HEADER LYASE 14-JUL-08 3DT4 TITLE THE STRUCTURE OF RAT CYTOSOLIC PEPCK IN COMPLEX WITH OXALATE AND GTP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOENOLPYRUVATE CARBOXYKINASE, CYTOSOLIC [GTP]; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: PEPCK-C, PHOSPHOENOLPYRUVATE CARBOXYLASE; COMPND 5 EC: 4.1.1.32; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: BROWN RAT,RAT,RATS; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: PCK1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX4T2 KEYWDS KINASE, GLUCONEOGENESIS, LYASE, DECARBOXYLASE, GTP-BINDING, KEYWDS 2 NUCLEOTIDE-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR S.M.SULLIVAN,T.HOLYOAK REVDAT 6 21-FEB-24 3DT4 1 REMARK SEQADV LINK REVDAT 5 25-OCT-17 3DT4 1 REMARK REVDAT 4 13-JUL-11 3DT4 1 VERSN REVDAT 3 24-FEB-09 3DT4 1 VERSN REVDAT 2 07-OCT-08 3DT4 1 JRNL REVDAT 1 26-AUG-08 3DT4 0 JRNL AUTH S.M.SULLIVAN,T.HOLYOAK JRNL TITL ENZYMES WITH LID-GATED ACTIVE SITES MUST OPERATE BY AN JRNL TITL 2 INDUCED FIT MECHANISM INSTEAD OF CONFORMATIONAL SELECTION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 105 13829 2008 JRNL REFN ISSN 0027-8424 JRNL PMID 18772387 JRNL DOI 10.1073/PNAS.0805364105 REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.02 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 217074 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 10901 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 14744 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.14 REMARK 3 BIN R VALUE (WORKING SET) : 0.2960 REMARK 3 BIN FREE R VALUE SET COUNT : 721 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9731 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 92 REMARK 3 SOLVENT ATOMS : 1469 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.10000 REMARK 3 B22 (A**2) : -0.04000 REMARK 3 B33 (A**2) : 0.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.069 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.071 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.046 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.644 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.963 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 10303 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 14006 ; 1.601 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1300 ; 6.038 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 464 ;34.066 ;24.246 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1775 ;13.630 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 61 ;15.486 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1464 ; 0.111 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7921 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 6278 ; 0.915 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 10141 ; 1.538 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4025 ; 2.471 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3837 ; 3.918 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 53 REMARK 3 ORIGIN FOR THE GROUP (A): 41.1970 -17.9060 35.4880 REMARK 3 T TENSOR REMARK 3 T11: 0.0695 T22: 0.0411 REMARK 3 T33: 0.0581 T12: 0.0349 REMARK 3 T13: 0.0472 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 1.2222 L22: 1.6691 REMARK 3 L33: 0.9753 L12: -1.0219 REMARK 3 L13: -0.2295 L23: 0.3307 REMARK 3 S TENSOR REMARK 3 S11: 0.1471 S12: 0.0857 S13: 0.0821 REMARK 3 S21: -0.1543 S22: -0.0782 S23: -0.3069 REMARK 3 S31: 0.0443 S32: 0.0995 S33: -0.0690 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 54 A 101 REMARK 3 ORIGIN FOR THE GROUP (A): 21.1830 -14.4890 46.0620 REMARK 3 T TENSOR REMARK 3 T11: 0.0766 T22: 0.0528 REMARK 3 T33: 0.0325 T12: 0.0038 REMARK 3 T13: 0.0036 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.9993 L22: 0.3343 REMARK 3 L33: 0.6144 L12: -0.2456 REMARK 3 L13: 0.4358 L23: -0.0690 REMARK 3 S TENSOR REMARK 3 S11: 0.0867 S12: 0.0283 S13: -0.1804 REMARK 3 S21: 0.0298 S22: 0.0284 S23: 0.0387 REMARK 3 S31: 0.1595 S32: 0.0500 S33: -0.1150 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 102 A 209 REMARK 3 ORIGIN FOR THE GROUP (A): 31.7340 -7.8720 44.1740 REMARK 3 T TENSOR REMARK 3 T11: 0.0835 T22: 0.0870 REMARK 3 T33: 0.0397 T12: 0.0089 REMARK 3 T13: 0.0308 T23: 0.0078 REMARK 3 L TENSOR REMARK 3 L11: 0.6112 L22: 1.1140 REMARK 3 L33: 0.5561 L12: -0.4004 REMARK 3 L13: 0.0587 L23: 0.2969 REMARK 3 S TENSOR REMARK 3 S11: 0.0565 S12: 0.0252 S13: 0.0053 REMARK 3 S21: -0.0289 S22: -0.0225 S23: -0.1243 REMARK 3 S31: 0.0414 S32: 0.0489 S33: -0.0340 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 210 A 386 REMARK 3 ORIGIN FOR THE GROUP (A): 13.6460 -3.1640 39.7000 REMARK 3 T TENSOR REMARK 3 T11: 0.0911 T22: 0.0785 REMARK 3 T33: 0.0288 T12: -0.0031 REMARK 3 T13: 0.0114 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 0.4346 L22: 0.6813 REMARK 3 L33: 0.5314 L12: -0.2085 REMARK 3 L13: 0.1302 L23: -0.2038 REMARK 3 S TENSOR REMARK 3 S11: 0.0326 S12: 0.0487 S13: -0.0671 REMARK 3 S21: -0.0742 S22: 0.0030 S23: 0.0513 REMARK 3 S31: 0.0377 S32: -0.0087 S33: -0.0356 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 387 A 622 REMARK 3 ORIGIN FOR THE GROUP (A): 7.5140 11.3570 46.9050 REMARK 3 T TENSOR REMARK 3 T11: 0.0675 T22: 0.0803 REMARK 3 T33: 0.0206 T12: -0.0010 REMARK 3 T13: 0.0197 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 0.4560 L22: 0.6025 REMARK 3 L33: 0.4671 L12: -0.1649 REMARK 3 L13: 0.0606 L23: 0.0127 REMARK 3 S TENSOR REMARK 3 S11: 0.0009 S12: -0.0345 S13: 0.0114 REMARK 3 S21: -0.0023 S22: 0.0174 S23: 0.0441 REMARK 3 S31: -0.0268 S32: -0.0660 S33: -0.0184 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 3 C 67 REMARK 3 ORIGIN FOR THE GROUP (A): 32.2530 -15.3240 79.5300 REMARK 3 T TENSOR REMARK 3 T11: 0.0993 T22: 0.0666 REMARK 3 T33: 0.0539 T12: 0.0251 REMARK 3 T13: 0.0243 T23: -0.0213 REMARK 3 L TENSOR REMARK 3 L11: 1.1327 L22: 0.8990 REMARK 3 L33: 0.2506 L12: -0.8120 REMARK 3 L13: -0.0523 L23: -0.0485 REMARK 3 S TENSOR REMARK 3 S11: 0.0830 S12: 0.1570 S13: -0.1220 REMARK 3 S21: -0.1909 S22: -0.0840 S23: -0.0896 REMARK 3 S31: 0.0591 S32: 0.1043 S33: 0.0010 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 68 C 151 REMARK 3 ORIGIN FOR THE GROUP (A): 23.1220 -1.3610 92.4880 REMARK 3 T TENSOR REMARK 3 T11: 0.0704 T22: 0.0852 REMARK 3 T33: 0.0311 T12: 0.0002 REMARK 3 T13: 0.0134 T23: -0.0008 REMARK 3 L TENSOR REMARK 3 L11: 0.5041 L22: 0.7200 REMARK 3 L33: 0.3026 L12: -0.3391 REMARK 3 L13: 0.0969 L23: -0.1431 REMARK 3 S TENSOR REMARK 3 S11: -0.0027 S12: -0.0336 S13: -0.0128 REMARK 3 S21: 0.0220 S22: 0.0048 S23: -0.0486 REMARK 3 S31: 0.0444 S32: 0.0351 S33: -0.0021 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 152 C 209 REMARK 3 ORIGIN FOR THE GROUP (A): 24.9490 -7.6470 82.5340 REMARK 3 T TENSOR REMARK 3 T11: 0.1111 T22: 0.0935 REMARK 3 T33: 0.0543 T12: 0.0123 REMARK 3 T13: 0.0283 T23: -0.0104 REMARK 3 L TENSOR REMARK 3 L11: 0.9340 L22: 1.2686 REMARK 3 L33: 1.2286 L12: -0.3570 REMARK 3 L13: -0.0435 L23: 0.3567 REMARK 3 S TENSOR REMARK 3 S11: 0.0533 S12: 0.0536 S13: -0.0924 REMARK 3 S21: -0.0651 S22: -0.0458 S23: -0.0183 REMARK 3 S31: 0.0458 S32: 0.0850 S33: -0.0075 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 210 C 386 REMARK 3 ORIGIN FOR THE GROUP (A): 8.6710 1.2220 82.8800 REMARK 3 T TENSOR REMARK 3 T11: 0.0821 T22: 0.0701 REMARK 3 T33: 0.0305 T12: -0.0028 REMARK 3 T13: 0.0045 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 0.5864 L22: 0.5714 REMARK 3 L33: 0.5340 L12: -0.0933 REMARK 3 L13: 0.1357 L23: -0.1386 REMARK 3 S TENSOR REMARK 3 S11: 0.0213 S12: 0.0364 S13: -0.0773 REMARK 3 S21: -0.0691 S22: 0.0146 S23: 0.0609 REMARK 3 S31: 0.0301 S32: -0.0085 S33: -0.0360 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 387 C 622 REMARK 3 ORIGIN FOR THE GROUP (A): 2.0550 15.4640 90.0220 REMARK 3 T TENSOR REMARK 3 T11: 0.0677 T22: 0.0795 REMARK 3 T33: 0.0281 T12: 0.0092 REMARK 3 T13: 0.0118 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.5838 L22: 0.5623 REMARK 3 L33: 0.5544 L12: -0.0821 REMARK 3 L13: 0.1862 L23: -0.0491 REMARK 3 S TENSOR REMARK 3 S11: -0.0238 S12: -0.0641 S13: 0.0321 REMARK 3 S21: 0.0128 S22: 0.0214 S23: 0.0460 REMARK 3 S31: -0.0433 S32: -0.0868 S33: 0.0024 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3DT4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1000048454. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : SIDE SCATTERING BENT CUBE-ROOT I REMARK 200 -BEAM SINGLE CRYSTAL; ASYMMETRIC REMARK 200 CUT 4.965 DEGS REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 217132 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.71700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12-30% PEG 3350, 0.1M HEPES, 10 MM REMARK 280 MNCL2, PH 7.4, HANGING DROP VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 59.87950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 PRO A 3 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 PRO C 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 1515 O HOH C 1773 1.69 REMARK 500 O HOH C 1899 O HOH C 2090 1.77 REMARK 500 O HOH C 1602 O HOH C 2062 1.83 REMARK 500 O HOH C 1754 O HOH C 1853 1.92 REMARK 500 O HOH A 1369 O HOH A 1846 1.94 REMARK 500 O HOH A 1610 O HOH A 1844 1.96 REMARK 500 O HOH A 1429 O HOH A 1722 2.03 REMARK 500 OE2 GLU A 41 O HOH A 1830 2.06 REMARK 500 OE1 GLU A 607 O HOH A 1817 2.08 REMARK 500 O HOH C 1698 O HOH C 2036 2.09 REMARK 500 O HOH C 1772 O HOH C 2006 2.15 REMARK 500 O HOH C 1919 O HOH C 2029 2.16 REMARK 500 OE1 GLU C 41 O HOH C 2055 2.17 REMARK 500 OE2 GLU A 607 O HOH A 1817 2.17 REMARK 500 O HOH C 1856 O HOH C 2015 2.18 REMARK 500 ND2 ASN A 573 O HOH A 1847 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG C 83 O HOH A 1702 1556 1.94 REMARK 500 O HOH C 1817 O HOH C 1818 2647 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 518 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 LEU A 612 CA - CB - CG ANGL. DEV. = 16.5 DEGREES REMARK 500 ARG A 613 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 PRO C 148 C - N - CA ANGL. DEV. = 10.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 6 -104.67 -137.42 REMARK 500 LEU A 9 36.74 -98.41 REMARK 500 ARG A 129 -57.56 -125.64 REMARK 500 LYS A 243 -89.72 -87.10 REMARK 500 TRP A 260 -168.54 -125.86 REMARK 500 ASP A 311 -38.97 -145.76 REMARK 500 PHE A 333 78.46 -110.86 REMARK 500 ASN A 344 68.01 -151.62 REMARK 500 ALA A 468 -148.63 -144.16 REMARK 500 PHE A 480 17.96 57.70 REMARK 500 PHE A 530 -129.43 47.82 REMARK 500 ASP A 562 -0.87 71.93 REMARK 500 ASN A 601 -122.98 60.52 REMARK 500 HIS C 6 -106.37 -131.14 REMARK 500 ARG C 129 -57.63 -123.96 REMARK 500 SER C 151 137.47 5.11 REMARK 500 LEU C 218 118.18 -162.39 REMARK 500 LYS C 243 -91.76 -86.75 REMARK 500 TRP C 260 -164.79 -125.77 REMARK 500 ASP C 311 -38.77 -145.04 REMARK 500 PHE C 333 76.77 -110.30 REMARK 500 ASN C 344 68.55 -152.95 REMARK 500 THR C 465 -166.84 -126.04 REMARK 500 ALA C 468 -150.22 -144.44 REMARK 500 PHE C 480 17.64 59.60 REMARK 500 ALA C 505 18.01 58.60 REMARK 500 PHE C 530 -126.10 48.19 REMARK 500 ASN C 601 -114.48 38.96 REMARK 500 ASN C 601 -128.19 60.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 1PE A 1101 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1100 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 79 O REMARK 620 2 ASN A 208 O 107.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 800 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 291 OG1 REMARK 620 2 GTP A 900 O2B 85.2 REMARK 620 3 GTP A 900 O1G 170.5 95.8 REMARK 620 4 HOH A1142 O 90.2 87.2 80.4 REMARK 620 5 HOH A1153 O 83.8 168.1 95.8 97.1 REMARK 620 6 HOH A1157 O 99.7 85.7 89.8 167.3 92.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 700 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 311 OD1 REMARK 620 2 GTP A 900 O2G 94.0 REMARK 620 3 OXL A1000 O3 96.0 93.7 REMARK 620 4 OXL A1000 O4 173.1 86.9 77.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C1100 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU C 79 O REMARK 620 2 ASN C 208 O 105.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 800 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR C 291 OG1 REMARK 620 2 GTP C 900 O2B 83.9 REMARK 620 3 GTP C 900 O1G 171.6 96.7 REMARK 620 4 HOH C1525 O 99.2 86.2 89.2 REMARK 620 5 HOH C1527 O 85.6 168.0 94.5 89.6 REMARK 620 6 HOH C1555 O 89.8 87.7 81.9 168.6 98.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 700 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 311 OD1 REMARK 620 2 GTP C 900 O2G 93.6 REMARK 620 3 OXL C1000 O3 95.7 93.4 REMARK 620 4 OXL C1000 O4 171.8 87.4 76.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 800 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OXL A 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA C 1100 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 800 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OXL C 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1100 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTP A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTP C 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 1101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3DT2 RELATED DB: PDB REMARK 900 COMPLEX WITH OXALATE AND GTP REMARK 900 RELATED ID: 3DT7 RELATED DB: PDB REMARK 900 COMPLEX WITH SULFOPYRUVATE AND GTP REMARK 900 RELATED ID: 3DTB RELATED DB: PDB REMARK 900 COMPLEX WITH PHOSPHOGLYCOLATE AND GTP DBREF 3DT4 A 1 622 UNP P07379 PPCKC_RAT 1 622 DBREF 3DT4 C 1 622 UNP P07379 PPCKC_RAT 1 622 SEQADV 3DT4 GLY A -1 UNP P07379 EXPRESSION TAG SEQADV 3DT4 SER A 0 UNP P07379 EXPRESSION TAG SEQADV 3DT4 GLY C -1 UNP P07379 EXPRESSION TAG SEQADV 3DT4 SER C 0 UNP P07379 EXPRESSION TAG SEQRES 1 A 624 GLY SER MET PRO PRO GLN LEU HIS ASN GLY LEU ASP PHE SEQRES 2 A 624 SER ALA LYS VAL ILE GLN GLY SER LEU ASP SER LEU PRO SEQRES 3 A 624 GLN GLU VAL ARG LYS PHE VAL GLU GLY ASN ALA GLN LEU SEQRES 4 A 624 CYS GLN PRO GLU TYR ILE HIS ILE CYS ASP GLY SER GLU SEQRES 5 A 624 GLU GLU TYR GLY ARG LEU LEU ALA HIS MET GLN GLU GLU SEQRES 6 A 624 GLY VAL ILE ARG LYS LEU LYS LYS TYR ASP ASN CYS TRP SEQRES 7 A 624 LEU ALA LEU THR ASP PRO ARG ASP VAL ALA ARG ILE GLU SEQRES 8 A 624 SER LYS THR VAL ILE ILE THR GLN GLU GLN ARG ASP THR SEQRES 9 A 624 VAL PRO ILE PRO LYS SER GLY GLN SER GLN LEU GLY ARG SEQRES 10 A 624 TRP MET SER GLU GLU ASP PHE GLU LYS ALA PHE ASN ALA SEQRES 11 A 624 ARG PHE PRO GLY CYS MET LYS GLY ARG THR MET TYR VAL SEQRES 12 A 624 ILE PRO PHE SER MET GLY PRO LEU GLY SER PRO LEU ALA SEQRES 13 A 624 LYS ILE GLY ILE GLU LEU THR ASP SER PRO TYR VAL VAL SEQRES 14 A 624 ALA SER MET ARG ILE MET THR ARG MET GLY THR SER VAL SEQRES 15 A 624 LEU GLU ALA LEU GLY ASP GLY GLU PHE ILE LYS CYS LEU SEQRES 16 A 624 HIS SER VAL GLY CYS PRO LEU PRO LEU LYS LYS PRO LEU SEQRES 17 A 624 VAL ASN ASN TRP ALA CYS ASN PRO GLU LEU THR LEU ILE SEQRES 18 A 624 ALA HIS LEU PRO ASP ARG ARG GLU ILE ILE SER PHE GLY SEQRES 19 A 624 SER GLY TYR GLY GLY ASN SER LEU LEU GLY LYS LYS CYS SEQRES 20 A 624 PHE ALA LEU ARG ILE ALA SER ARG LEU ALA LYS GLU GLU SEQRES 21 A 624 GLY TRP LEU ALA GLU HIS MET LEU ILE LEU GLY ILE THR SEQRES 22 A 624 ASN PRO GLU GLY LYS LYS LYS TYR LEU ALA ALA ALA PHE SEQRES 23 A 624 PRO SER ALA CYS GLY LYS THR ASN LEU ALA MET MET ASN SEQRES 24 A 624 PRO THR LEU PRO GLY TRP LYS VAL GLU CYS VAL GLY ASP SEQRES 25 A 624 ASP ILE ALA TRP MET LYS PHE ASP ALA GLN GLY ASN LEU SEQRES 26 A 624 ARG ALA ILE ASN PRO GLU ASN GLY PHE PHE GLY VAL ALA SEQRES 27 A 624 PRO GLY THR SER VAL LYS THR ASN PRO ASN ALA ILE LYS SEQRES 28 A 624 THR ILE GLN LYS ASN THR ILE PHE THR ASN VAL ALA GLU SEQRES 29 A 624 THR SER ASP GLY GLY VAL TYR TRP GLU GLY ILE ASP GLU SEQRES 30 A 624 PRO LEU ALA PRO GLY VAL THR ILE THR SER TRP LYS ASN SEQRES 31 A 624 LYS GLU TRP ARG PRO GLN ASP GLU GLU PRO CYS ALA HIS SEQRES 32 A 624 PRO ASN SER ARG PHE CYS THR PRO ALA SER GLN CYS PRO SEQRES 33 A 624 ILE ILE ASP PRO ALA TRP GLU SER PRO GLU GLY VAL PRO SEQRES 34 A 624 ILE GLU GLY ILE ILE PHE GLY GLY ARG ARG PRO ALA GLY SEQRES 35 A 624 VAL PRO LEU VAL TYR GLU ALA LEU SER TRP GLN HIS GLY SEQRES 36 A 624 VAL PHE VAL GLY ALA ALA MET ARG SER GLU ALA THR ALA SEQRES 37 A 624 ALA ALA GLU HIS LYS GLY LYS VAL ILE MET HIS ASP PRO SEQRES 38 A 624 PHE ALA MET ARG PRO PHE PHE GLY TYR ASN PHE GLY LYS SEQRES 39 A 624 TYR LEU ALA HIS TRP LEU SER MET ALA HIS ARG PRO ALA SEQRES 40 A 624 ALA LYS LEU PRO LYS ILE PHE HIS VAL ASN TRP PHE ARG SEQRES 41 A 624 LYS ASP LYS ASN GLY LYS PHE LEU TRP PRO GLY PHE GLY SEQRES 42 A 624 GLU ASN SER ARG VAL LEU GLU TRP MET PHE GLY ARG ILE SEQRES 43 A 624 GLU GLY GLU ASP SER ALA LYS LEU THR PRO ILE GLY TYR SEQRES 44 A 624 VAL PRO LYS GLU ASP ALA LEU ASN LEU LYS GLY LEU GLY SEQRES 45 A 624 ASP VAL ASN VAL GLU GLU LEU PHE GLY ILE SER LYS GLU SEQRES 46 A 624 PHE TRP GLU LYS GLU VAL GLU GLU ILE ASP LYS TYR LEU SEQRES 47 A 624 GLU ASP GLN VAL ASN ALA ASP LEU PRO TYR GLU ILE GLU SEQRES 48 A 624 ARG GLU LEU ARG ALA LEU LYS GLN ARG ILE SER GLN MET SEQRES 1 C 624 GLY SER MET PRO PRO GLN LEU HIS ASN GLY LEU ASP PHE SEQRES 2 C 624 SER ALA LYS VAL ILE GLN GLY SER LEU ASP SER LEU PRO SEQRES 3 C 624 GLN GLU VAL ARG LYS PHE VAL GLU GLY ASN ALA GLN LEU SEQRES 4 C 624 CYS GLN PRO GLU TYR ILE HIS ILE CYS ASP GLY SER GLU SEQRES 5 C 624 GLU GLU TYR GLY ARG LEU LEU ALA HIS MET GLN GLU GLU SEQRES 6 C 624 GLY VAL ILE ARG LYS LEU LYS LYS TYR ASP ASN CYS TRP SEQRES 7 C 624 LEU ALA LEU THR ASP PRO ARG ASP VAL ALA ARG ILE GLU SEQRES 8 C 624 SER LYS THR VAL ILE ILE THR GLN GLU GLN ARG ASP THR SEQRES 9 C 624 VAL PRO ILE PRO LYS SER GLY GLN SER GLN LEU GLY ARG SEQRES 10 C 624 TRP MET SER GLU GLU ASP PHE GLU LYS ALA PHE ASN ALA SEQRES 11 C 624 ARG PHE PRO GLY CYS MET LYS GLY ARG THR MET TYR VAL SEQRES 12 C 624 ILE PRO PHE SER MET GLY PRO LEU GLY SER PRO LEU ALA SEQRES 13 C 624 LYS ILE GLY ILE GLU LEU THR ASP SER PRO TYR VAL VAL SEQRES 14 C 624 ALA SER MET ARG ILE MET THR ARG MET GLY THR SER VAL SEQRES 15 C 624 LEU GLU ALA LEU GLY ASP GLY GLU PHE ILE LYS CYS LEU SEQRES 16 C 624 HIS SER VAL GLY CYS PRO LEU PRO LEU LYS LYS PRO LEU SEQRES 17 C 624 VAL ASN ASN TRP ALA CYS ASN PRO GLU LEU THR LEU ILE SEQRES 18 C 624 ALA HIS LEU PRO ASP ARG ARG GLU ILE ILE SER PHE GLY SEQRES 19 C 624 SER GLY TYR GLY GLY ASN SER LEU LEU GLY LYS LYS CYS SEQRES 20 C 624 PHE ALA LEU ARG ILE ALA SER ARG LEU ALA LYS GLU GLU SEQRES 21 C 624 GLY TRP LEU ALA GLU HIS MET LEU ILE LEU GLY ILE THR SEQRES 22 C 624 ASN PRO GLU GLY LYS LYS LYS TYR LEU ALA ALA ALA PHE SEQRES 23 C 624 PRO SER ALA CYS GLY LYS THR ASN LEU ALA MET MET ASN SEQRES 24 C 624 PRO THR LEU PRO GLY TRP LYS VAL GLU CYS VAL GLY ASP SEQRES 25 C 624 ASP ILE ALA TRP MET LYS PHE ASP ALA GLN GLY ASN LEU SEQRES 26 C 624 ARG ALA ILE ASN PRO GLU ASN GLY PHE PHE GLY VAL ALA SEQRES 27 C 624 PRO GLY THR SER VAL LYS THR ASN PRO ASN ALA ILE LYS SEQRES 28 C 624 THR ILE GLN LYS ASN THR ILE PHE THR ASN VAL ALA GLU SEQRES 29 C 624 THR SER ASP GLY GLY VAL TYR TRP GLU GLY ILE ASP GLU SEQRES 30 C 624 PRO LEU ALA PRO GLY VAL THR ILE THR SER TRP LYS ASN SEQRES 31 C 624 LYS GLU TRP ARG PRO GLN ASP GLU GLU PRO CYS ALA HIS SEQRES 32 C 624 PRO ASN SER ARG PHE CYS THR PRO ALA SER GLN CYS PRO SEQRES 33 C 624 ILE ILE ASP PRO ALA TRP GLU SER PRO GLU GLY VAL PRO SEQRES 34 C 624 ILE GLU GLY ILE ILE PHE GLY GLY ARG ARG PRO ALA GLY SEQRES 35 C 624 VAL PRO LEU VAL TYR GLU ALA LEU SER TRP GLN HIS GLY SEQRES 36 C 624 VAL PHE VAL GLY ALA ALA MET ARG SER GLU ALA THR ALA SEQRES 37 C 624 ALA ALA GLU HIS LYS GLY LYS VAL ILE MET HIS ASP PRO SEQRES 38 C 624 PHE ALA MET ARG PRO PHE PHE GLY TYR ASN PHE GLY LYS SEQRES 39 C 624 TYR LEU ALA HIS TRP LEU SER MET ALA HIS ARG PRO ALA SEQRES 40 C 624 ALA LYS LEU PRO LYS ILE PHE HIS VAL ASN TRP PHE ARG SEQRES 41 C 624 LYS ASP LYS ASN GLY LYS PHE LEU TRP PRO GLY PHE GLY SEQRES 42 C 624 GLU ASN SER ARG VAL LEU GLU TRP MET PHE GLY ARG ILE SEQRES 43 C 624 GLU GLY GLU ASP SER ALA LYS LEU THR PRO ILE GLY TYR SEQRES 44 C 624 VAL PRO LYS GLU ASP ALA LEU ASN LEU LYS GLY LEU GLY SEQRES 45 C 624 ASP VAL ASN VAL GLU GLU LEU PHE GLY ILE SER LYS GLU SEQRES 46 C 624 PHE TRP GLU LYS GLU VAL GLU GLU ILE ASP LYS TYR LEU SEQRES 47 C 624 GLU ASP GLN VAL ASN ALA ASP LEU PRO TYR GLU ILE GLU SEQRES 48 C 624 ARG GLU LEU ARG ALA LEU LYS GLN ARG ILE SER GLN MET HET MN A 700 1 HET MN A 800 1 HET OXL A1000 6 HET NA A1100 1 HET GTP A 900 32 HET 1PE A1101 10 HET NA C1100 1 HET MN C 700 1 HET MN C 800 1 HET OXL C1000 6 HET GTP C 900 32 HETNAM MN MANGANESE (II) ION HETNAM OXL OXALATE ION HETNAM NA SODIUM ION HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN 1PE PEG400 FORMUL 3 MN 4(MN 2+) FORMUL 5 OXL 2(C2 O4 2-) FORMUL 6 NA 2(NA 1+) FORMUL 7 GTP 2(C10 H16 N5 O14 P3) FORMUL 8 1PE C10 H22 O6 FORMUL 14 HOH *1469(H2 O) HELIX 1 1 PHE A 11 ALA A 13 5 3 HELIX 2 2 SER A 19 LEU A 23 5 5 HELIX 3 3 PRO A 24 GLN A 39 1 16 HELIX 4 4 SER A 49 GLU A 63 1 15 HELIX 5 5 ILE A 88 SER A 90 5 3 HELIX 6 6 GLU A 98 VAL A 103 1 6 HELIX 7 7 SER A 118 ALA A 128 1 11 HELIX 8 8 SER A 163 THR A 174 1 12 HELIX 9 9 GLY A 177 GLY A 185 1 9 HELIX 10 10 ASN A 213 THR A 217 5 5 HELIX 11 11 PRO A 223 ARG A 225 5 3 HELIX 12 12 TYR A 235 LEU A 240 1 6 HELIX 13 13 LYS A 243 LEU A 248 1 6 HELIX 14 14 LEU A 248 GLY A 259 1 12 HELIX 15 15 GLY A 289 MET A 295 1 7 HELIX 16 16 ASN A 344 ILE A 351 1 8 HELIX 17 17 SER A 411 CYS A 413 5 3 HELIX 18 18 SER A 449 ALA A 459 1 11 HELIX 19 19 PRO A 479 MET A 482 5 4 HELIX 20 20 ASN A 489 MET A 500 1 12 HELIX 21 21 ALA A 501 ARG A 503 5 3 HELIX 22 22 GLY A 529 GLU A 532 5 4 HELIX 23 23 ASN A 533 GLU A 545 1 13 HELIX 24 24 ASN A 573 GLY A 579 1 7 HELIX 25 25 SER A 581 VAL A 600 1 20 HELIX 26 26 ASN A 601 LEU A 604 5 4 HELIX 27 27 PRO A 605 GLN A 621 1 17 HELIX 28 28 PHE C 11 ALA C 13 5 3 HELIX 29 29 SER C 19 LEU C 23 5 5 HELIX 30 30 PRO C 24 GLN C 39 1 16 HELIX 31 31 SER C 49 GLU C 63 1 15 HELIX 32 32 ILE C 88 SER C 90 5 3 HELIX 33 33 GLU C 98 VAL C 103 1 6 HELIX 34 34 SER C 118 ALA C 128 1 11 HELIX 35 35 SER C 163 THR C 174 1 12 HELIX 36 36 GLY C 177 GLY C 185 1 9 HELIX 37 37 PRO C 223 ARG C 225 5 3 HELIX 38 38 TYR C 235 LEU C 240 1 6 HELIX 39 39 LYS C 243 LEU C 248 1 6 HELIX 40 40 LEU C 248 GLY C 259 1 12 HELIX 41 41 GLY C 289 MET C 295 1 7 HELIX 42 42 ASN C 344 ILE C 351 1 8 HELIX 43 43 SER C 411 CYS C 413 5 3 HELIX 44 44 ASP C 417 SER C 422 5 6 HELIX 45 45 SER C 449 ALA C 459 1 11 HELIX 46 46 PRO C 479 MET C 482 5 4 HELIX 47 47 ASN C 489 MET C 500 1 12 HELIX 48 48 ALA C 501 ARG C 503 5 3 HELIX 49 49 GLY C 529 GLU C 532 5 4 HELIX 50 50 ASN C 533 GLU C 545 1 13 HELIX 51 51 ASN C 573 GLY C 579 1 7 HELIX 52 52 SER C 581 VAL C 600 1 20 HELIX 53 53 ASN C 601 LEU C 604 5 4 HELIX 54 54 PRO C 605 GLN C 621 1 17 SHEET 1 A 9 VAL A 15 GLN A 17 0 SHEET 2 A 9 TYR A 42 ILE A 45 1 O ILE A 43 N ILE A 16 SHEET 3 A 9 THR A 138 MET A 146 1 O MET A 139 N TYR A 42 SHEET 4 A 9 LYS A 155 THR A 161 -1 O THR A 161 N TYR A 140 SHEET 5 A 9 ILE A 190 SER A 195 1 O CYS A 192 N LEU A 160 SHEET 6 A 9 GLU A 227 PHE A 231 1 O SER A 230 N LEU A 193 SHEET 7 A 9 LEU A 218 LEU A 222 -1 N LEU A 222 O GLU A 227 SHEET 8 A 9 THR A 92 ILE A 95 1 N ILE A 95 O HIS A 221 SHEET 9 A 9 TRP A 116 MET A 117 1 O MET A 117 N ILE A 94 SHEET 1 B 4 VAL A 15 GLN A 17 0 SHEET 2 B 4 TYR A 42 ILE A 45 1 O ILE A 43 N ILE A 16 SHEET 3 B 4 THR A 138 MET A 146 1 O MET A 139 N TYR A 42 SHEET 4 B 4 ARG A 175 MET A 176 -1 O ARG A 175 N SER A 145 SHEET 1 C 5 ARG A 67 LYS A 68 0 SHEET 2 C 5 TRP A 76 ALA A 78 -1 O LEU A 77 N ARG A 67 SHEET 3 C 5 ILE A 356 THR A 358 1 O PHE A 357 N TRP A 76 SHEET 4 C 5 ARG A 405 PRO A 409 -1 O ARG A 405 N THR A 358 SHEET 5 C 5 GLY A 331 VAL A 335 -1 N PHE A 332 O THR A 408 SHEET 1 D 7 LEU A 261 GLU A 263 0 SHEET 2 D 7 ALA A 313 PHE A 317 -1 O ALA A 313 N GLU A 263 SHEET 3 D 7 LEU A 323 ILE A 326 -1 O ARG A 324 N LYS A 316 SHEET 4 D 7 VAL A 426 GLY A 434 -1 O ILE A 428 N LEU A 323 SHEET 5 D 7 LYS A 277 ALA A 283 1 N TYR A 279 O GLU A 429 SHEET 6 D 7 LEU A 266 THR A 271 -1 N ILE A 270 O LYS A 278 SHEET 7 D 7 LYS A 304 GLY A 309 -1 O GLU A 306 N GLY A 269 SHEET 1 E 6 LEU A 261 GLU A 263 0 SHEET 2 E 6 ALA A 313 PHE A 317 -1 O ALA A 313 N GLU A 263 SHEET 3 E 6 LEU A 323 ILE A 326 -1 O ARG A 324 N LYS A 316 SHEET 4 E 6 VAL A 426 GLY A 434 -1 O ILE A 428 N LEU A 323 SHEET 5 E 6 LYS A 510 VAL A 514 1 O PHE A 512 N PHE A 433 SHEET 6 E 6 VAL A 444 GLU A 446 -1 N TYR A 445 O HIS A 513 SHEET 1 F 4 VAL A 368 TYR A 369 0 SHEET 2 F 4 ALA A 361 THR A 363 -1 N ALA A 361 O TYR A 369 SHEET 3 F 4 ILE A 383 THR A 384 -1 O THR A 384 N GLU A 362 SHEET 4 F 4 GLU A 390 TRP A 391 -1 O TRP A 391 N ILE A 383 SHEET 1 G 2 ARG A 461 GLU A 463 0 SHEET 2 G 2 ILE A 475 HIS A 477 -1 O MET A 476 N SER A 462 SHEET 1 H 2 ALA A 550 THR A 553 0 SHEET 2 H 2 GLY A 556 PRO A 559 -1 O VAL A 558 N LYS A 551 SHEET 1 I 9 VAL C 15 GLN C 17 0 SHEET 2 I 9 TYR C 42 ILE C 45 1 O ILE C 43 N ILE C 16 SHEET 3 I 9 THR C 138 MET C 146 1 O MET C 139 N TYR C 42 SHEET 4 I 9 LYS C 155 THR C 161 -1 O THR C 161 N TYR C 140 SHEET 5 I 9 ILE C 190 SER C 195 1 O CYS C 192 N LEU C 160 SHEET 6 I 9 GLU C 227 PHE C 231 1 O SER C 230 N LEU C 193 SHEET 7 I 9 LEU C 218 LEU C 222 -1 N LEU C 222 O GLU C 227 SHEET 8 I 9 THR C 92 ILE C 95 1 N ILE C 95 O HIS C 221 SHEET 9 I 9 TRP C 116 MET C 117 1 O MET C 117 N ILE C 94 SHEET 1 J 4 VAL C 15 GLN C 17 0 SHEET 2 J 4 TYR C 42 ILE C 45 1 O ILE C 43 N ILE C 16 SHEET 3 J 4 THR C 138 MET C 146 1 O MET C 139 N TYR C 42 SHEET 4 J 4 ARG C 175 MET C 176 -1 O ARG C 175 N SER C 145 SHEET 1 K 5 ARG C 67 LYS C 68 0 SHEET 2 K 5 TRP C 76 ALA C 78 -1 O LEU C 77 N ARG C 67 SHEET 3 K 5 ILE C 356 THR C 358 1 O PHE C 357 N TRP C 76 SHEET 4 K 5 ARG C 405 PRO C 409 -1 O ARG C 405 N THR C 358 SHEET 5 K 5 GLY C 331 VAL C 335 -1 N GLY C 334 O PHE C 406 SHEET 1 L 7 LEU C 261 GLU C 263 0 SHEET 2 L 7 ALA C 313 PHE C 317 -1 O MET C 315 N LEU C 261 SHEET 3 L 7 LEU C 323 ILE C 326 -1 O ILE C 326 N TRP C 314 SHEET 4 L 7 VAL C 426 GLY C 434 -1 O ILE C 428 N LEU C 323 SHEET 5 L 7 LYS C 277 ALA C 283 1 N TYR C 279 O GLU C 429 SHEET 6 L 7 LEU C 266 THR C 271 -1 N ILE C 270 O LYS C 278 SHEET 7 L 7 LYS C 304 GLY C 309 -1 O GLU C 306 N GLY C 269 SHEET 1 M 6 LEU C 261 GLU C 263 0 SHEET 2 M 6 ALA C 313 PHE C 317 -1 O MET C 315 N LEU C 261 SHEET 3 M 6 LEU C 323 ILE C 326 -1 O ILE C 326 N TRP C 314 SHEET 4 M 6 VAL C 426 GLY C 434 -1 O ILE C 428 N LEU C 323 SHEET 5 M 6 LYS C 510 VAL C 514 1 O PHE C 512 N PHE C 433 SHEET 6 M 6 VAL C 444 GLU C 446 -1 N TYR C 445 O HIS C 513 SHEET 1 N 4 VAL C 368 TYR C 369 0 SHEET 2 N 4 ALA C 361 THR C 363 -1 N ALA C 361 O TYR C 369 SHEET 3 N 4 ILE C 383 THR C 384 -1 O THR C 384 N GLU C 362 SHEET 4 N 4 GLU C 390 TRP C 391 -1 O TRP C 391 N ILE C 383 SHEET 1 O 2 ARG C 461 GLU C 463 0 SHEET 2 O 2 ILE C 475 HIS C 477 -1 O MET C 476 N SER C 462 SHEET 1 P 2 ALA C 550 THR C 553 0 SHEET 2 P 2 GLY C 556 PRO C 559 -1 O VAL C 558 N LYS C 551 LINK O LEU A 79 NA NA A1100 1555 1555 2.27 LINK O ASN A 208 NA NA A1100 1555 1555 2.24 LINK OG1 THR A 291 MN MN A 800 1555 1555 2.28 LINK OD1 ASP A 311 MN MN A 700 1555 1555 2.12 LINK MN MN A 700 O2G GTP A 900 1555 1555 2.25 LINK MN MN A 700 O3 OXL A1000 1555 1555 2.11 LINK MN MN A 700 O4 OXL A1000 1555 1555 2.12 LINK MN MN A 800 O2B GTP A 900 1555 1555 2.20 LINK MN MN A 800 O1G GTP A 900 1555 1555 2.15 LINK MN MN A 800 O HOH A1142 1555 1555 2.28 LINK MN MN A 800 O HOH A1153 1555 1555 2.16 LINK MN MN A 800 O HOH A1157 1555 1555 2.16 LINK O LEU C 79 NA NA C1100 1555 1555 2.35 LINK O ASN C 208 NA NA C1100 1555 1555 2.29 LINK OG1 THR C 291 MN MN C 800 1555 1555 2.29 LINK OD1 ASP C 311 MN MN C 700 1555 1555 2.12 LINK MN MN C 700 O2G GTP C 900 1555 1555 2.22 LINK MN MN C 700 O3 OXL C1000 1555 1555 2.12 LINK MN MN C 700 O4 OXL C1000 1555 1555 2.14 LINK MN MN C 800 O2B GTP C 900 1555 1555 2.17 LINK MN MN C 800 O1G GTP C 900 1555 1555 2.18 LINK MN MN C 800 O HOH C1525 1555 1555 2.15 LINK MN MN C 800 O HOH C1527 1555 1555 2.20 LINK MN MN C 800 O HOH C1555 1555 1555 2.29 CISPEP 1 LEU A 200 PRO A 201 0 0.05 CISPEP 2 LEU C 149 GLY C 150 0 -7.38 CISPEP 3 LEU C 200 PRO C 201 0 1.98 SITE 1 AC1 3 LYS A 244 HIS A 264 ASP A 311 SITE 1 AC2 2 THR A 291 ASP A 310 SITE 1 AC3 6 ARG A 87 LYS A 244 HIS A 264 SER A 286 SITE 2 AC3 6 ASP A 311 ARG A 405 SITE 1 AC4 2 LEU C 79 ASN C 208 SITE 1 AC5 3 LYS C 244 HIS C 264 ASP C 311 SITE 1 AC6 2 THR C 291 ASP C 310 SITE 1 AC7 6 ARG C 87 LYS C 244 HIS C 264 SER C 286 SITE 2 AC7 6 ASP C 311 ARG C 405 SITE 1 AC8 2 LEU A 79 ASN A 208 SITE 1 AC9 19 HIS A 264 PRO A 285 SER A 286 ALA A 287 SITE 2 AC9 19 CYS A 288 GLY A 289 LYS A 290 THR A 291 SITE 3 AC9 19 ASN A 292 ASP A 311 PRO A 337 ARG A 405 SITE 4 AC9 19 ARG A 436 TRP A 516 PHE A 517 PHE A 525 SITE 5 AC9 19 GLY A 529 PHE A 530 ASN A 533 SITE 1 BC1 19 HIS C 264 PRO C 285 SER C 286 ALA C 287 SITE 2 BC1 19 CYS C 288 GLY C 289 LYS C 290 THR C 291 SITE 3 BC1 19 ASN C 292 ASP C 311 PRO C 337 ARG C 405 SITE 4 BC1 19 ARG C 436 TRP C 516 PHE C 517 PHE C 525 SITE 5 BC1 19 GLY C 529 PHE C 530 ASN C 533 SITE 1 BC2 5 LEU A 153 TRP A 314 LYS A 316 ARG A 324 SITE 2 BC2 5 GLU A 424 CRYST1 60.454 119.759 87.300 90.00 96.70 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016542 0.000000 0.001943 0.00000 SCALE2 0.000000 0.008350 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011533 0.00000