HEADER TRANSLATION 06-OCT-06 2J76 TITLE SOLUTION STRUCTURE AND RNA INTERACTIONS OF THE RNA RECOGNITION MOTIF TITLE 2 FROM EUKARYOTIC TRANSLATION INITIATION FACTOR 4B COMPND MOL_ID: 1; COMPND 2 MOLECULE: EUKARYOTIC TRANSLATION INITIATION FACTOR 4B; COMPND 3 CHAIN: E; COMPND 4 FRAGMENT: RRM, RESIDUES 87-176; COMPND 5 SYNONYM: EIF-4B, EIF4B; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS PROTEIN BIOSYNTHESIS, RNA RECOGNITION MOTIF, INITIATION FACTOR, RNA KEYWDS 2 BINDING DOMAIN, TRANSLATION, RRM, RBD, RNP, RNA-BINDING, KEYWDS 3 PHOSPHORYLATION EXPDTA SOLUTION NMR MDLTYP MINIMIZED AVERAGE AUTHOR K.FLEMING,J.GHUMAN,X.M.YUAN,P.SIMPSON,A.SZENDROI,S.MATTHEWS,S.CURRY REVDAT 3 19-APR-17 2J76 1 REMARK REVDAT 2 24-FEB-09 2J76 1 VERSN REVDAT 1 28-OCT-08 2J76 0 JRNL AUTH K.FLEMING,J.GHUMAN,X.M.YUAN,P.SIMPSON,A.SZENDROI,S.MATTHEWS, JRNL AUTH 2 S.CURRY JRNL TITL SOLUTION STRUCTURE AND RNA INTERACTIONS OF THE RNA JRNL TITL 2 RECOGNITION MOTIF FROM EUKARYOTIC TRANSLATION INITIATION JRNL TITL 3 FACTOR 4B. JRNL REF BIOCHEMISTRY V. 42 8966 2003 JRNL REFN ISSN 0006-2960 JRNL PMID 12885229 JRNL DOI 10.1021/BI034506G REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS, GROSSE- REMARK 3 KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ, RICE, REMARK 3 SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINED WITH RDC MEASUREMENTS REMARK 4 REMARK 4 2J76 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-OCT-06. REMARK 100 THE PDBE ID CODE IS EBI-30176. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310.0 REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NONE REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 RES C SSSEQI REMARK 465 MET E -18 REMARK 465 ARG E -17 REMARK 465 GLY E -16 REMARK 465 SER E -15 REMARK 465 HIS E -14 REMARK 465 HIS E -13 REMARK 465 HIS E -12 REMARK 465 HIS E -11 REMARK 465 HIS E -10 REMARK 465 HIS E -9 REMARK 465 ARG E -8 REMARK 465 SER E -7 REMARK 465 ARG E -6 REMARK 465 LEU E -5 REMARK 465 PRO E -4 REMARK 465 LYS E -3 REMARK 465 SER E -2 REMARK 465 PRO E -1 REMARK 465 PRO E 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP E 51 H LEU E 55 0.74 REMARK 500 HA THR E 13 HG12 ILE E 17 1.08 REMARK 500 H GLY E 6 H ARG E 72 1.19 REMARK 500 HA LEU E 5 O ARG E 72 1.37 REMARK 500 O SER E 54 H ALA E 58 1.45 REMARK 500 H ARG E 30 O TYR E 46 1.52 REMARK 500 O ASP E 51 N LEU E 55 1.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR E 10 -33.28 176.94 REMARK 500 VAL E 12 -105.59 -97.15 REMARK 500 GLU E 14 94.33 77.77 REMARK 500 GLU E 15 -41.50 79.42 REMARK 500 ARG E 22 -145.04 168.49 REMARK 500 PRO E 32 -1.43 -53.70 REMARK 500 ASN E 37 -48.40 -177.94 REMARK 500 GLU E 39 77.01 69.75 REMARK 500 LYS E 42 -149.80 -131.28 REMARK 500 PHE E 44 104.51 148.86 REMARK 500 ASP E 51 -57.24 73.64 REMARK 500 LEU E 52 -76.62 -23.95 REMARK 500 ASN E 62 -175.96 -57.12 REMARK 500 GLU E 63 16.24 46.49 REMARK 500 ASN E 68 24.16 -158.28 REMARK 500 ASP E 77 -172.00 38.26 REMARK 500 GLN E 78 108.10 -167.16 REMARK 500 ALA E 79 -79.61 62.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1WI8 RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF THE RNA BINDING DOMAIN OF EUKARYOTIC REMARK 900 INITIATION FACTOR 4B DBREF 2J76 E -18 -9 UNP P23588 IF4B_HUMAN 77 86 DBREF 2J76 E -8 81 UNP P23588 IF4B_HUMAN 87 176 SEQRES 1 E 100 MET ARG GLY SER HIS HIS HIS HIS HIS HIS ARG SER ARG SEQRES 2 E 100 LEU PRO LYS SER PRO PRO TYR THR ALA PHE LEU GLY ASN SEQRES 3 E 100 LEU PRO TYR ASP VAL THR GLU GLU SER ILE LYS GLU PHE SEQRES 4 E 100 PHE ARG GLY LEU ASN ILE SER ALA VAL ARG LEU PRO ARG SEQRES 5 E 100 GLU PRO SER ASN PRO GLU ARG LEU LYS GLY PHE GLY TYR SEQRES 6 E 100 ALA GLU PHE GLU ASP LEU ASP SER LEU LEU SER ALA LEU SEQRES 7 E 100 SER LEU ASN GLU GLU SER LEU GLY ASN ARG ARG ILE ARG SEQRES 8 E 100 VAL ASP VAL ALA ASP GLN ALA GLN ASP HELIX 1 1 GLU E 15 PHE E 21 1 7 HELIX 2 2 ASP E 51 LEU E 61 1 11 SHEET 1 EA 4 ILE E 26 ARG E 30 0 SHEET 2 EA 4 GLY E 45 PHE E 49 -1 O TYR E 46 N ARG E 30 SHEET 3 EA 4 THR E 2 LEU E 5 -1 O ALA E 3 N ALA E 47 SHEET 4 EA 4 ASP E 74 VAL E 75 -1 O ASP E 74 N PHE E 4 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000