HEADER HYDROLASE 06-MAY-10 3AI0 TITLE CRYSTAL STRUCTURE OF BETA-GLUCOSIDASE FROM TERMITE NEOTERMES TITLE 2 KOSHUNENSIS IN COMPLEX WITH PARA-NITROPHENYL-BETA-D-GLUCOPYRANOSIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-GLUCOSIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.21; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEOTERMES KOSHUNENSIS; SOURCE 3 ORGANISM_TAXID: 60586; SOURCE 4 GENE: NKBG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL-21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-21A KEYWDS CELLULASES, GLYCOSYL HYDROLASE, MANGANESE ENHANCEMENT, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR W.-Y.JENG,C.-I.LIU,A.H.-J.WANG REVDAT 3 29-JUL-20 3AI0 1 REMARK SEQADV SITE REVDAT 2 22-DEC-10 3AI0 1 JRNL REVDAT 1 18-AUG-10 3AI0 0 JRNL AUTH W.-Y.JENG,N.-C.WANG,M.-H.LIN,C.-T.LIN,Y.-C.LIAW,W.-J.CHANG, JRNL AUTH 2 C.-I.LIU,P.-H.LIANG,A.H.-J.WANG JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSIS OF THREE JRNL TITL 2 BETA-GLUCOSIDASES FROM BACTERIUM CLOSTRIDIUM CELLULOVORANS, JRNL TITL 3 FUNGUS TRICHODERMA REESEI AND TERMITE NEOTERMES KOSHUNENSIS JRNL REF J.STRUCT.BIOL. V. 173 46 2011 JRNL REFN ISSN 1047-8477 JRNL PMID 20682343 JRNL DOI 10.1016/J.JSB.2010.07.008 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 84715 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.123 REMARK 3 R VALUE (WORKING SET) : 0.122 REMARK 3 FREE R VALUE : 0.153 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4491 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.47 REMARK 3 REFLECTION IN BIN (WORKING SET) : 10986 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.1760 REMARK 3 BIN FREE R VALUE SET COUNT : 575 REMARK 3 BIN FREE R VALUE : 0.2220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3810 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 781 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.04000 REMARK 3 B22 (A**2) : -0.32000 REMARK 3 B33 (A**2) : 1.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.30000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.058 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.052 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.029 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.590 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.979 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.972 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3949 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5377 ; 1.431 ; 1.940 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 471 ; 5.485 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 208 ;31.826 ;24.279 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 604 ;10.290 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;12.564 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 554 ; 0.111 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3127 ; 0.014 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2344 ; 1.507 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3770 ; 2.179 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1605 ; 3.119 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1607 ; 4.402 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3949 ; 1.705 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 784 ; 7.032 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3837 ; 3.766 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 27 A 498 REMARK 3 ORIGIN FOR THE GROUP (A): -29.3728 87.6687 15.9024 REMARK 3 T TENSOR REMARK 3 T11: 0.0140 T22: 0.0101 REMARK 3 T33: 0.0071 T12: 0.0037 REMARK 3 T13: -0.0013 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.3153 L22: 0.1053 REMARK 3 L33: 0.1480 L12: -0.0320 REMARK 3 L13: 0.0581 L23: -0.0630 REMARK 3 S TENSOR REMARK 3 S11: -0.0180 S12: -0.0516 S13: -0.0163 REMARK 3 S21: 0.0104 S22: 0.0127 S23: -0.0178 REMARK 3 S31: -0.0178 S32: -0.0034 S33: 0.0053 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3AI0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1000029278. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13C1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97315 REMARK 200 MONOCHROMATOR : HORIZONTALLY FOCUSING SINGLE REMARK 200 CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : VERTICALLY FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 93220 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.42800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 3AHZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS, 18-21%(W/V) PEG 3350, REMARK 280 0.1-0.25M MGCL2, PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 46.54450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.37750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 46.54450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.37750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1116 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1681 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 20 REMARK 465 ASP A 21 REMARK 465 VAL A 22 REMARK 465 ALA A 23 REMARK 465 SER A 24 REMARK 465 SER A 25 REMARK 465 ASP A 26 REMARK 465 LEU A 499 REMARK 465 GLU A 500 REMARK 465 HIS A 501 REMARK 465 HIS A 502 REMARK 465 HIS A 503 REMARK 465 HIS A 504 REMARK 465 HIS A 505 REMARK 465 HIS A 506 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1484 O HOH A 1610 1.98 REMARK 500 O HOH A 1711 O HOH A 1774 1.99 REMARK 500 O HOH A 1409 O HOH A 1453 2.04 REMARK 500 OE2 GLU A 271 O HOH A 1331 2.06 REMARK 500 O HOH A 1709 O HOH A 1778 2.08 REMARK 500 O HOH A 1442 O HOH A 1603 2.08 REMARK 500 OE1 GLN A 122 O HOH A 1448 2.12 REMARK 500 O HOH A 1327 O HOH A 1674 2.15 REMARK 500 O HOH A 1385 O HOH A 1544 2.16 REMARK 500 O HOH A 1319 O HOH A 1522 2.17 REMARK 500 O HOH A 1235 O HOH A 1457 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 80 -130.24 52.86 REMARK 500 TRP A 149 -2.80 94.39 REMARK 500 ASP A 150 64.06 -101.74 REMARK 500 ASP A 193 70.25 49.32 REMARK 500 ILE A 216 -65.86 -137.81 REMARK 500 ASP A 291 170.57 68.82 REMARK 500 GLU A 451 53.90 -95.51 REMARK 500 TRP A 452 -131.75 54.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 THE LIGAND PNW IS CALLED AS PNPG, P-NITROPHENYL-BETA-D- REMARK 600 GLUCOPYRANOSIDE, IN THE ARTICLE. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3AHX RELATED DB: PDB REMARK 900 BETA-GLUCOSIDASE A FROM BACTERIUM CLOSTRIDIUM CELLULOVORANS REMARK 900 RELATED ID: 3AHY RELATED DB: PDB REMARK 900 BETA-GLUCOSIDASE 2 FROM FUNGUS TRICHODERMA REESEI IN COMPLEX WITH REMARK 900 TRIS REMARK 900 RELATED ID: 3AHZ RELATED DB: PDB REMARK 900 BETA-GLUCOSIDASE FROM TERMITE NEOTERMES KOSHUNENSIS IN COMPLEX WITH REMARK 900 TRIS DBREF 3AI0 A 21 498 UNP Q8T0W7 Q8T0W7_9NEOP 21 498 SEQADV 3AI0 MET A 20 UNP Q8T0W7 EXPRESSION TAG SEQADV 3AI0 ASP A 193 UNP Q8T0W7 GLU 193 ENGINEERED MUTATION SEQADV 3AI0 LEU A 499 UNP Q8T0W7 EXPRESSION TAG SEQADV 3AI0 GLU A 500 UNP Q8T0W7 EXPRESSION TAG SEQADV 3AI0 HIS A 501 UNP Q8T0W7 EXPRESSION TAG SEQADV 3AI0 HIS A 502 UNP Q8T0W7 EXPRESSION TAG SEQADV 3AI0 HIS A 503 UNP Q8T0W7 EXPRESSION TAG SEQADV 3AI0 HIS A 504 UNP Q8T0W7 EXPRESSION TAG SEQADV 3AI0 HIS A 505 UNP Q8T0W7 EXPRESSION TAG SEQADV 3AI0 HIS A 506 UNP Q8T0W7 EXPRESSION TAG SEQRES 1 A 487 MET ASP VAL ALA SER SER ASP THR VAL TYR THR PHE PRO SEQRES 2 A 487 ASP GLU PHE LYS LEU GLY ALA ALA THR ALA SER TYR GLN SEQRES 3 A 487 ILE GLU GLY ALA TRP ASP GLU ASN GLY LYS GLY PRO ASN SEQRES 4 A 487 ILE TRP ASP THR LEU THR HIS GLU HIS PRO ASP TYR VAL SEQRES 5 A 487 VAL ASP GLY ALA THR GLY ASP ILE ALA ASP ASP SER TYR SEQRES 6 A 487 HIS LEU TYR LYS GLU ASP VAL LYS ILE LEU LYS GLU LEU SEQRES 7 A 487 GLY ALA GLN VAL TYR ARG PHE SER ILE SER TRP ALA ARG SEQRES 8 A 487 VAL LEU PRO GLU GLY HIS ASP ASN ILE VAL ASN GLN ASP SEQRES 9 A 487 GLY ILE ASP TYR TYR ASN ASN LEU ILE ASN GLU LEU LEU SEQRES 10 A 487 ALA ASN GLY ILE GLU PRO MET VAL THR MET TYR HIS TRP SEQRES 11 A 487 ASP LEU PRO GLN ALA LEU GLN ASP LEU GLY GLY TRP PRO SEQRES 12 A 487 ASN LEU VAL LEU ALA LYS TYR SER GLU ASN TYR ALA ARG SEQRES 13 A 487 VAL LEU PHE LYS ASN PHE GLY ASP ARG VAL LYS LEU TRP SEQRES 14 A 487 LEU THR PHE ASN ASP PRO LEU THR PHE MET ASP GLY TYR SEQRES 15 A 487 ALA SER GLU ILE GLY MET ALA PRO SER ILE ASN THR PRO SEQRES 16 A 487 GLY ILE GLY ASP TYR LEU ALA ALA HIS THR VAL ILE HIS SEQRES 17 A 487 ALA HIS ALA ARG ILE TYR HIS LEU TYR ASP GLN GLU PHE SEQRES 18 A 487 ARG ALA GLU GLN GLY GLY LYS VAL GLY ILE SER LEU ASN SEQRES 19 A 487 ILE ASN TRP CYS GLU PRO ALA THR ASN SER ALA GLU ASP SEQRES 20 A 487 ARG ALA SER CYS GLU ASN TYR GLN GLN PHE ASN LEU GLY SEQRES 21 A 487 LEU TYR ALA HIS PRO ILE PHE THR GLU GLU GLY ASP TYR SEQRES 22 A 487 PRO ALA VAL LEU LYS ASP ARG VAL SER ARG ASN SER ALA SEQRES 23 A 487 ASP GLU GLY TYR THR ASP SER ARG LEU PRO GLN PHE THR SEQRES 24 A 487 ALA GLU GLU VAL GLU TYR ILE ARG GLY THR HIS ASP PHE SEQRES 25 A 487 LEU GLY ILE ASN PHE TYR THR ALA LEU LEU GLY LYS SER SEQRES 26 A 487 GLY VAL GLU GLY TYR GLU PRO SER ARG TYR ARG ASP SER SEQRES 27 A 487 GLY VAL ILE LEU THR GLN ASP ALA ALA TRP PRO ILE SER SEQRES 28 A 487 ALA SER SER TRP LEU LYS VAL VAL PRO TRP GLY PHE ARG SEQRES 29 A 487 LYS GLU LEU ASN TRP ILE LYS ASN GLU TYR ASN ASN PRO SEQRES 30 A 487 PRO VAL PHE ILE THR GLU ASN GLY PHE SER ASP TYR GLY SEQRES 31 A 487 GLY LEU ASN ASP THR GLY ARG VAL HIS TYR TYR THR GLU SEQRES 32 A 487 HIS LEU LYS GLU MET LEU LYS ALA ILE HIS GLU ASP GLY SEQRES 33 A 487 VAL ASN VAL ILE GLY TYR THR ALA TRP SER LEU MET ASP SEQRES 34 A 487 ASN PHE GLU TRP LEU ARG GLY TYR SER GLU LYS PHE GLY SEQRES 35 A 487 ILE TYR ALA VAL ASP PHE GLU ASP PRO ALA ARG PRO ARG SEQRES 36 A 487 ILE PRO LYS GLU SER ALA LYS VAL LEU ALA GLU ILE MET SEQRES 37 A 487 ASN THR ARG LYS ILE PRO GLU ARG PHE ARG ASP LEU GLU SEQRES 38 A 487 HIS HIS HIS HIS HIS HIS HET PNW A2001 21 HET GOL A2002 6 HETNAM PNW 4-NITROPHENYL BETA-D-GLUCOPYRANOSIDE HETNAM GOL GLYCEROL HETSYN PNW 4'-NITROPHENYL-BETA-D-GLUCOPYRANOSIDE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 PNW C12 H15 N O8 FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *781(H2 O) HELIX 1 1 ALA A 42 GLU A 47 1 6 HELIX 2 2 ASP A 51 LYS A 55 5 5 HELIX 3 3 ASN A 58 HIS A 67 1 10 HELIX 4 4 PRO A 68 ALA A 75 5 8 HELIX 5 5 ASP A 82 GLY A 98 1 17 HELIX 6 6 SER A 107 LEU A 112 1 6 HELIX 7 7 ASN A 121 ASN A 138 1 18 HELIX 8 8 PRO A 152 ASP A 157 1 6 HELIX 9 9 VAL A 165 GLY A 182 1 18 HELIX 10 10 ASP A 193 MET A 198 1 6 HELIX 11 11 ASP A 199 ALA A 202 5 4 HELIX 12 12 ILE A 216 PHE A 240 1 25 HELIX 13 13 PHE A 240 GLY A 245 1 6 HELIX 14 14 SER A 263 LEU A 278 1 16 HELIX 15 15 LEU A 278 THR A 287 1 10 HELIX 16 16 PRO A 293 GLU A 307 1 15 HELIX 17 17 THR A 318 ARG A 326 1 9 HELIX 18 18 SER A 352 GLY A 358 1 7 HELIX 19 19 VAL A 378 ASN A 394 1 17 HELIX 20 20 ASP A 413 GLU A 433 1 21 HELIX 21 21 GLU A 451 GLY A 455 5 5 HELIX 22 22 LYS A 477 ARG A 490 1 14 HELIX 23 23 PRO A 493 ARG A 497 5 5 SHEET 1 A 9 LYS A 36 ALA A 40 0 SHEET 2 A 9 VAL A 101 SER A 105 1 O ARG A 103 N ALA A 39 SHEET 3 A 9 GLU A 141 TYR A 147 1 O THR A 145 N PHE A 104 SHEET 4 A 9 LEU A 187 ASN A 192 1 O LEU A 189 N MET A 146 SHEET 5 A 9 LYS A 247 ASN A 253 1 O GLY A 249 N TRP A 188 SHEET 6 A 9 PHE A 331 ASN A 335 1 O GLY A 333 N ILE A 250 SHEET 7 A 9 VAL A 398 GLU A 402 1 O PHE A 399 N LEU A 332 SHEET 8 A 9 VAL A 438 TRP A 444 1 O ILE A 439 N VAL A 398 SHEET 9 A 9 LYS A 36 ALA A 40 1 N LYS A 36 O TYR A 441 SHEET 1 B 3 TRP A 256 PRO A 259 0 SHEET 2 B 3 ALA A 339 LYS A 343 1 O LEU A 340 N GLU A 258 SHEET 3 B 3 ILE A 360 THR A 362 -1 O THR A 362 N LEU A 341 SHEET 1 C 2 TYR A 463 VAL A 465 0 SHEET 2 C 2 ARG A 474 PRO A 476 -1 O ILE A 475 N ALA A 464 CISPEP 1 ALA A 208 PRO A 209 0 8.16 CISPEP 2 GLU A 350 PRO A 351 0 -4.35 CISPEP 3 TRP A 444 SER A 445 0 -1.30 CRYST1 93.089 68.755 75.746 90.00 95.68 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010742 0.000000 0.001068 0.00000 SCALE2 0.000000 0.014544 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013267 0.00000