HEADER SIGNALING PROTEIN 05-APR-07 2YT2 TITLE SOLUTION STRUCTURE OF THE CHIMERA OF THE PTB DOMAIN OF SNT-2 AND 19- TITLE 2 RESIDUE PEPTIDE (AA 1571-1589) OF HALK COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBROBLAST GROWTH FACTOR RECEPTOR SUBSTRATE 3 AND ALK COMPND 3 TYROSINE KINASE RECEPTOR; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: PTB DOMAIN AND 19-RESIDUE PEPTIDE; COMPND 6 SYNONYM: FGFR SUBSTRATE 3, SUC1-ASSOCIATED NEUROTROPHIC FACTOR TARGET COMPND 7 2, SNT-2, FGFR-SIGNALING ADAPTOR SNT2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: P060724-01; SOURCE 7 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS CHIMERA, SNT-2, PTB DOMAIN, HALK, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 3 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, SIGNALING KEYWDS 4 PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.LI,S.KOSHIBA,T.TOMIZAWA,S.WATANABE,T.HARADA,T.KIGAWA,S.YOKOYAMA, AUTHOR 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 12-FEB-14 2YT2 1 JRNL VERSN REVDAT 3 26-MAY-10 2YT2 1 JRNL REVDAT 2 24-FEB-09 2YT2 1 VERSN REVDAT 1 08-APR-08 2YT2 0 JRNL AUTH S.KOSHIBA,H.LI,Y.MOTODA,T.TOMIZAWA,T.KASAI,N.TOCHIO, JRNL AUTH 2 T.YABUKI,T.HARADA,S.WATANABE,A.TANAKA,M.SHIROUZU,T.KIGAWA, JRNL AUTH 3 T.YAMAMOTO,S.YOKOYAMA JRNL TITL STRUCTURAL BASIS FOR THE RECOGNITION OF JRNL TITL 2 NUCLEOPHOSMIN-ANAPLASTIC LYMPHOMA KINASE ONCOPROTEIN BY THE JRNL TITL 3 PHOSPHOTYROSINE BINDING DOMAIN OF SUC1-ASSOCIATED JRNL TITL 4 NEUROTROPHIC FACTOR-INDUCED TYROSINE-PHOSPHORYLATED TARGET-2 JRNL REF J.STRUCT.FUNCT.GENOM. V. 11 125 2010 JRNL REFN ISSN 1345-711X JRNL PMID 20454865 JRNL DOI 10.1007/S10969-010-9091-X REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2YT2 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-JUN-07. REMARK 100 THE RCSB ID CODE IS RCSB027098. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.12MM CHIMERA SAMPLE U-15N, REMARK 210 13C; 20MM D-TRIS-HCL; 100MM NACL; REMARK 210 1MM D-DTT; 0.02% NAN3; 90% H2O, REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N- REMARK 210 SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE 20031121, REMARK 210 NMRVIEW 5.0.4, KUJIRA 0.9820, REMARK 210 CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS,TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ARG A 10 56.90 -116.58 REMARK 500 1 THR A 19 -70.33 -75.96 REMARK 500 1 SER A 43 -75.05 -59.02 REMARK 500 1 HIS A 50 179.64 -51.84 REMARK 500 1 GLU A 53 156.42 -37.59 REMARK 500 1 LEU A 62 92.13 -55.48 REMARK 500 1 ARG A 78 37.33 -83.68 REMARK 500 1 GLN A 81 -70.31 -37.28 REMARK 500 1 SER A 109 96.80 -60.25 REMARK 500 1 SER A 130 155.97 -37.62 REMARK 500 2 SER A 2 154.66 -44.05 REMARK 500 2 SER A 12 -75.25 -64.10 REMARK 500 2 HIS A 17 133.38 -39.99 REMARK 500 2 THR A 19 -72.28 -89.94 REMARK 500 2 SER A 43 -71.38 -76.46 REMARK 500 2 HIS A 50 -74.20 -91.93 REMARK 500 2 LEU A 62 92.26 -58.63 REMARK 500 2 SER A 69 109.28 -54.28 REMARK 500 2 CYS A 91 140.76 -172.60 REMARK 500 2 PRO A 116 -176.59 -69.72 REMARK 500 2 SER A 129 143.91 -38.79 REMARK 500 2 ASN A 145 88.23 -63.97 REMARK 500 2 GLN A 151 37.10 -86.85 REMARK 500 2 GLN A 152 77.11 -111.94 REMARK 500 3 VAL A 13 122.69 -172.74 REMARK 500 3 PRO A 14 -164.66 -69.76 REMARK 500 3 SER A 43 -71.77 -58.26 REMARK 500 3 LEU A 62 104.73 -49.87 REMARK 500 3 SER A 69 -74.27 -38.20 REMARK 500 3 GLN A 81 -73.06 -38.22 REMARK 500 3 ARG A 93 40.59 -86.54 REMARK 500 3 ASN A 108 -64.56 -106.85 REMARK 500 3 VAL A 112 128.91 -37.98 REMARK 500 3 THR A 120 43.44 38.83 REMARK 500 3 SER A 126 -62.24 -132.94 REMARK 500 3 SER A 130 -52.69 -133.30 REMARK 500 3 LEU A 135 151.18 -37.87 REMARK 500 3 ASN A 145 91.09 -63.58 REMARK 500 4 ASP A 11 -75.06 -68.97 REMARK 500 4 THR A 19 -70.46 -87.80 REMARK 500 4 LEU A 33 -70.81 -102.75 REMARK 500 4 SER A 43 -74.60 -70.54 REMARK 500 4 LEU A 60 -34.32 -39.47 REMARK 500 4 LEU A 62 99.27 -52.24 REMARK 500 4 TYR A 65 146.42 -172.91 REMARK 500 4 GLN A 84 130.33 -36.50 REMARK 500 4 VAL A 112 95.77 -63.75 REMARK 500 4 PRO A 116 -176.17 -69.78 REMARK 500 4 SER A 129 137.73 -34.64 REMARK 500 4 SER A 132 159.72 -39.36 REMARK 500 REMARK 500 THIS ENTRY HAS 229 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED DBREF 2YT2 A 8 120 UNP O43559 FRS3_HUMAN 8 120 DBREF 2YT2 A 135 153 UNP Q9UM73 ALK_HUMAN 1571 1589 SEQADV 2YT2 GLY A 1 UNP O43559 EXPRESSION TAG SEQADV 2YT2 SER A 2 UNP O43559 EXPRESSION TAG SEQADV 2YT2 SER A 3 UNP O43559 EXPRESSION TAG SEQADV 2YT2 GLY A 4 UNP O43559 EXPRESSION TAG SEQADV 2YT2 SER A 5 UNP O43559 EXPRESSION TAG SEQADV 2YT2 SER A 6 UNP O43559 EXPRESSION TAG SEQADV 2YT2 GLY A 7 UNP O43559 EXPRESSION TAG SEQADV 2YT2 SER A 121 UNP O43559 EXPRESSION TAG SEQADV 2YT2 GLY A 122 UNP O43559 EXPRESSION TAG SEQADV 2YT2 SER A 123 UNP O43559 EXPRESSION TAG SEQADV 2YT2 SER A 124 UNP O43559 EXPRESSION TAG SEQADV 2YT2 GLY A 125 UNP O43559 EXPRESSION TAG SEQADV 2YT2 SER A 126 UNP O43559 EXPRESSION TAG SEQADV 2YT2 SER A 127 UNP O43559 EXPRESSION TAG SEQADV 2YT2 GLY A 128 UNP O43559 EXPRESSION TAG SEQADV 2YT2 SER A 129 UNP O43559 EXPRESSION TAG SEQADV 2YT2 SER A 130 UNP O43559 EXPRESSION TAG SEQADV 2YT2 GLY A 131 UNP O43559 EXPRESSION TAG SEQADV 2YT2 SER A 132 UNP O43559 EXPRESSION TAG SEQADV 2YT2 SER A 133 UNP O43559 EXPRESSION TAG SEQADV 2YT2 GLY A 134 UNP O43559 EXPRESSION TAG SEQRES 1 A 153 GLY SER SER GLY SER SER GLY LEU ASN ARG ASP SER VAL SEQRES 2 A 153 PRO ASP ASN HIS PRO THR LYS PHE LYS VAL THR ASN VAL SEQRES 3 A 153 ASP ASP GLU GLY VAL GLU LEU GLY SER GLY VAL MET GLU SEQRES 4 A 153 LEU THR GLN SER GLU LEU VAL LEU HIS LEU HIS ARG ARG SEQRES 5 A 153 GLU ALA VAL ARG TRP PRO TYR LEU CYS LEU ARG ARG TYR SEQRES 6 A 153 GLY TYR ASP SER ASN LEU PHE SER PHE GLU SER GLY ARG SEQRES 7 A 153 ARG CYS GLN THR GLY GLN GLY ILE PHE ALA PHE LYS CYS SEQRES 8 A 153 SER ARG ALA GLU GLU ILE PHE ASN LEU LEU GLN ASP LEU SEQRES 9 A 153 MET GLN CYS ASN SER ILE ASN VAL MET GLU GLU PRO VAL SEQRES 10 A 153 ILE ILE THR SER GLY SER SER GLY SER SER GLY SER SER SEQRES 11 A 153 GLY SER SER GLY LEU PHE ARG LEU ARG HIS PHE PRO CYS SEQRES 12 A 153 GLY ASN VAL ASN TYR GLY TYR GLN GLN GLN HELIX 1 1 ALA A 94 CYS A 107 1 14 SHEET 1 A 4 LYS A 20 VAL A 26 0 SHEET 2 A 4 GLU A 32 LEU A 40 -1 SHEET 3 A 4 LEU A 45 HIS A 48 -1 SHEET 4 A 4 ALA A 54 TRP A 57 -1 SHEET 1 B 4 GLY A 85 LYS A 90 0 SHEET 2 B 4 LEU A 71 SER A 76 -1 SHEET 3 B 4 LEU A 62 ASP A 68 -1 SHEET 4 B 4 VAL A 146 TYR A 148 -1 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 MODEL 2 MODEL 3 MODEL 4 MODEL 5 MODEL 6 MODEL 7 MODEL 8 MODEL 9 MODEL 10 MODEL 11 MODEL 12 MODEL 13 MODEL 14 MODEL 15 MODEL 16 MODEL 17 MODEL 18 MODEL 19 MODEL 20