HEADER RNA BINDING PROTEIN 20-NOV-06 2E36 TITLE L11 WITH SANS REFINEMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: 50S RIBOSOMAL PROTEIN L11; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS L11, SANS, RNA BINDING PROTEIN EXPDTA SOLUTION NMR MDLTYP MINIMIZED AVERAGE AUTHOR D.LEE,J.D.WALSH,P.YU,M.A.MARKUS,T.CHOLI-PAPADOPOULOUS,C.D.SCHWIETERS, AUTHOR 2 S.KRUEGER,D.E.DRAPER,Y.X.WANG REVDAT 3 09-MAR-22 2E36 1 REMARK REVDAT 2 24-FEB-09 2E36 1 VERSN REVDAT 1 19-JUN-07 2E36 0 JRNL AUTH D.LEE,J.D.WALSH,P.YU,M.A.MARKUS,T.CHOLI-PAPADOPOULOU, JRNL AUTH 2 C.D.SCHWIETERS,S.KRUEGER,D.E.DRAPER,Y.X.WANG JRNL TITL THE STRUCTURE OF FREE L11 AND FUNCTIONAL DYNAMICS OF L11 IN JRNL TITL 2 FREE, L11-RRNA(58 NT) BINARY AND L11-RRNA(58 JRNL TITL 3 NT)-THIOSTREPTON TERNARY COMPLEXES JRNL REF J.MOL.BIOL. V. 367 1007 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17292917 JRNL DOI 10.1016/J.JMB.2007.01.013 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2E36 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-NOV-06. REMARK 100 THE DEPOSITION ID IS D_1000026166. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, SANS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO A 73 H TYR A 76 1.29 REMARK 500 O MET A 35 H LYS A 39 1.32 REMARK 500 H ALA A 14 O ALA A 51 1.34 REMARK 500 O ALA A 61 H ARG A 63 1.35 REMARK 500 O ILE A 99 H VAL A 139 1.41 REMARK 500 O LEU A 120 H ALA A 124 1.49 REMARK 500 O ALA A 108 H LYS A 111 1.51 REMARK 500 H TYR A 60 O SER A 64 1.52 REMARK 500 O THR A 18 H ALA A 20 1.53 REMARK 500 O ILE A 78 H ALA A 82 1.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 3 82.73 -175.90 REMARK 500 VAL A 4 145.76 -38.38 REMARK 500 LYS A 16 -21.09 -176.85 REMARK 500 PRO A 19 16.70 -51.44 REMARK 500 PRO A 22 -6.91 -59.90 REMARK 500 ALA A 32 57.58 79.37 REMARK 500 PHE A 41 -72.07 -47.56 REMARK 500 MET A 48 -77.93 -86.49 REMARK 500 ALA A 51 -158.63 168.72 REMARK 500 PRO A 54 85.84 -68.47 REMARK 500 ILE A 57 97.18 -57.91 REMARK 500 ASP A 62 43.63 -62.45 REMARK 500 ARG A 63 49.70 36.49 REMARK 500 PHE A 67 119.67 -172.00 REMARK 500 LYS A 70 -73.15 -151.02 REMARK 500 PRO A 72 162.23 -32.46 REMARK 500 PRO A 73 -109.19 -36.10 REMARK 500 ALA A 74 -48.94 -14.35 REMARK 500 ARG A 79 -72.01 -54.85 REMARK 500 ALA A 82 -74.98 -81.22 REMARK 500 LEU A 84 74.98 -63.71 REMARK 500 GLU A 85 -101.66 -86.01 REMARK 500 ALA A 88 134.25 65.10 REMARK 500 ARG A 93 -87.88 32.01 REMARK 500 GLU A 94 170.23 -42.71 REMARK 500 MET A 112 39.86 -157.46 REMARK 500 ASP A 114 10.16 158.98 REMARK 500 LEU A 115 -104.82 -52.82 REMARK 500 THR A 117 -145.22 -78.27 REMARK 500 THR A 118 -69.75 167.67 REMARK 500 ALA A 122 -71.98 -60.99 REMARK 500 ILE A 127 -71.26 -83.63 REMARK 500 MET A 134 30.71 -66.14 REMARK 500 ALA A 141 65.21 36.05 REMARK 500 PRO A 142 105.19 -57.25 REMARK 500 GLU A 143 93.39 -38.45 REMARK 500 LYS A 145 -112.39 -116.20 REMARK 500 ASP A 146 -4.93 -55.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2E34 RELATED DB: PDB REMARK 900 RELATED ID: 2E35 RELATED DB: PDB DBREF 2E36 A 1 147 UNP P36238 RL11_THETH 1 147 SEQRES 1 A 147 MET LYS LYS VAL VAL ALA VAL VAL LYS LEU GLN LEU PRO SEQRES 2 A 147 ALA GLY LYS ALA THR PRO ALA PRO PRO VAL GLY PRO ALA SEQRES 3 A 147 LEU GLY GLN HIS GLY ALA ASN ILE MET GLU PHE VAL LYS SEQRES 4 A 147 ALA PHE ASN ALA ALA THR ALA ASN MET GLY ASP ALA ILE SEQRES 5 A 147 VAL PRO VAL GLU ILE THR ILE TYR ALA ASP ARG SER PHE SEQRES 6 A 147 THR PHE VAL THR LYS THR PRO PRO ALA SER TYR LEU ILE SEQRES 7 A 147 ARG LYS ALA ALA GLY LEU GLU LYS GLY ALA HIS LYS PRO SEQRES 8 A 147 GLY ARG GLU LYS VAL GLY ARG ILE THR TRP GLU GLN VAL SEQRES 9 A 147 LEU GLU ILE ALA LYS GLN LYS MET PRO ASP LEU ASN THR SEQRES 10 A 147 THR ASP LEU GLU ALA ALA ALA ARG MET ILE ALA GLY SER SEQRES 11 A 147 ALA ARG SER MET GLY VAL GLU VAL VAL GLY ALA PRO GLU SEQRES 12 A 147 VAL LYS ASP ALA HELIX 1 1 VAL A 23 LEU A 27 5 5 HELIX 2 2 ASN A 33 MET A 48 1 16 HELIX 3 3 ALA A 74 GLY A 83 1 10 HELIX 4 4 THR A 100 GLN A 110 1 11 HELIX 5 5 ASP A 119 MET A 134 1 16 SHEET 1 A 3 ALA A 6 ALA A 14 0 SHEET 2 A 3 ALA A 51 TYR A 60 -1 O ALA A 51 N ALA A 14 SHEET 3 A 3 SER A 64 THR A 66 -1 O SER A 64 N TYR A 60 SHEET 1 B 2 ARG A 98 ILE A 99 0 SHEET 2 B 2 GLU A 137 VAL A 138 1 O GLU A 137 N ILE A 99 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000