HEADER TRANSFERASE 23-AUG-08 3E9R TITLE CRYSTAL STRUCTURE OF PURINE NUCLEOSIDE PHOSPHORYLASE FROM SCHISTOSOMA TITLE 2 MANSONI IN COMPLEX WITH ADENINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PURINE-NUCLEOSIDE PHOSPHORYLASE; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 2.4.2.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHISTOSOMA MANSONI; SOURCE 3 ORGANISM_COMMON: BLOOD FLUKE; SOURCE 4 ORGANISM_TAXID: 6183; SOURCE 5 GENE: SMPNP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: DH5ALPHA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMAL-C2G KEYWDS PURINE NUCLEOSIDE PHOSPHORYLASE, GLYCOSYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.M.PEREIRA,M.M.REZENDE,G.OLIVA,R.C.GARRATT REVDAT 3 25-OCT-17 3E9R 1 REMARK REVDAT 2 26-JAN-10 3E9R 1 JRNL REVDAT 1 01-SEP-09 3E9R 0 JRNL AUTH H.M.PEREIRA,M.M.REZENDE,M.S.CASTILHO,G.OLIVA,R.C.GARRATT JRNL TITL ADENOSINE BINDING TO LOW-MOLECULAR-WEIGHT PURINE NUCLEOSIDE JRNL TITL 2 PHOSPHORYLASE: THE STRUCTURAL BASIS FOR RECOGNITION BASED ON JRNL TITL 3 ITS COMPLEX WITH THE ENZYME FROM SCHISTOSOMA MANSONI. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 66 73 2010 JRNL REFN ISSN 0907-4449 JRNL PMID 20057051 JRNL DOI 10.1107/S0907444909045715 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 64600 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 3266 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.0390 - 5.2580 0.98 2920 154 0.1840 0.2020 REMARK 3 2 5.2580 - 4.1740 1.00 2831 170 0.1340 0.1470 REMARK 3 3 4.1740 - 3.6470 1.00 2803 155 0.1320 0.1680 REMARK 3 4 3.6470 - 3.3140 1.00 2801 140 0.1420 0.2070 REMARK 3 5 3.3140 - 3.0760 1.00 2774 123 0.1560 0.1800 REMARK 3 6 3.0760 - 2.8950 1.00 2774 141 0.1640 0.2150 REMARK 3 7 2.8950 - 2.7500 1.00 2756 146 0.1600 0.2240 REMARK 3 8 2.7500 - 2.6310 0.99 2715 174 0.1600 0.1960 REMARK 3 9 2.6310 - 2.5290 0.99 2726 148 0.1620 0.2310 REMARK 3 10 2.5290 - 2.4420 0.99 2692 150 0.1580 0.2100 REMARK 3 11 2.4420 - 2.3660 0.99 2699 168 0.1550 0.2090 REMARK 3 12 2.3660 - 2.2980 0.98 2708 132 0.1530 0.1950 REMARK 3 13 2.2980 - 2.2370 0.98 2676 125 0.1510 0.1970 REMARK 3 14 2.2370 - 2.1830 0.98 2666 159 0.1490 0.2160 REMARK 3 15 2.1830 - 2.1330 0.97 2629 144 0.1590 0.1950 REMARK 3 16 2.1330 - 2.0880 0.92 2556 128 0.1710 0.2420 REMARK 3 17 2.0880 - 2.0460 0.92 2510 128 0.2240 0.2400 REMARK 3 18 2.0460 - 2.0070 0.95 2608 135 0.1810 0.2230 REMARK 3 19 2.0070 - 1.9720 0.95 2565 127 0.1930 0.2500 REMARK 3 20 1.9720 - 1.9380 0.92 2492 118 0.1970 0.2250 REMARK 3 21 1.9380 - 1.9070 0.93 2547 137 0.2050 0.2340 REMARK 3 22 1.9070 - 1.8780 0.90 2416 136 0.2060 0.2430 REMARK 3 23 1.8780 - 1.8500 0.89 2470 128 0.2230 0.2550 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 53.03 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.50600 REMARK 3 B22 (A**2) : -4.70800 REMARK 3 B33 (A**2) : -2.42800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 6544 REMARK 3 ANGLE : 1.111 8867 REMARK 3 CHIRALITY : 0.073 1035 REMARK 3 PLANARITY : 0.006 1139 REMARK 3 DIHEDRAL : 16.761 2378 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3E9R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-AUG-08. REMARK 100 THE DEPOSITION ID IS D_1000049053. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.9-5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.20000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66688 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 45.880 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : 0.07800 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.36500 REMARK 200 R SYM FOR SHELL (I) : 0.36500 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1TD1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18-20% PEG 1500, 20% GLYCEROL, 32MM REMARK 280 SODIUM ACETATE, VAPOR DIFFUSION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.49450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.49100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 59.99750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.49100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.49450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 59.99750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 MET B 1 REMARK 465 HIS B 2 REMARK 465 GLU B 3 REMARK 465 VAL B 63 REMARK 465 VAL B 64 REMARK 465 GLY B 65 REMARK 465 HIS B 66 REMARK 465 SER B 253 REMARK 465 ASP B 254 REMARK 465 LEU B 255 REMARK 465 LYS B 256 REMARK 465 PRO B 257 REMARK 465 ASN B 258 REMARK 465 HIS B 259 REMARK 465 MET C 1 REMARK 465 HIS C 2 REMARK 465 GLU C 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 3 CG CD OE1 OE2 REMARK 470 VAL A 64 CG1 CG2 REMARK 470 SER B 4 OG REMARK 470 LEU B 40 CG CD1 CD2 REMARK 470 GLU B 252 CG CD OE1 OE2 REMARK 470 VAL B 262 CG1 CG2 REMARK 470 LEU B 263 CG CD1 CD2 REMARK 470 THR B 265 OG1 CG2 REMARK 470 SER C 4 OG REMARK 470 ASP C 254 CG OD1 OD2 REMARK 470 LEU C 255 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N ASN C 166 O HOH C 863 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 7 48.36 -78.42 REMARK 500 VAL A 64 -115.72 57.85 REMARK 500 LEU A 145 13.31 82.62 REMARK 500 THR A 223 -48.21 76.43 REMARK 500 SER B 35 87.96 -64.00 REMARK 500 LYS B 39 -10.90 67.22 REMARK 500 LEU B 40 36.03 -72.12 REMARK 500 ALA B 41 86.54 161.95 REMARK 500 ASP B 42 18.01 -177.99 REMARK 500 ASN B 57 -11.72 78.66 REMARK 500 LEU B 145 18.31 87.24 REMARK 500 THR B 223 -57.64 78.79 REMARK 500 ASN C 57 -0.51 74.28 REMARK 500 VAL C 64 50.68 32.79 REMARK 500 LEU C 145 13.31 81.98 REMARK 500 ASN C 166 50.96 -111.85 REMARK 500 THR C 223 -51.77 78.38 REMARK 500 LYS C 286 56.67 83.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 291 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADE B 288 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 291 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS B 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 291 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT C 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DMS C 703 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1TCV RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PURINE NUCLEOSIDE PHOSPHORYLASE FROM REMARK 900 SCHISTOSOMA MANSONI IN COMPLEX WITH NON-DETERGENT SULFOBETAINE 195 REMARK 900 AND ACETATE REMARK 900 RELATED ID: 1TD1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PURINE NUCLEOSIDE PHOSPHORYLASE FROM REMARK 900 SCHISTOSOMA MANSONI IN COMPLEX WITH ACETATE REMARK 900 RELATED ID: 1TCU RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PURINE NUCLEOSIDE PHOSPHORYLASE FROM REMARK 900 SCHISTOSOMA MANSONI IN COMPLEX WITH PHOSPHATE AND ACETATE REMARK 900 RELATED ID: 3E9Z RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PURINE NUCLEOSIDE PHOSPHORYLASE FROM REMARK 900 SCHISTOSOMA MANSONI IN COMPLEX WITH 6-CHLOROGUANINE DBREF 3E9R A 1 287 UNP Q9BMI9 Q9BMI9_SCHMA 1 287 DBREF 3E9R B 1 287 UNP Q9BMI9 Q9BMI9_SCHMA 1 287 DBREF 3E9R C 1 287 UNP Q9BMI9 Q9BMI9_SCHMA 1 287 SEQRES 1 A 287 MET HIS GLU SER VAL THR ALA ASN ILE GLU ASN VAL LYS SEQRES 2 A 287 LYS VAL ALA HIS HIS ILE GLN LYS LEU THR SER ILE VAL SEQRES 3 A 287 PRO GLU ILE GLY ILE ILE CYS GLY SER GLY LEU GLY LYS SEQRES 4 A 287 LEU ALA ASP GLY VAL LYS ASP LYS ILE THR ILE PRO TYR SEQRES 5 A 287 THR LYS ILE PRO ASN PHE PRO GLN THR SER VAL VAL GLY SEQRES 6 A 287 HIS SER GLY ASN LEU ILE PHE GLY THR LEU SER GLY ARG SEQRES 7 A 287 LYS VAL VAL VAL MET GLN GLY ARG PHE HIS MET TYR GLU SEQRES 8 A 287 GLY TYR SER ASN ASP THR VAL ALA LEU PRO ILE ARG VAL SEQRES 9 A 287 MET LYS LEU LEU GLY VAL LYS ILE LEU MET VAL SER ASN SEQRES 10 A 287 ALA ALA GLY GLY LEU ASN ARG SER LEU LYS LEU GLY ASP SEQRES 11 A 287 PHE VAL ILE LEU LYS ASP HIS ILE TYR LEU PRO GLY LEU SEQRES 12 A 287 GLY LEU ASN ASN ILE LEU VAL GLY PRO ASN GLN GLU ALA SEQRES 13 A 287 PHE GLY THR ARG PHE PRO ALA LEU SER ASN ALA TYR ASP SEQRES 14 A 287 ARG ASP LEU ARG LYS LEU ALA VAL GLN VAL ALA GLU GLU SEQRES 15 A 287 ASN GLY PHE GLY ASN LEU VAL HIS GLN GLY VAL TYR VAL SEQRES 16 A 287 MET ASN GLY GLY PRO CYS TYR GLU THR PRO ALA GLU CYS SEQRES 17 A 287 THR MET LEU LEU ASN MET GLY CYS ASP VAL VAL GLY MET SEQRES 18 A 287 SER THR ILE PRO GLU VAL VAL ILE ALA ARG HIS CYS GLY SEQRES 19 A 287 ILE GLN VAL PHE ALA VAL SER LEU VAL THR ASN ILE SER SEQRES 20 A 287 VAL LEU ASP VAL GLU SER ASP LEU LYS PRO ASN HIS GLU SEQRES 21 A 287 GLU VAL LEU ALA THR GLY ALA GLN ARG ALA GLU LEU MET SEQRES 22 A 287 GLN SER TRP PHE GLU LYS ILE ILE GLU LYS LEU PRO LYS SEQRES 23 A 287 ASP SEQRES 1 B 287 MET HIS GLU SER VAL THR ALA ASN ILE GLU ASN VAL LYS SEQRES 2 B 287 LYS VAL ALA HIS HIS ILE GLN LYS LEU THR SER ILE VAL SEQRES 3 B 287 PRO GLU ILE GLY ILE ILE CYS GLY SER GLY LEU GLY LYS SEQRES 4 B 287 LEU ALA ASP GLY VAL LYS ASP LYS ILE THR ILE PRO TYR SEQRES 5 B 287 THR LYS ILE PRO ASN PHE PRO GLN THR SER VAL VAL GLY SEQRES 6 B 287 HIS SER GLY ASN LEU ILE PHE GLY THR LEU SER GLY ARG SEQRES 7 B 287 LYS VAL VAL VAL MET GLN GLY ARG PHE HIS MET TYR GLU SEQRES 8 B 287 GLY TYR SER ASN ASP THR VAL ALA LEU PRO ILE ARG VAL SEQRES 9 B 287 MET LYS LEU LEU GLY VAL LYS ILE LEU MET VAL SER ASN SEQRES 10 B 287 ALA ALA GLY GLY LEU ASN ARG SER LEU LYS LEU GLY ASP SEQRES 11 B 287 PHE VAL ILE LEU LYS ASP HIS ILE TYR LEU PRO GLY LEU SEQRES 12 B 287 GLY LEU ASN ASN ILE LEU VAL GLY PRO ASN GLN GLU ALA SEQRES 13 B 287 PHE GLY THR ARG PHE PRO ALA LEU SER ASN ALA TYR ASP SEQRES 14 B 287 ARG ASP LEU ARG LYS LEU ALA VAL GLN VAL ALA GLU GLU SEQRES 15 B 287 ASN GLY PHE GLY ASN LEU VAL HIS GLN GLY VAL TYR VAL SEQRES 16 B 287 MET ASN GLY GLY PRO CYS TYR GLU THR PRO ALA GLU CYS SEQRES 17 B 287 THR MET LEU LEU ASN MET GLY CYS ASP VAL VAL GLY MET SEQRES 18 B 287 SER THR ILE PRO GLU VAL VAL ILE ALA ARG HIS CYS GLY SEQRES 19 B 287 ILE GLN VAL PHE ALA VAL SER LEU VAL THR ASN ILE SER SEQRES 20 B 287 VAL LEU ASP VAL GLU SER ASP LEU LYS PRO ASN HIS GLU SEQRES 21 B 287 GLU VAL LEU ALA THR GLY ALA GLN ARG ALA GLU LEU MET SEQRES 22 B 287 GLN SER TRP PHE GLU LYS ILE ILE GLU LYS LEU PRO LYS SEQRES 23 B 287 ASP SEQRES 1 C 287 MET HIS GLU SER VAL THR ALA ASN ILE GLU ASN VAL LYS SEQRES 2 C 287 LYS VAL ALA HIS HIS ILE GLN LYS LEU THR SER ILE VAL SEQRES 3 C 287 PRO GLU ILE GLY ILE ILE CYS GLY SER GLY LEU GLY LYS SEQRES 4 C 287 LEU ALA ASP GLY VAL LYS ASP LYS ILE THR ILE PRO TYR SEQRES 5 C 287 THR LYS ILE PRO ASN PHE PRO GLN THR SER VAL VAL GLY SEQRES 6 C 287 HIS SER GLY ASN LEU ILE PHE GLY THR LEU SER GLY ARG SEQRES 7 C 287 LYS VAL VAL VAL MET GLN GLY ARG PHE HIS MET TYR GLU SEQRES 8 C 287 GLY TYR SER ASN ASP THR VAL ALA LEU PRO ILE ARG VAL SEQRES 9 C 287 MET LYS LEU LEU GLY VAL LYS ILE LEU MET VAL SER ASN SEQRES 10 C 287 ALA ALA GLY GLY LEU ASN ARG SER LEU LYS LEU GLY ASP SEQRES 11 C 287 PHE VAL ILE LEU LYS ASP HIS ILE TYR LEU PRO GLY LEU SEQRES 12 C 287 GLY LEU ASN ASN ILE LEU VAL GLY PRO ASN GLN GLU ALA SEQRES 13 C 287 PHE GLY THR ARG PHE PRO ALA LEU SER ASN ALA TYR ASP SEQRES 14 C 287 ARG ASP LEU ARG LYS LEU ALA VAL GLN VAL ALA GLU GLU SEQRES 15 C 287 ASN GLY PHE GLY ASN LEU VAL HIS GLN GLY VAL TYR VAL SEQRES 16 C 287 MET ASN GLY GLY PRO CYS TYR GLU THR PRO ALA GLU CYS SEQRES 17 C 287 THR MET LEU LEU ASN MET GLY CYS ASP VAL VAL GLY MET SEQRES 18 C 287 SER THR ILE PRO GLU VAL VAL ILE ALA ARG HIS CYS GLY SEQRES 19 C 287 ILE GLN VAL PHE ALA VAL SER LEU VAL THR ASN ILE SER SEQRES 20 C 287 VAL LEU ASP VAL GLU SER ASP LEU LYS PRO ASN HIS GLU SEQRES 21 C 287 GLU VAL LEU ALA THR GLY ALA GLN ARG ALA GLU LEU MET SEQRES 22 C 287 GLN SER TRP PHE GLU LYS ILE ILE GLU LYS LEU PRO LYS SEQRES 23 C 287 ASP HET SO4 A 291 5 HET ACT A 700 4 HET DMS A 703 4 HET SO4 A 704 5 HET ADE B 288 10 HET SO4 B 291 5 HET DMS B 703 4 HET SO4 C 291 5 HET ACT C 700 4 HET DMS C 703 4 HETNAM SO4 SULFATE ION HETNAM ACT ACETATE ION HETNAM DMS DIMETHYL SULFOXIDE HETNAM ADE ADENINE FORMUL 4 SO4 4(O4 S 2-) FORMUL 5 ACT 2(C2 H3 O2 1-) FORMUL 6 DMS 3(C2 H6 O S) FORMUL 8 ADE C5 H5 N5 FORMUL 14 HOH *768(H2 O) HELIX 1 1 ASN A 8 THR A 23 1 16 HELIX 2 2 LYS A 39 VAL A 44 1 6 HELIX 3 3 THR A 53 ILE A 55 5 3 HELIX 4 4 HIS A 88 GLY A 92 5 5 HELIX 5 5 SER A 94 GLY A 109 1 16 HELIX 6 6 TYR A 139 GLY A 144 1 6 HELIX 7 7 ASP A 169 ASN A 183 1 15 HELIX 8 8 PHE A 185 ASN A 187 5 3 HELIX 9 9 THR A 204 MET A 214 1 11 HELIX 10 10 THR A 223 CYS A 233 1 11 HELIX 11 11 ASN A 258 ARG A 269 1 12 HELIX 12 12 ARG A 269 LEU A 284 1 16 HELIX 13 13 ASN B 8 THR B 23 1 16 HELIX 14 14 THR B 53 ILE B 55 5 3 HELIX 15 15 HIS B 88 GLY B 92 5 5 HELIX 16 16 SER B 94 GLY B 109 1 16 HELIX 17 17 LEU B 140 GLY B 144 1 5 HELIX 18 18 ASP B 169 ASN B 183 1 15 HELIX 19 19 PHE B 185 ASN B 187 5 3 HELIX 20 20 THR B 204 MET B 214 1 11 HELIX 21 21 THR B 223 CYS B 233 1 11 HELIX 22 22 ALA B 267 LEU B 284 1 18 HELIX 23 23 ASN C 8 THR C 23 1 16 HELIX 24 24 LEU C 37 GLY C 43 1 7 HELIX 25 25 THR C 53 ILE C 55 5 3 HELIX 26 26 HIS C 88 GLY C 92 5 5 HELIX 27 27 SER C 94 GLY C 109 1 16 HELIX 28 28 TYR C 139 GLY C 144 1 6 HELIX 29 29 ASP C 169 ASN C 183 1 15 HELIX 30 30 PHE C 185 ASN C 187 5 3 HELIX 31 31 THR C 204 MET C 214 1 11 HELIX 32 32 THR C 223 CYS C 233 1 11 HELIX 33 33 ASN C 258 LYS C 283 1 26 SHEET 1 A10 LYS A 45 PRO A 51 0 SHEET 2 A10 ASN A 69 LEU A 75 -1 O LEU A 70 N ILE A 50 SHEET 3 A10 ARG A 78 GLN A 84 -1 O GLN A 84 N ASN A 69 SHEET 4 A10 ILE A 29 ILE A 32 1 N ILE A 31 O MET A 83 SHEET 5 A10 ILE A 112 GLY A 121 1 O ILE A 112 N GLY A 30 SHEET 6 A10 GLN A 236 ILE A 246 1 O GLN A 236 N LEU A 113 SHEET 7 A10 PHE A 131 ILE A 138 -1 N VAL A 132 O SER A 241 SHEET 8 A10 VAL A 189 MET A 196 1 O HIS A 190 N PHE A 131 SHEET 9 A10 VAL A 218 GLY A 220 1 O VAL A 218 N VAL A 195 SHEET 10 A10 ILE A 112 GLY A 121 -1 N GLY A 120 O VAL A 219 SHEET 1 B 2 SER A 62 VAL A 63 0 SHEET 2 B 2 HIS A 66 SER A 67 -1 O HIS A 66 N VAL A 63 SHEET 1 C10 LYS B 45 PRO B 51 0 SHEET 2 C10 ASN B 69 LEU B 75 -1 O LEU B 70 N ILE B 50 SHEET 3 C10 ARG B 78 GLN B 84 -1 O GLN B 84 N ASN B 69 SHEET 4 C10 ILE B 29 ILE B 32 1 N ILE B 31 O MET B 83 SHEET 5 C10 ILE B 112 GLY B 121 1 O MET B 114 N GLY B 30 SHEET 6 C10 GLN B 236 ILE B 246 1 O GLN B 236 N LEU B 113 SHEET 7 C10 PHE B 131 TYR B 139 -1 N VAL B 132 O SER B 241 SHEET 8 C10 VAL B 189 MET B 196 1 O HIS B 190 N ILE B 133 SHEET 9 C10 VAL B 218 GLY B 220 1 O VAL B 218 N VAL B 195 SHEET 10 C10 ILE B 112 GLY B 121 -1 N GLY B 120 O VAL B 219 SHEET 1 D10 LYS C 45 PRO C 51 0 SHEET 2 D10 ASN C 69 LEU C 75 -1 O LEU C 70 N ILE C 50 SHEET 3 D10 ARG C 78 GLN C 84 -1 O VAL C 80 N GLY C 73 SHEET 4 D10 ILE C 29 ILE C 32 1 N ILE C 31 O MET C 83 SHEET 5 D10 ILE C 112 GLY C 121 1 O MET C 114 N GLY C 30 SHEET 6 D10 GLN C 236 ILE C 246 1 O GLN C 236 N LEU C 113 SHEET 7 D10 PHE C 131 ILE C 138 -1 N VAL C 132 O SER C 241 SHEET 8 D10 VAL C 189 MET C 196 1 O HIS C 190 N ILE C 133 SHEET 9 D10 VAL C 218 GLY C 220 1 O VAL C 218 N VAL C 195 SHEET 10 D10 ILE C 112 GLY C 121 -1 N GLY C 120 O VAL C 219 SHEET 1 E 2 SER C 62 VAL C 63 0 SHEET 2 E 2 HIS C 66 SER C 67 -1 O HIS C 66 N VAL C 63 CISPEP 1 GLU A 3 SER A 4 0 -1.17 CISPEP 2 GLY A 199 PRO A 200 0 7.64 CISPEP 3 GLY B 199 PRO B 200 0 9.34 CISPEP 4 GLY C 199 PRO C 200 0 10.17 SITE 1 AC1 9 GLY A 34 SER A 35 ARG A 86 HIS A 88 SITE 2 AC1 9 ASN A 117 ALA A 118 SER A 222 HOH A 730 SITE 3 AC1 9 HOH A 739 SITE 1 AC2 9 GLY A 120 TYR A 202 GLU A 203 VAL A 219 SITE 2 AC2 9 GLY A 220 MET A 221 ASN A 245 HOH A 735 SITE 3 AC2 9 HOH A 807 SITE 1 AC3 6 ALA A 99 ARG A 103 ILE A 148 VAL A 150 SITE 2 AC3 6 GLN A 154 HOH A 795 SITE 1 AC4 6 LEU A 140 GLY A 144 HOH A 756 LEU B 140 SITE 2 AC4 6 GLY B 144 LEU C 140 SITE 1 AC5 11 ALA B 118 ALA B 119 GLY B 120 TYR B 202 SITE 2 AC5 11 GLU B 203 VAL B 219 GLY B 220 MET B 221 SITE 3 AC5 11 ASN B 245 HOH B 720 HOH B 805 SITE 1 AC6 12 GLY B 34 SER B 35 ARG B 86 HIS B 88 SITE 2 AC6 12 ASN B 117 ALA B 118 SER B 222 HOH B 717 SITE 3 AC6 12 HOH B 742 HOH B 758 HOH B 805 HOH B 839 SITE 1 AC7 7 ASN B 95 ALA B 99 ARG B 103 ILE B 148 SITE 2 AC7 7 VAL B 150 GLN B 154 HOH B 838 SITE 1 AC8 9 GLY C 34 SER C 35 ARG C 86 HIS C 88 SITE 2 AC8 9 ASN C 117 ALA C 118 SER C 222 HOH C 816 SITE 3 AC8 9 HOH C 904 SITE 1 AC9 8 GLY C 120 GLU C 203 VAL C 219 GLY C 220 SITE 2 AC9 8 MET C 221 ASN C 245 HOH C 743 HOH C 849 SITE 1 BC1 7 ASN C 95 ALA C 99 ARG C 103 ILE C 148 SITE 2 BC1 7 VAL C 150 GLN C 154 HOH C 811 CRYST1 48.989 119.995 130.982 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020413 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008334 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007635 0.00000