3 S31: 0.2960 S32: 0.1422 S33: -0.1183 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 321 A 352 REMARK 3 ORIGIN FOR THE GROUP (A): 20.8363 19.7889 34.4957 REMARK 3 T TENSOR REMARK 3 T11: -0.2005 T22: 0.0816 REMARK 3 T33: 0.3132 T12: 0.0478 REMARK 3 T13: -0.1584 T23: -0.1630 REMARK 3 L TENSOR REMARK 3 L11: 4.0043 L22: 6.3772 REMARK 3 L33: 4.3541 L12: 3.5104 REMARK 3 L13: -0.9659 L23: 0.8812 REMARK 3 S TENSOR REMARK 3 S11: 0.1489 S12: -0.4153 S13: 0.2949 REMARK 3 S21: -0.0228 S22: 0.1405 S23: -0.1512 REMARK 3 S31: -0.2369 S32: 0.4646 S33: -0.2894 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 361 A 361 REMARK 3 ORIGIN FOR THE GROUP (A): -0.4029 11.3642 28.3521 REMARK 3 T TENSOR REMARK 3 T11: -0.3803 T22: 0.1107 REMARK 3 T33: -0.1656 T12: 0.1530 REMARK 3 T13: -0.0380 T23: -0.0684 REMARK 3 L TENSOR REMARK 3 L11: 2.0093 L22: 5.3624 REMARK 3 L33: 24.6968 L12: -3.2155 REMARK 3 L13: 5.9858 L23: -10.7981 REMARK 3 S TENSOR REMARK 3 S11: -0.0999 S12: 2.2282 S13: 0.4830 REMARK 3 S21: -0.0721 S22: 0.4317 S23: -0.1583 REMARK 3 S31: -0.5168 S32: -0.8394 S33: -0.3318 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3HA8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAY-09. REMARK 100 THE RCSB ID CODE IS RCSB052887. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17710 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.480 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1BMK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.11100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.75050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.96700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.75050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.11100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.96700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLN A 3 REMARK 465 GLY A 170 REMARK 465 LEU A 171 REMARK 465 ALA A 172 REMARK 465 ARG A 173 REMARK 465 HIS A 174 REMARK 465 THR A 175 REMARK 465 ASP A 176 REMARK 465 LEU A 353 REMARK 465 ASP A 354 REMARK 465 GLN A 355 REMARK 465 GLU A 356 REMARK 465 GLU A 357 REMARK 465 MET A 358 REMARK 465 GLU A 359 REMARK 465 SER A 360 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 4 CB CG CD OE1 OE2 REMARK 470 LYS A 45 CD CE NZ REMARK 470 ARG A 49 NE CZ NH1 NH2 REMARK 470 LYS A 121 CG CD CE NZ REMARK 470 ASP A 177 CG OD1 OD2 REMARK 470 GLU A 178 CG CD OE1 OE2 REMARK 470 ARG A 237 CD NE CZ NH1 NH2 REMARK 470 GLU A 253 CD OE1 OE2 REMARK 470 SER A 254 CB OG REMARK 470 ASP A 331 CG OD1 OD2 REMARK 470 ASP A 335 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 283 NZ LYS A 287 1.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 14 82.49 38.41 REMARK 500 ASN A 100 -30.80 -135.05 REMARK 500 ARG A 149 -26.27 79.66 REMARK 500 ASP A 168 72.99 56.43 REMARK 500 ASN A 201 -168.80 -112.12 REMARK 500 LEU A 289 46.12 -93.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 5JZ A 361 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3HA6 RELATED DB: PDB DBREF 3HA8 A 1 360 UNP Q16539 MK14_HUMAN 1 360 SEQADV 3HA8 GLY A -18 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 SER A -17 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 SER A -16 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 HIS A -15 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 HIS A -14 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 HIS A -13 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 HIS A -12 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 HIS A -11 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 HIS A -10 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 SER A -9 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 SER A -8 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 GLY A -7 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 LEU A -6 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 VAL A -5 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 PRO A -4 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 ARG A -3 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 GLY A -2 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 SER A -1 UNP Q16539 EXPRESSION TAG SEQADV 3HA8 HIS A 0 UNP Q16539 EXPRESSION TAG SEQRES 1 A 379 GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY LEU SEQRES 2 A 379 VAL PRO ARG GLY SER HIS MET SER GLN GLU ARG PRO THR SEQRES 3 A 379 PHE TYR ARG GLN GLU LEU ASN LYS THR ILE TRP GLU VAL SEQRES 4 A 379 PRO GLU ARG TYR GLN ASN LEU SER PRO VAL GLY SER GLY SEQRES 5 A 379 ALA TYR GLY SER VAL CYS ALA ALA PHE ASP THR LYS THR SEQRES 6 A 379 GLY LEU ARG VAL ALA VAL LYS LYS LEU SER ARG PRO PHE SEQRES 7 A 379 GLN SER ILE ILE HIS ALA LYS ARG THR TYR ARG GLU LEU SEQRES 8 A 379 ARG LEU LEU LYS HIS MET LYS HIS GLU ASN VAL ILE GLY SEQRES 9 A 379 LEU LEU ASP VAL PHE THR PRO ALA ARG SER LEU GLU GLU SEQRES 10 A 379 PHE ASN ASP VAL TYR LEU VAL THR HIS LEU MET GLY ALA SEQRES 11 A 379 ASP LEU ASN ASN ILE VAL LYS CYS GLN LYS LEU THR ASP SEQRES 12 A 379 ASP HIS VAL GLN PHE LEU ILE TYR GLN ILE LEU ARG GLY SEQRES 13 A 379 LEU LYS TYR ILE HIS SER ALA ASP ILE ILE HIS ARG ASP SEQRES 14 A 379 LEU LYS PRO SER ASN LEU ALA VAL ASN GLU ASP CYS GLU SEQRES 15 A 379 LEU LYS ILE LEU ASP PHE GLY LEU ALA ARG HIS THR ASP SEQRES 16 A 379 ASP GLU MET THR GLY TYR VAL ALA THR ARG TRP TYR ARG SEQRES 17 A 379 ALA PRO GLU ILE MET LEU ASN TRP MET HIS TYR ASN GLN SEQRES 18 A 379 THR VAL ASP ILE TRP SER VAL GLY CYS ILE MET ALA GLU SEQRES 19 A 379 LEU LEU THR GLY ARG THR LEU PHE PRO GLY THR ASP HIS SEQRES 20 A 379 ILE ASP GLN LEU LYS LEU ILE LEU ARG LEU VAL GLY THR SEQRES 21 A 379 PRO GLY ALA GLU LEU LEU LYS LYS ILE SER SER GLU SER SEQRES 22 A 379 ALA ARG ASN TYR ILE GLN SER LEU THR GLN MET PRO LYS SEQRES 23 A 379 MET ASN PHE ALA ASN VAL PHE ILE GLY ALA ASN PRO LEU SEQRES 24 A 379 ALA VAL ASP LEU LEU GLU LYS MET LEU VAL LEU ASP SER SEQRES 25 A 379 ASP LYS ARG ILE THR ALA ALA GLN ALA LEU ALA HIS ALA SEQRES 26 A 379 TYR PHE ALA GLN TYR HIS ASP PRO ASP ASP GLU PRO VAL SEQRES 27 A 379 ALA ASP PRO TYR ASP GLN SER PHE GLU SER ARG ASP LEU SEQRES 28 A 379 LEU ILE ASP GLU TRP LYS SER LEU THR TYR ASP GLU VAL SEQRES 29 A 379 ILE SER PHE VAL PRO PRO PRO LEU ASP GLN GLU GLU MET SEQRES 30 A 379 GLU SER HET 5JZ A 361 49 HETNAM 5JZ N~2~-{4-[6-(3,4-DIHYDROQUINOLIN-1(2H)-YLCARBONYL)-1H- HETNAM 2 5JZ BENZIMIDAZOL-1-YL]-6-ETHOXY-1,3,5-TRIAZIN-2-YL}-3-(2, HETNAM 3 5JZ 2-DIMETHYL-4H-1,3-BENZODIOXIN-6-YL)-N-METHYL-L- HETNAM 4 5JZ ALANINAMIDE FORMUL 2 5JZ C36 H38 N8 O5 FORMUL 3 HOH *49(H2 O) HELIX 1 1 SER A 61 MET A 78 1 18 HELIX 2 2 LEU A 113 LYS A 118 1 6 HELIX 3 3 THR A 123 ALA A 144 1 22 HELIX 4 4 LYS A 152 SER A 154 5 3 HELIX 5 5 VAL A 183 TRP A 187 5 5 HELIX 6 6 ALA A 190 LEU A 195 1 6 HELIX 7 7 THR A 203 GLY A 219 1 17 HELIX 8 8 ASP A 227 GLY A 240 1 14 HELIX 9 9 GLY A 243 ILE A 250 1 8 HELIX 10 10 SER A 252 GLN A 260 1 9 HELIX 11 11 ASN A 269 PHE A 274 1 6 HELIX 12 12 ASN A 278 LEU A 289 1 12 HELIX 13 13 ASP A 292 ARG A 296 5 5 HELIX 14 14 THR A 298 ALA A 304 1 7 HELIX 15 15 HIS A 305 ALA A 309 5 5 HELIX 16 16 GLN A 325 ARG A 330 5 6 HELIX 17 17 LEU A 333 SER A 347 1 15 SHEET 1 A 2 PHE A 8 GLU A 12 0 SHEET 2 A 2 ILE A 17 PRO A 21 -1 O TRP A 18 N GLN A 11 SHEET 1 B 5 TYR A 24 GLY A 31 0 SHEET 2 B 5 SER A 37 ASP A 43 -1 O ALA A 40 N SER A 28 SHEET 3 B 5 LEU A 48 LYS A 54 -1 O VAL A 50 N ALA A 41 SHEET 4 B 5 TYR A 103 HIS A 107 -1 O THR A 106 N ALA A 51 SHEET 5 B 5 ASP A 88 PHE A 90 -1 N ASP A 88 O VAL A 105 SHEET 1 C 3 ALA A 111 ASP A 112 0 SHEET 2 C 3 LEU A 156 VAL A 158 -1 O VAL A 158 N ALA A 111 SHEET 3 C 3 LEU A 164 ILE A 166 -1 O LYS A 165 N ALA A 157 SITE 1 AC1 17 VAL A 30 GLY A 31 ALA A 51 LYS A 53 SITE 2 AC1 17 LEU A 104 THR A 106 LEU A 108 MET A 109 SITE 3 AC1 17 GLY A 110 ALA A 111 ASP A 112 SER A 154 SITE 4 AC1 17 ALA A 157 LEU A 167 HOH A 376 HOH A 388 SITE 5 AC1 17 HOH A 406 CRYST1 46.222 87.934 121.501 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021635 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011372 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008230 0.00000