HEADER PROTEIN TURNOVER, LIGASE 13-NOV-06 2NVU TITLE STRUCTURE OF APPBP1-UBA3~NEDD8-NEDD8-MGATP-UBC12(C111A), A TRAPPED TITLE 2 UBIQUITIN-LIKE PROTEIN ACTIVATION COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEDD8-ACTIVATING ENZYME E1 REGULATORY SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AMYLOID PROTEIN-BINDING PROTEIN 1, AMYLOID BETA PRECURSOR COMPND 5 PROTEIN-BINDING PROTEIN 1, 59 KDA, APP-BP1, PROTOONCOGENE PROTEIN 1, COMPND 6 HPP1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: MALTOSE BINDING PROTEIN/NEDD8-ACTIVATING ENZYME E1 COMPND 10 CATALYTIC SUBUNIT CHIMERA; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: RESIDUES 33-463; COMPND 13 SYNONYM: MBP, UBIQUITIN-ACTIVATING ENZYME 3, NEDD8-ACTIVATING ENZYME COMPND 14 E1C, UBIQUITIN-ACTIVATING ENZYME E1C; COMPND 15 EC: 6.3.2.-; COMPND 16 ENGINEERED: YES; COMPND 17 OTHER_DETAILS: FUSION PROTEIN. MALTOSE BINDING PROTEIN (RESIDUES COMPND 18 1001-1371), AND THE NEDD8-ACTIVATING ENZYME E1 CATALYTIC SUBUNIT COMPND 19 (RESIDUES 2012-2442) IS FROM A HUMAN SOURCE; COMPND 20 MOL_ID: 3; COMPND 21 MOLECULE: NEDD8-CONJUGATING ENZYME UBC12; COMPND 22 CHAIN: C; COMPND 23 SYNONYM: UBIQUITIN-CONJUGATING ENZYME E2 M, NEDD8 PROTEIN LIGASE, COMPND 24 NEDD8 CARRIER PROTEIN; COMPND 25 EC: 6.3.2.-; COMPND 26 ENGINEERED: YES; COMPND 27 MUTATION: YES; COMPND 28 MOL_ID: 4; COMPND 29 MOLECULE: NEDD8; COMPND 30 CHAIN: I, J; COMPND 31 SYNONYM: UBIQUITIN-LIKE PROTEIN NEDD8, NEDDYLIN; COMPND 32 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: APPBP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: BICISTRONIC PGEX4T-3 DERIVATIVE; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PGEX4T-1; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 GENE: UBE1C, UBA3; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 19 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)GOLD; SOURCE 20 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 21 EXPRESSION_SYSTEM_VECTOR: BICISTRONIC PGEX4T-3 DERIVATIVE; SOURCE 22 EXPRESSION_SYSTEM_PLASMID: PGEX4T-1; SOURCE 23 MOL_ID: 3; SOURCE 24 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 25 ORGANISM_COMMON: HUMAN; SOURCE 26 ORGANISM_TAXID: 9606; SOURCE 27 GENE: UBE2M, UBC12; SOURCE 28 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 29 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 30 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)GOLD; SOURCE 31 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 32 EXPRESSION_SYSTEM_VECTOR: BICISTRONIC PGEX4T-3 DERIVATIVE; SOURCE 33 EXPRESSION_SYSTEM_PLASMID: PGEX4T-1; SOURCE 34 MOL_ID: 4; SOURCE 35 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 36 ORGANISM_COMMON: HUMAN; SOURCE 37 ORGANISM_TAXID: 9606; SOURCE 38 GENE: NEDD8; SOURCE 39 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 40 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 41 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)GOLD; SOURCE 42 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 43 EXPRESSION_SYSTEM_VECTOR: BICISTRONIC PGEX4T-3 DERIVATIVE; SOURCE 44 EXPRESSION_SYSTEM_PLASMID: PGEX4T-1 KEYWDS MULTIFUNCTION MACROMOLECULAR COMPLEX, UBIQUITIN, NEDD8, E1, E2, ATP, KEYWDS 2 CONFORMATIONAL CHANGE, THIOESTER, SWITCH, ADENYLATION, PROTEIN KEYWDS 3 TURNOVER, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR D.T.HUANG,H.W.HUNT,M.ZHUANG,M.D.OHI,J.M.HOLTON,B.A.SCHULMAN REVDAT 4 20-OCT-21 2NVU 1 REMARK SEQADV LINK REVDAT 3 24-FEB-09 2NVU 1 VERSN REVDAT 2 13-FEB-07 2NVU 1 JRNL REVDAT 1 30-JAN-07 2NVU 0 JRNL AUTH D.T.HUANG,H.W.HUNT,M.ZHUANG,M.D.OHI,J.M.HOLTON,B.A.SCHULMAN JRNL TITL BASIS FOR A UBIQUITIN-LIKE PROTEIN THIOESTER SWITCH TOGGLING JRNL TITL 2 E1-E2 AFFINITY. JRNL REF NATURE V. 445 394 2007 JRNL REFN ISSN 0028-0836 JRNL PMID 17220875 JRNL DOI 10.1038/NATURE05490 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 65807 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3298 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 13012 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 45 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 83.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -14.19900 REMARK 3 B22 (A**2) : -14.19900 REMARK 3 B33 (A**2) : 28.39700 REMARK 3 B12 (A**2) : -11.80800 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.440 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : NULL REMARK 3 BSOL : 32.29 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR:PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 3 : CNS_TOPPAR:WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ATP.PAR REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2NVU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-NOV-06. REMARK 100 THE DEPOSITION ID IS D_1000040364. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97930 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65807 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.13400 REMARK 200 FOR THE DATA SET : 25.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 1R4M, 1Y8X REMARK 200 REMARK 200 REMARK: AUTHORS SCREENED >900 CRYSTALS AND USED ALL THREE REMARK 200 BEAMLINES TO OBTAIN NECESSARY INFORMATION FOR FINAL STRUCTURE REMARK 200 DETERMINATION FROM SINGLE CRYSTAL AT APS BEAMLINE 22-ID REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17% V/V PEG 3350, 0.1 M HEPES PH 7.0, REMARK 280 0.2 M DISODIUM TARTRATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K, PH 7.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 126.99000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 63.49500 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 63.49500 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 126.99000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLN A 3 REMARK 465 LEU A 4 REMARK 465 MET B 998 REMARK 465 LYS B 999 REMARK 465 LEU B 1000 REMARK 465 MET B 1001 REMARK 465 PRO B 1299 REMARK 465 LEU B 1300 REMARK 465 GLY B 1301 REMARK 465 ALA B 1302 REMARK 465 LEU B 1312 REMARK 465 ALA B 1313 REMARK 465 LYS B 1314 REMARK 465 ASP B 1315 REMARK 465 PRO B 1316 REMARK 465 ARG B 1317 REMARK 465 ILE B 1318 REMARK 465 ALA B 1319 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 ILE C 2 REMARK 465 GLY I -4 REMARK 465 SER I -3 REMARK 465 GLY I -2 REMARK 465 GLY I -1 REMARK 465 SER I 0 REMARK 465 GLY J -4 REMARK 465 SER J -3 REMARK 465 GLY J -2 REMARK 465 GLY J -1 REMARK 465 SER J 0 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS C 8 CE NZ REMARK 480 LYS C 25 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS B 2216 O GLY J 76 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU I 73 CA - CB - CG ANGL. DEV. = -15.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 37 116.44 74.63 REMARK 500 MET A 90 -38.56 -36.35 REMARK 500 ASN A 97 104.54 -162.86 REMARK 500 ASP A 114 -60.18 -92.89 REMARK 500 SER A 136 -71.45 -60.12 REMARK 500 ILE A 172 -65.26 -94.32 REMARK 500 ASP A 182 66.92 -112.73 REMARK 500 PRO A 190 -69.60 -25.53 REMARK 500 LEU A 201 -3.15 -58.70 REMARK 500 HIS A 203 30.67 -91.31 REMARK 500 LYS A 220 -74.25 -64.41 REMARK 500 GLU A 228 15.68 -59.96 REMARK 500 PRO A 234 142.78 -36.71 REMARK 500 LYS A 235 -36.32 -144.39 REMARK 500 THR A 274 -34.05 -136.91 REMARK 500 LYS A 317 -98.78 -108.81 REMARK 500 PRO A 372 -0.52 -54.11 REMARK 500 MET A 416 0.51 -63.27 REMARK 500 PHE A 513 179.68 73.11 REMARK 500 ASN A 518 -81.72 177.17 REMARK 500 ASP B1015 20.74 -73.42 REMARK 500 VAL B1098 63.46 -109.08 REMARK 500 ILE B1109 -68.20 -109.76 REMARK 500 MET B1149 114.98 -169.08 REMARK 500 PRO B1155 0.16 -65.68 REMARK 500 ALA B1169 -72.42 -53.29 REMARK 500 ASN B1174 -50.62 -19.18 REMARK 500 ALA B1207 -8.55 -59.60 REMARK 500 THR B1209 88.94 -59.50 REMARK 500 ASN B1228 -148.40 -158.70 REMARK 500 TYR B1243 -169.55 -166.83 REMARK 500 VAL B1245 67.58 -108.36 REMARK 500 THR B1250 -169.88 -64.38 REMARK 500 LYS B1252 49.75 37.59 REMARK 500 GLN B1254 155.29 -43.90 REMARK 500 ASN B1273 36.53 -85.89 REMARK 500 LEU B1281 -76.32 -97.77 REMARK 500 GLU B1282 -17.37 -48.39 REMARK 500 ASN B1283 -64.99 -123.53 REMARK 500 TYR B1284 31.20 -75.72 REMARK 500 LEU B1285 -57.09 -164.58 REMARK 500 PRO B1332 155.95 -42.17 REMARK 500 ALA B1351 -82.02 -47.71 REMARK 500 CYS B2049 97.47 -59.06 REMARK 500 ARG B2073 -36.24 -130.90 REMARK 500 ARG B2090 -27.19 -145.43 REMARK 500 PHE B2092 -3.28 -56.35 REMARK 500 ASN B2117 11.69 80.19 REMARK 500 GLN B2128 0.15 -66.42 REMARK 500 GLU B2183 111.95 -160.92 REMARK 500 REMARK 500 THIS ENTRY HAS 74 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 45 O REMARK 620 2 ATP B 103 O3G 73.9 REMARK 620 3 ATP B 103 O2B 63.5 81.4 REMARK 620 4 ASP B2146 OD2 116.6 147.4 77.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 102 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B2199 SG REMARK 620 2 CYS B2202 SG 107.3 REMARK 620 3 CYS B2343 SG 103.1 107.1 REMARK 620 4 CYS B2346 SG 113.6 109.2 116.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 103 REMARK 999 REMARK 999 SEQUENCE REMARK 999 ENTITY 2 (CHAIN B) CONTAINS TWO DIFFERENT PROTEINS: REMARK 999 MALTOSE BINDING PROTEIN (MBP, RESIDUES 1001-1368) REMARK 999 AND NEDD8-ACTIVATING ENZYME E1 CATALYTIC SUBUNIT REMARK 999 (UBA3, RESIDUES 2012-2442) CONNECTED BY THE REMARK 999 ALA-ALA-ALA LINKER (RESIDUES 1369-1371). REMARK 999 THERE IS NO DATABASE SEQUENCE AVAILABLE AT UNIPROT REMARK 999 FOR MBP AT THE TIME OF DEPOSITION. AUTHORS STATE REMARK 999 THAT THE MBP SEQUENCE IS AVAILABLE ONLY IN NCBI REMARK 999 DATABASE WITH ACCESSION NUMBERS AAB86559 OR 1R6Z_P. REMARK 999 PROTEIN UBA3 HAS A DATABASE SEQUENCE REFERENCE IN REMARK 999 UNIPROT WHICH IS STATED IN DBREF. REMARK 999 ENTITY 2 ALSO CONTAINS N-TERMINAL CLONING ARTIFACT REMARK 999 (RESIDUES MET-LYS-LEU, RESIDUES 998-1000) AND THREE REMARK 999 MUTATIONS (E1360A,K1363A,D1364A). REMARK 999 THE C-TERMINAL CARBON ATOM OF CHAIN "J" (RESIDUE 76) REMARK 999 FORMS A THIOESTER LINK WITH CHAIN "B" BY THE SIDE REMARK 999 CHAIN ATOM SG OF RESIDUE 2216 OF THE UBA3 MOIETY DBREF 2NVU A 1 534 UNP Q13564 ULA1_HUMAN 1 534 DBREF 2NVU B 2012 2442 UNP Q8TBC4 UBA3_HUMAN 33 463 DBREF 2NVU C 1 178 UNP P61081 UBC12_HUMAN 1 183 DBREF 2NVU I 1 76 UNP Q15843 NEDD8_HUMAN 1 76 DBREF 2NVU J 1 76 UNP Q15843 NEDD8_HUMAN 1 76 SEQADV 2NVU GLY A -1 UNP Q13564 CLONING ARTIFACT SEQADV 2NVU SER A 0 UNP Q13564 CLONING ARTIFACT SEQADV 2NVU MET B 998 UNP Q8TBC4 SEE REMARK 999 SEQADV 2NVU LYS B 999 UNP Q8TBC4 SEE REMARK 999 SEQADV 2NVU LEU B 1000 UNP Q8TBC4 SEE REMARK 999 SEQADV 2NVU MET B 1001 UNP Q8TBC4 SEE REMARK 999 SEQADV 2NVU ALA B 1371 UNP Q8TBC4 SEE REMARK 999 SEQADV 2NVU GLY C -1 UNP P61081 CLONING ARTIFACT SEQADV 2NVU SER C 0 UNP P61081 CLONING ARTIFACT SEQADV 2NVU C UNP P61081 SER 16 DELETION SEQADV 2NVU C UNP P61081 ALA 17 DELETION SEQADV 2NVU C UNP P61081 GLY 18 DELETION SEQADV 2NVU C UNP P61081 GLY 19 DELETION SEQADV 2NVU C UNP P61081 THR 20 DELETION SEQADV 2NVU ALA C 111 UNP P61081 CYS 111 ENGINEERED MUTATION SEQADV 2NVU GLY I -4 UNP Q15843 CLONING ARTIFACT SEQADV 2NVU SER I -3 UNP Q15843 CLONING ARTIFACT SEQADV 2NVU GLY I -2 UNP Q15843 CLONING ARTIFACT SEQADV 2NVU GLY I -1 UNP Q15843 CLONING ARTIFACT SEQADV 2NVU SER I 0 UNP Q15843 CLONING ARTIFACT SEQADV 2NVU GLY J -4 UNP Q15843 CLONING ARTIFACT SEQADV 2NVU SER J -3 UNP Q15843 CLONING ARTIFACT SEQADV 2NVU GLY J -2 UNP Q15843 CLONING ARTIFACT SEQADV 2NVU GLY J -1 UNP Q15843 CLONING ARTIFACT SEQADV 2NVU SER J 0 UNP Q15843 CLONING ARTIFACT SEQRES 1 A 536 GLY SER MET ALA GLN LEU GLY LYS LEU LEU LYS GLU GLN SEQRES 2 A 536 LYS TYR ASP ARG GLN LEU ARG LEU TRP GLY ASP HIS GLY SEQRES 3 A 536 GLN GLU ALA LEU GLU SER ALA HIS VAL CYS LEU ILE ASN SEQRES 4 A 536 ALA THR ALA THR GLY THR GLU ILE LEU LYS ASN LEU VAL SEQRES 5 A 536 LEU PRO GLY ILE GLY SER PHE THR ILE ILE ASP GLY ASN SEQRES 6 A 536 GLN VAL SER GLY GLU ASP ALA GLY ASN ASN PHE PHE LEU SEQRES 7 A 536 GLN ARG SER SER ILE GLY LYS ASN ARG ALA GLU ALA ALA SEQRES 8 A 536 MET GLU PHE LEU GLN GLU LEU ASN SER ASP VAL SER GLY SEQRES 9 A 536 SER PHE VAL GLU GLU SER PRO GLU ASN LEU LEU ASP ASN SEQRES 10 A 536 ASP PRO SER PHE PHE CYS ARG PHE THR VAL VAL VAL ALA SEQRES 11 A 536 THR GLN LEU PRO GLU SER THR SER LEU ARG LEU ALA ASP SEQRES 12 A 536 VAL LEU TRP ASN SER GLN ILE PRO LEU LEU ILE CYS ARG SEQRES 13 A 536 THR TYR GLY LEU VAL GLY TYR MET ARG ILE ILE ILE LYS SEQRES 14 A 536 GLU HIS PRO VAL ILE GLU SER HIS PRO ASP ASN ALA LEU SEQRES 15 A 536 GLU ASP LEU ARG LEU ASP LYS PRO PHE PRO GLU LEU ARG SEQRES 16 A 536 GLU HIS PHE GLN SER TYR ASP LEU ASP HIS MET GLU LYS SEQRES 17 A 536 LYS ASP HIS SER HIS THR PRO TRP ILE VAL ILE ILE ALA SEQRES 18 A 536 LYS TYR LEU ALA GLN TRP TYR SER GLU THR ASN GLY ARG SEQRES 19 A 536 ILE PRO LYS THR TYR LYS GLU LYS GLU ASP PHE ARG ASP SEQRES 20 A 536 LEU ILE ARG GLN GLY ILE LEU LYS ASN GLU ASN GLY ALA SEQRES 21 A 536 PRO GLU ASP GLU GLU ASN PHE GLU GLU ALA ILE LYS ASN SEQRES 22 A 536 VAL ASN THR ALA LEU ASN THR THR GLN ILE PRO SER SER SEQRES 23 A 536 ILE GLU ASP ILE PHE ASN ASP ASP ARG CYS ILE ASN ILE SEQRES 24 A 536 THR LYS GLN THR PRO SER PHE TRP ILE LEU ALA ARG ALA SEQRES 25 A 536 LEU LYS GLU PHE VAL ALA LYS GLU GLY GLN GLY ASN LEU SEQRES 26 A 536 PRO VAL ARG GLY THR ILE PRO ASP MET ILE ALA ASP SER SEQRES 27 A 536 GLY LYS TYR ILE LYS LEU GLN ASN VAL TYR ARG GLU LYS SEQRES 28 A 536 ALA LYS LYS ASP ALA ALA ALA VAL GLY ASN HIS VAL ALA SEQRES 29 A 536 LYS LEU LEU GLN SER ILE GLY GLN ALA PRO GLU SER ILE SEQRES 30 A 536 SER GLU LYS GLU LEU LYS LEU LEU CYS SER ASN SER ALA SEQRES 31 A 536 PHE LEU ARG VAL VAL ARG CYS ARG SER LEU ALA GLU GLU SEQRES 32 A 536 TYR GLY LEU ASP THR ILE ASN LYS ASP GLU ILE ILE SER SEQRES 33 A 536 SER MET ASP ASN PRO ASP ASN GLU ILE VAL LEU TYR LEU SEQRES 34 A 536 MET LEU ARG ALA VAL ASP ARG PHE HIS LYS GLN GLN GLY SEQRES 35 A 536 ARG TYR PRO GLY VAL SER ASN TYR GLN VAL GLU GLU ASP SEQRES 36 A 536 ILE GLY LYS LEU LYS SER CYS LEU THR GLY PHE LEU GLN SEQRES 37 A 536 GLU TYR GLY LEU SER VAL MET VAL LYS ASP ASP TYR VAL SEQRES 38 A 536 HIS GLU PHE CYS ARG TYR GLY ALA ALA GLU PRO HIS THR SEQRES 39 A 536 ILE ALA ALA PHE LEU GLY GLY ALA ALA ALA GLN GLU VAL SEQRES 40 A 536 ILE LYS ILE ILE THR LYS GLN PHE VAL ILE PHE ASN ASN SEQRES 41 A 536 THR TYR ILE TYR SER GLY MET SER GLN THR SER ALA THR SEQRES 42 A 536 PHE GLN LEU SEQRES 1 B 805 MET LYS LEU MET LYS ILE GLU GLU GLY LYS LEU VAL ILE SEQRES 2 B 805 TRP ILE ASN GLY ASP LYS GLY TYR ASN GLY LEU ALA GLU SEQRES 3 B 805 VAL GLY LYS LYS PHE GLU LYS ASP THR GLY ILE LYS VAL SEQRES 4 B 805 THR VAL GLU HIS PRO ASP LYS LEU GLU GLU LYS PHE PRO SEQRES 5 B 805 GLN VAL ALA ALA THR GLY ASP GLY PRO ASP ILE ILE PHE SEQRES 6 B 805 TRP ALA HIS ASP ARG PHE GLY GLY TYR ALA GLN SER GLY SEQRES 7 B 805 LEU LEU ALA GLU ILE THR PRO ASP LYS ALA PHE GLN ASP SEQRES 8 B 805 LYS LEU TYR PRO PHE THR TRP ASP ALA VAL ARG TYR ASN SEQRES 9 B 805 GLY LYS LEU ILE ALA TYR PRO ILE ALA VAL GLU ALA LEU SEQRES 10 B 805 SER LEU ILE TYR ASN LYS ASP LEU LEU PRO ASN PRO PRO SEQRES 11 B 805 LYS THR TRP GLU GLU ILE PRO ALA LEU ASP LYS GLU LEU SEQRES 12 B 805 LYS ALA LYS GLY LYS SER ALA LEU MET PHE ASN LEU GLN SEQRES 13 B 805 GLU PRO TYR PHE THR TRP PRO LEU ILE ALA ALA ASP GLY SEQRES 14 B 805 GLY TYR ALA PHE LYS TYR GLU ASN GLY LYS TYR ASP ILE SEQRES 15 B 805 LYS ASP VAL GLY VAL ASP ASN ALA GLY ALA LYS ALA GLY SEQRES 16 B 805 LEU THR PHE LEU VAL ASP LEU ILE LYS ASN LYS HIS MET SEQRES 17 B 805 ASN ALA ASP THR ASP TYR SER ILE ALA GLU ALA ALA PHE SEQRES 18 B 805 ASN LYS GLY GLU THR ALA MET THR ILE ASN GLY PRO TRP SEQRES 19 B 805 ALA TRP SER ASN ILE ASP THR SER LYS VAL ASN TYR GLY SEQRES 20 B 805 VAL THR VAL LEU PRO THR PHE LYS GLY GLN PRO SER LYS SEQRES 21 B 805 PRO PHE VAL GLY VAL LEU SER ALA GLY ILE ASN ALA ALA SEQRES 22 B 805 SER PRO ASN LYS GLU LEU ALA LYS GLU PHE LEU GLU ASN SEQRES 23 B 805 TYR LEU LEU THR ASP GLU GLY LEU GLU ALA VAL ASN LYS SEQRES 24 B 805 ASP LYS PRO LEU GLY ALA VAL ALA LEU LYS SER TYR GLU SEQRES 25 B 805 GLU GLU LEU ALA LYS ASP PRO ARG ILE ALA ALA THR MET SEQRES 26 B 805 GLU ASN ALA GLN LYS GLY GLU ILE MET PRO ASN ILE PRO SEQRES 27 B 805 GLN MET SER ALA PHE TRP TYR ALA VAL ARG THR ALA VAL SEQRES 28 B 805 ILE ASN ALA ALA SER GLY ARG GLN THR VAL ASP ALA ALA SEQRES 29 B 805 LEU ALA ALA ALA GLN THR ASN ALA ALA ALA ASP TRP GLU SEQRES 30 B 805 GLY ARG TRP ASN HIS VAL LYS LYS PHE LEU GLU ARG SER SEQRES 31 B 805 GLY PRO PHE THR HIS PRO ASP PHE GLU PRO SER THR GLU SEQRES 32 B 805 SER LEU GLN PHE LEU LEU ASP THR CYS LYS VAL LEU VAL SEQRES 33 B 805 ILE GLY ALA GLY GLY LEU GLY CYS GLU LEU LEU LYS ASN SEQRES 34 B 805 LEU ALA LEU SER GLY PHE ARG GLN ILE HIS VAL ILE ASP SEQRES 35 B 805 MET ASP THR ILE ASP VAL SER ASN LEU ASN ARG GLN PHE SEQRES 36 B 805 LEU PHE ARG PRO LYS ASP ILE GLY ARG PRO LYS ALA GLU SEQRES 37 B 805 VAL ALA ALA GLU PHE LEU ASN ASP ARG VAL PRO ASN CYS SEQRES 38 B 805 ASN VAL VAL PRO HIS PHE ASN LYS ILE GLN ASP PHE ASN SEQRES 39 B 805 ASP THR PHE TYR ARG GLN PHE HIS ILE ILE VAL CYS GLY SEQRES 40 B 805 LEU ASP SER ILE ILE ALA ARG ARG TRP ILE ASN GLY MET SEQRES 41 B 805 LEU ILE SER LEU LEU ASN TYR GLU ASP GLY VAL LEU ASP SEQRES 42 B 805 PRO SER SER ILE VAL PRO LEU ILE ASP GLY GLY THR GLU SEQRES 43 B 805 GLY PHE LYS GLY ASN ALA ARG VAL ILE LEU PRO GLY MET SEQRES 44 B 805 THR ALA CYS ILE GLU CYS THR LEU GLU LEU TYR PRO PRO SEQRES 45 B 805 GLN VAL ASN PHE PRO MET CYS THR ILE ALA SER MET PRO SEQRES 46 B 805 ARG LEU PRO GLU HIS CYS ILE GLU TYR VAL ARG MET LEU SEQRES 47 B 805 GLN TRP PRO LYS GLU GLN PRO PHE GLY GLU GLY VAL PRO SEQRES 48 B 805 LEU ASP GLY ASP ASP PRO GLU HIS ILE GLN TRP ILE PHE SEQRES 49 B 805 GLN LYS SER LEU GLU ARG ALA SER GLN TYR ASN ILE ARG SEQRES 50 B 805 GLY VAL THR TYR ARG LEU THR GLN GLY VAL VAL LYS ARG SEQRES 51 B 805 ILE ILE PRO ALA VAL ALA SER THR ASN ALA VAL ILE ALA SEQRES 52 B 805 ALA VAL CYS ALA THR GLU VAL PHE LYS ILE ALA THR SER SEQRES 53 B 805 ALA TYR ILE PRO LEU ASN ASN TYR LEU VAL PHE ASN ASP SEQRES 54 B 805 VAL ASP GLY LEU TYR THR TYR THR PHE GLU ALA GLU ARG SEQRES 55 B 805 LYS GLU ASN CYS PRO ALA CYS SER GLN LEU PRO GLN ASN SEQRES 56 B 805 ILE GLN PHE SER PRO SER ALA LYS LEU GLN GLU VAL LEU SEQRES 57 B 805 ASP TYR LEU THR ASN SER ALA SER LEU GLN MET LYS SER SEQRES 58 B 805 PRO ALA ILE THR ALA THR LEU GLU GLY LYS ASN ARG THR SEQRES 59 B 805 LEU TYR LEU GLN SER VAL THR SER ILE GLU GLU ARG THR SEQRES 60 B 805 ARG PRO ASN LEU SER LYS THR LEU LYS GLU LEU GLY LEU SEQRES 61 B 805 VAL ASP GLY GLN GLU LEU ALA VAL ALA ASP VAL THR THR SEQRES 62 B 805 PRO GLN THR VAL LEU PHE LYS LEU HIS PHE THR SER SEQRES 1 C 180 GLY SER MET ILE LYS LEU PHE SER LEU LYS GLN GLN LYS SEQRES 2 C 180 LYS GLU GLU GLU LYS GLY SER SER LYS LYS ALA SER ALA SEQRES 3 C 180 ALA GLN LEU ARG ILE GLN LYS ASP ILE ASN GLU LEU ASN SEQRES 4 C 180 LEU PRO LYS THR CYS ASP ILE SER PHE SER ASP PRO ASP SEQRES 5 C 180 ASP LEU LEU ASN PHE LYS LEU VAL ILE CYS PRO ASP GLU SEQRES 6 C 180 GLY PHE TYR LYS SER GLY LYS PHE VAL PHE SER PHE LYS SEQRES 7 C 180 VAL GLY GLN GLY TYR PRO HIS ASP PRO PRO LYS VAL LYS SEQRES 8 C 180 CYS GLU THR MET VAL TYR HIS PRO ASN ILE ASP LEU GLU SEQRES 9 C 180 GLY ASN VAL ALA LEU ASN ILE LEU ARG GLU ASP TRP LYS SEQRES 10 C 180 PRO VAL LEU THR ILE ASN SER ILE ILE TYR GLY LEU GLN SEQRES 11 C 180 TYR LEU PHE LEU GLU PRO ASN PRO GLU ASP PRO LEU ASN SEQRES 12 C 180 LYS GLU ALA ALA GLU VAL LEU GLN ASN ASN ARG ARG LEU SEQRES 13 C 180 PHE GLU GLN ASN VAL GLN ARG SER MET ARG GLY GLY TYR SEQRES 14 C 180 ILE GLY SER THR TYR PHE GLU ARG CYS LEU LYS SEQRES 1 I 81 GLY SER GLY GLY SER MET LEU ILE LYS VAL LYS THR LEU SEQRES 2 I 81 THR GLY LYS GLU ILE GLU ILE ASP ILE GLU PRO THR ASP SEQRES 3 I 81 LYS VAL GLU ARG ILE LYS GLU ARG VAL GLU GLU LYS GLU SEQRES 4 I 81 GLY ILE PRO PRO GLN GLN GLN ARG LEU ILE TYR SER GLY SEQRES 5 I 81 LYS GLN MET ASN ASP GLU LYS THR ALA ALA ASP TYR LYS SEQRES 6 I 81 ILE LEU GLY GLY SER VAL LEU HIS LEU VAL LEU ALA LEU SEQRES 7 I 81 ARG GLY GLY SEQRES 1 J 81 GLY SER GLY GLY SER MET LEU ILE LYS VAL LYS THR LEU SEQRES 2 J 81 THR GLY LYS GLU ILE GLU ILE ASP ILE GLU PRO THR ASP SEQRES 3 J 81 LYS VAL GLU ARG ILE LYS GLU ARG VAL GLU GLU LYS GLU SEQRES 4 J 81 GLY ILE PRO PRO GLN GLN GLN ARG LEU ILE TYR SER GLY SEQRES 5 J 81 LYS GLN MET ASN ASP GLU LYS THR ALA ALA ASP TYR LYS SEQRES 6 J 81 ILE LEU GLY GLY SER VAL LEU HIS LEU VAL LEU ALA LEU SEQRES 7 J 81 ARG GLY GLY HET MG B 101 1 HET ZN B 102 1 HET ATP B 103 31 HETNAM MG MAGNESIUM ION HETNAM ZN ZINC ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE FORMUL 6 MG MG 2+ FORMUL 7 ZN ZN 2+ FORMUL 8 ATP C10 H16 N5 O13 P3 FORMUL 9 HOH *45(H2 O) HELIX 1 1 LEU A 8 TYR A 13 1 6 HELIX 2 2 TYR A 13 SER A 30 1 18 HELIX 3 3 THR A 39 LEU A 51 1 13 HELIX 4 4 SER A 66 ASN A 72 1 7 HELIX 5 5 GLN A 77 ILE A 81 5 5 HELIX 6 6 ASN A 84 GLN A 94 1 11 HELIX 7 7 SER A 108 ASP A 116 1 9 HELIX 8 8 SER A 118 ARG A 122 5 5 HELIX 9 9 PRO A 132 SER A 146 1 15 HELIX 10 10 PHE A 189 SER A 198 1 10 HELIX 11 11 GLU A 205 HIS A 211 1 7 HELIX 12 12 PRO A 213 TYR A 226 1 14 HELIX 13 13 THR A 236 GLN A 249 1 14 HELIX 14 14 GLU A 262 LEU A 276 1 15 HELIX 15 15 PRO A 282 ASN A 290 1 9 HELIX 16 16 ASP A 291 ASN A 296 1 6 HELIX 17 17 PRO A 302 LYS A 317 1 16 HELIX 18 18 ASP A 335 ASN A 359 1 25 HELIX 19 19 VAL A 361 GLY A 369 1 9 HELIX 20 20 SER A 376 ASN A 386 1 11 HELIX 21 21 SER A 387 LEU A 390 5 4 HELIX 22 22 SER A 397 GLY A 403 1 7 HELIX 23 23 ASN A 408 MET A 416 1 9 HELIX 24 24 GLU A 422 GLN A 439 1 18 HELIX 25 25 SER A 446 TYR A 448 5 3 HELIX 26 26 GLN A 449 TYR A 468 1 20 HELIX 27 27 LYS A 475 GLY A 486 1 12 HELIX 28 28 PRO A 490 LYS A 511 1 22 HELIX 29 29 TYR B 1018 GLY B 1033 1 16 HELIX 30 30 LYS B 1043 THR B 1054 1 12 HELIX 31 31 HIS B 1065 GLY B 1075 1 11 HELIX 32 32 ASP B 1083 ASP B 1088 1 6 HELIX 33 33 PHE B 1093 VAL B 1098 1 6 HELIX 34 34 GLU B 1132 ALA B 1142 1 11 HELIX 35 35 GLU B 1154 ALA B 1164 1 11 HELIX 36 36 ASN B 1186 ASN B 1202 1 17 HELIX 37 37 ASP B 1210 ASN B 1219 1 10 HELIX 38 38 LYS B 1274 ASN B 1283 1 10 HELIX 39 39 THR B 1287 LYS B 1296 1 10 HELIX 40 40 LEU B 1305 GLU B 1310 1 6 HELIX 41 41 ALA B 1320 GLY B 1328 1 9 HELIX 42 42 GLN B 1336 SER B 1353 1 18 HELIX 43 43 THR B 1357 ALA B 1370 1 14 HELIX 44 44 TRP B 2017 ARG B 2026 1 10 HELIX 45 45 THR B 2039 THR B 2048 1 10 HELIX 46 46 GLY B 2058 LEU B 2069 1 12 HELIX 47 47 ASP B 2084 ARG B 2090 5 7 HELIX 48 48 ARG B 2095 ILE B 2099 5 5 HELIX 49 49 PRO B 2102 VAL B 2115 1 14 HELIX 50 50 LYS B 2126 PHE B 2130 5 5 HELIX 51 51 ASN B 2131 GLN B 2137 1 7 HELIX 52 52 SER B 2147 LEU B 2161 1 15 HELIX 53 53 PRO B 2171 ILE B 2174 5 4 HELIX 54 54 THR B 2203 TYR B 2207 5 5 HELIX 55 55 PRO B 2214 MET B 2221 1 8 HELIX 56 56 LEU B 2224 LEU B 2235 1 12 HELIX 57 57 LEU B 2235 GLN B 2241 1 7 HELIX 58 58 ASP B 2253 TYR B 2271 1 19 HELIX 59 59 THR B 2277 ARG B 2287 1 11 HELIX 60 60 VAL B 2292 SER B 2313 1 22 HELIX 61 61 LYS B 2360 SER B 2371 1 12 HELIX 62 62 VAL B 2397 ARG B 2405 1 9 HELIX 63 63 PRO B 2406 LYS B 2410 5 5 HELIX 64 64 SER C 28 GLU C 40 1 13 HELIX 65 65 GLU C 68 LYS C 72 5 5 HELIX 66 66 LEU C 112 ARG C 116 5 5 HELIX 67 67 THR C 124 GLU C 138 1 15 HELIX 68 68 ASN C 146 ASN C 156 1 11 HELIX 69 69 ASN C 156 GLY C 170 1 15 HELIX 70 70 LYS I 22 GLY I 35 1 14 HELIX 71 71 PRO I 37 GLN I 41 5 5 HELIX 72 72 VAL J 23 GLU J 31 1 9 HELIX 73 73 THR J 55 LYS J 60 5 6 SHEET 1 A 8 SER A 101 VAL A 105 0 SHEET 2 A 8 SER A 56 ILE A 60 1 N ILE A 59 O VAL A 105 SHEET 3 A 8 HIS A 32 ILE A 36 1 N LEU A 35 O THR A 58 SHEET 4 A 8 VAL A 125 THR A 129 1 O VAL A 127 N CYS A 34 SHEET 5 A 8 LEU A 150 TYR A 156 1 O CYS A 153 N ALA A 128 SHEET 6 A 8 VAL A 159 ILE A 165 -1 O ILE A 165 N LEU A 150 SHEET 7 A 8 THR A 519 SER A 523 -1 O TYR A 522 N GLY A 160 SHEET 8 A 8 THR A 528 PHE A 532 -1 O ALA A 530 N ILE A 521 SHEET 1 B 2 HIS A 169 VAL A 171 0 SHEET 2 B 2 ARG A 391 VAL A 393 -1 O VAL A 393 N HIS A 169 SHEET 1 C 5 VAL B1036 GLU B1039 0 SHEET 2 C 5 LEU B1008 TRP B1011 1 N ILE B1010 O GLU B1039 SHEET 3 C 5 ILE B1060 ALA B1064 1 O PHE B1062 N TRP B1011 SHEET 4 C 5 VAL B1260 ILE B1267 -1 O SER B1264 N TRP B1063 SHEET 5 C 5 ALA B1106 ALA B1113 -1 N ALA B1110 O LEU B1263 SHEET 1 D 2 ARG B1099 TYR B1100 0 SHEET 2 D 2 LYS B1103 LEU B1104 -1 O LYS B1103 N TYR B1100 SHEET 1 E 3 SER B1115 TYR B1118 0 SHEET 2 E 3 THR B1223 ASN B1228 -1 O THR B1226 N ILE B1117 SHEET 3 E 3 SER B1146 LEU B1148 1 N ALA B1147 O MET B1225 SHEET 1 F 2 TYR B1168 TYR B1172 0 SHEET 2 F 2 TYR B1177 GLY B1183 -1 O ASP B1178 N LYS B1171 SHEET 1 G 8 ASN B2119 PHE B2124 0 SHEET 2 G 8 GLN B2074 ASP B2079 1 N ILE B2075 O VAL B2121 SHEET 3 G 8 VAL B2051 ILE B2054 1 N VAL B2053 O HIS B2076 SHEET 4 G 8 ILE B2140 CYS B2143 1 O VAL B2142 N LEU B2052 SHEET 5 G 8 LEU B2177 GLU B2183 1 O ILE B2178 N CYS B2143 SHEET 6 G 8 LYS B2186 ILE B2192 -1 O ILE B2192 N LEU B2177 SHEET 7 G 8 TYR B2321 ASN B2325 -1 O PHE B2324 N GLY B2187 SHEET 8 G 8 TYR B2331 PHE B2335 -1 O TYR B2331 N ASN B2325 SHEET 1 H 2 TYR B2164 GLU B2165 0 SHEET 2 H 2 VAL B2168 LEU B2169 -1 O VAL B2168 N GLU B2165 SHEET 1 I 5 GLN B2351 PHE B2355 0 SHEET 2 I 5 VAL B2434 PHE B2440 1 O LYS B2437 N GLN B2351 SHEET 3 I 5 GLU B2422 ALA B2426 -1 N LEU B2423 O PHE B2436 SHEET 4 I 5 ALA B2380 LEU B2385 -1 N THR B2382 O ALA B2424 SHEET 5 I 5 LYS B2388 TYR B2393 -1 O TYR B2393 N ILE B2381 SHEET 1 J 4 CYS C 47 SER C 50 0 SHEET 2 J 4 ASN C 59 ILE C 64 -1 O LYS C 61 N SER C 50 SHEET 3 J 4 PHE C 76 LYS C 81 -1 O PHE C 78 N LEU C 62 SHEET 4 J 4 LYS C 92 CYS C 95 -1 O LYS C 94 N SER C 79 SHEET 1 K 2 GLY C 171 ILE C 173 0 SHEET 2 K 2 THR C 176 PHE C 178 -1 O PHE C 178 N GLY C 171 SHEET 1 L 5 GLU I 12 ASP I 16 0 SHEET 2 L 5 LEU I 2 LYS I 6 -1 N ILE I 3 O ILE I 15 SHEET 3 L 5 VAL I 66 LEU I 69 1 O LEU I 67 N LYS I 4 SHEET 4 L 5 LEU I 43 TYR I 45 -1 N ILE I 44 O HIS I 68 SHEET 5 L 5 LYS I 48 GLN I 49 -1 O LYS I 48 N TYR I 45 SHEET 1 M 4 LYS J 11 GLU J 14 0 SHEET 2 M 4 ILE J 3 THR J 7 -1 N THR J 7 O LYS J 11 SHEET 3 M 4 SER J 65 VAL J 70 1 O LEU J 67 N LYS J 6 SHEET 4 M 4 ARG J 42 ILE J 44 -1 N ARG J 42 O VAL J 70 LINK SG CYS B2216 C GLY J 76 1555 1555 1.85 LINK O HOH B 45 MG MG B 101 1555 1555 2.50 LINK MG MG B 101 O3G ATP B 103 1555 1555 2.40 LINK MG MG B 101 O2B ATP B 103 1555 1555 2.79 LINK MG MG B 101 OD2 ASP B2146 1555 1555 2.16 LINK ZN ZN B 102 SG CYS B2199 1555 1555 2.35 LINK ZN ZN B 102 SG CYS B2202 1555 1555 2.47 LINK ZN ZN B 102 SG CYS B2343 1555 1555 2.40 LINK ZN ZN B 102 SG CYS B2346 1555 1555 2.27 CISPEP 1 TYR C 86 PRO C 87 0 1.17 SITE 1 AC1 3 HOH B 45 ATP B 103 ASP B2146 SITE 1 AC2 4 CYS B2199 CYS B2202 CYS B2343 CYS B2346 SITE 1 AC3 22 ARG A 15 HOH B 5 HOH B 31 HOH B 40 SITE 2 AC3 22 HOH B 45 MG B 101 ALA B2056 GLY B2057 SITE 3 AC3 22 ASP B2079 MET B2080 ASP B2081 ASN B2087 SITE 4 AC3 22 ARG B2090 GLN B2091 LYS B2103 ASN B2125 SITE 5 AC3 22 LYS B2126 ILE B2127 GLN B2128 GLY B2144 SITE 6 AC3 22 ASP B2146 GLY I 76 CRYST1 156.494 156.494 190.485 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006390 0.003689 0.000000 0.00000 SCALE2 0.000000 0.007379 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005250 0.00000