HEADER TRANSPORT PROTEIN, STRUCTURAL PROTEIN 07-MAY-02 1LOT TITLE CRYSTAL STRUCTURE OF THE COMPLEX OF ACTIN WITH VITAMIN D-BINDING TITLE 2 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: VITAMIN D-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DBP, GROUP-SPECIFIC COMPONENT, GC-GLOBULIN, VDB; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ACTIN, ALPHA SKELETAL MUSCLE; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: ALPHA-ACTIN 1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 7 ORGANISM_COMMON: RABBIT; SOURCE 8 ORGANISM_TAXID: 9986 KEYWDS TRANSPORT PROTEIN, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.F.HEAD,N.SWAMY,R.RAY REVDAT 4 13-JUL-11 1LOT 1 VERSN REVDAT 3 09-MAR-11 1LOT 1 REMARK REVDAT 2 24-FEB-09 1LOT 1 VERSN REVDAT 1 31-JUL-02 1LOT 0 JRNL AUTH J.F.HEAD,N.SWAMY,R.RAY JRNL TITL CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN ACTIN AND HUMAN JRNL TITL 2 VITAMIN D-BINDING PROTEIN AT 2.5 A RESOLUTION. JRNL REF BIOCHEMISTRY V. 41 9015 2002 JRNL REFN ISSN 0006-2960 JRNL PMID 12119014 JRNL DOI 10.1021/BI026054Y REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 37865 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3082 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6232 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 68 REMARK 3 SOLVENT ATOMS : 87 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM SIGMAA (A) : 0.37 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.41 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.46 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.28 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.94 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1LOT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAY-02. REMARK 100 THE RCSB ID CODE IS RCSB016144. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X8C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39295 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 12.000 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.31000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRIES 1ATN AND 1J78 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG8000, CACODYLATE, CALCIUM ACETATE, REMARK 280 GLYCEROL, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 40.08550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.79200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.67050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 79.79200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.08550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.67050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 91 REMARK 465 THR A 92 REMARK 465 ALA A 93 REMARK 465 GLU A 94 REMARK 465 CYS A 95 REMARK 465 CYS A 96 REMARK 465 THR A 97 REMARK 465 LYS A 98 REMARK 465 GLU A 99 REMARK 465 GLY A 100 REMARK 465 LEU A 101 REMARK 465 GLU A 102 REMARK 465 ARG A 103 REMARK 465 LYS A 104 REMARK 465 LEU A 105 REMARK 465 CYS A 106 REMARK 465 MET A 107 REMARK 465 ALA A 108 REMARK 465 ALA A 109 REMARK 465 LEU A 110 REMARK 465 LYS A 111 REMARK 465 LEU A 458 REMARK 465 ASP B 1 REMARK 465 GLU B 2 REMARK 465 HIS B 40 REMARK 465 GLN B 41 REMARK 465 GLY B 42 REMARK 465 VAL B 43 REMARK 465 MET B 44 REMARK 465 VAL B 45 REMARK 465 GLY B 46 REMARK 465 MET B 47 REMARK 465 GLY B 48 REMARK 465 GLN B 49 REMARK 465 LYS B 50 REMARK 465 CYS B 374 REMARK 465 PHE B 375 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 3 3.72 -48.40 REMARK 500 ARG A 5 -14.30 75.40 REMARK 500 CYS A 67 -71.40 -52.69 REMARK 500 ASP A 361 -77.25 -68.15 REMARK 500 ASP A 364 91.99 70.64 REMARK 500 SER A 365 -71.67 -70.56 REMARK 500 THR A 366 85.01 -63.06 REMARK 500 THR A 367 -59.95 177.17 REMARK 500 ALA A 392 -97.89 -3.65 REMARK 500 ASN A 456 51.40 -96.22 REMARK 500 THR B 5 -66.86 157.93 REMARK 500 THR B 6 103.52 69.25 REMARK 500 PRO B 38 97.95 -51.61 REMARK 500 LYS B 61 38.60 -82.02 REMARK 500 HIC B 73 52.23 -118.28 REMARK 500 ASN B 128 62.26 37.09 REMARK 500 VAL B 201 -32.56 -141.27 REMARK 500 SER B 233 -147.74 -145.78 REMARK 500 SER B 234 -135.29 -107.95 REMARK 500 SER B 235 -28.75 71.67 REMARK 500 PRO B 264 -9.57 -51.79 REMARK 500 ASN B 296 56.68 -141.45 REMARK 500 ALA B 365 -6.79 -146.54 REMARK 500 PRO B 367 -159.98 -59.56 REMARK 500 SER B 368 -16.27 64.57 REMARK 500 ARG B 372 -2.91 -166.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 CYS A 67 23.8 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 550 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 658 O REMARK 620 2 HOH B 653 O 152.4 REMARK 620 3 ATP B 500 O2B 82.4 87.2 REMARK 620 4 HOH B 652 O 95.9 96.6 174.5 REMARK 620 5 HOH B 655 O 69.9 82.9 77.2 107.2 REMARK 620 6 HOH B 666 O 55.8 149.9 89.4 85.4 125.3 REMARK 620 7 ATP B 500 O2G 122.5 77.9 73.1 103.8 145.2 72.4 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 550 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 620 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 630 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 640 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 650 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ATN RELATED DB: PDB REMARK 900 ATOMIC STRUCTURE OF THE ACTIN: DNASE I COMPLEX REMARK 900 RELATED ID: 1J78 RELATED DB: PDB REMARK 900 CRYSTALLOGRAPHIC ANALYSIS OF THE HUMAN VITAMIN D BINDING REMARK 900 PROTEIN REMARK 900 RELATED ID: 1J6Z RELATED DB: PDB REMARK 900 UNCOMPLEXED ACTIN REMARK 999 REMARK 999 SEQUENCE AUTHOR STATES THE CONFLICT IS A VARIANT OF THE REFERENCE REMARK 999 DATABASE SEQUENCE SWISS-PROT: P02774 DBREF 1LOT A 1 458 UNP P02774 VTDB_HUMAN 17 474 DBREF 1LOT B 1 375 UNP P68135 ACTS_RABIT 3 377 SEQADV 1LOT THR A 420 UNP P02774 LYS 436 SEE REMARK 999 SEQRES 1 A 458 LEU GLU ARG GLY ARG ASP TYR GLU LYS ASN LYS VAL CYS SEQRES 2 A 458 LYS GLU PHE SER HIS LEU GLY LYS GLU ASP PHE THR SER SEQRES 3 A 458 LEU SER LEU VAL LEU TYR SER ARG LYS PHE PRO SER GLY SEQRES 4 A 458 THR PHE GLU GLN VAL SER GLN LEU VAL LYS GLU VAL VAL SEQRES 5 A 458 SER LEU THR GLU ALA CYS CYS ALA GLU GLY ALA ASP PRO SEQRES 6 A 458 ASP CYS TYR ASP THR ARG THR SER ALA LEU SER ALA LYS SEQRES 7 A 458 SER CYS GLU SER ASN SER PRO PHE PRO VAL HIS PRO GLY SEQRES 8 A 458 THR ALA GLU CYS CYS THR LYS GLU GLY LEU GLU ARG LYS SEQRES 9 A 458 LEU CYS MET ALA ALA LEU LYS HIS GLN PRO GLN GLU PHE SEQRES 10 A 458 PRO THR TYR VAL GLU PRO THR ASN ASP GLU ILE CYS GLU SEQRES 11 A 458 ALA PHE ARG LYS ASP PRO LYS GLU TYR ALA ASN GLN PHE SEQRES 12 A 458 MET TRP GLU TYR SER THR ASN TYR GLY GLN ALA PRO LEU SEQRES 13 A 458 SER LEU LEU VAL SER TYR THR LYS SER TYR LEU SER MET SEQRES 14 A 458 VAL GLY SER CYS CYS THR SER ALA SER PRO THR VAL CYS SEQRES 15 A 458 PHE LEU LYS GLU ARG LEU GLN LEU LYS HIS LEU SER LEU SEQRES 16 A 458 LEU THR THR LEU SER ASN ARG VAL CYS SER GLN TYR ALA SEQRES 17 A 458 ALA TYR GLY GLU LYS LYS SER ARG LEU SER ASN LEU ILE SEQRES 18 A 458 LYS LEU ALA GLN LYS VAL PRO THR ALA ASP LEU GLU ASP SEQRES 19 A 458 VAL LEU PRO LEU ALA GLU ASP ILE THR ASN ILE LEU SER SEQRES 20 A 458 LYS CYS CYS GLU SER ALA SER GLU ASP CYS MET ALA LYS SEQRES 21 A 458 GLU LEU PRO GLU HIS THR VAL LYS LEU CYS ASP ASN LEU SEQRES 22 A 458 SER THR LYS ASN SER LYS PHE GLU ASP CYS CYS GLN GLU SEQRES 23 A 458 LYS THR ALA MET ASP VAL PHE VAL CYS THR TYR PHE MET SEQRES 24 A 458 PRO ALA ALA GLN LEU PRO GLU LEU PRO ASP VAL GLU LEU SEQRES 25 A 458 PRO THR ASN LYS ASP VAL CYS ASP PRO GLY ASN THR LYS SEQRES 26 A 458 VAL MET ASP LYS TYR THR PHE GLU LEU SER ARG ARG THR SEQRES 27 A 458 HIS LEU PRO GLU VAL PHE LEU SER LYS VAL LEU GLU PRO SEQRES 28 A 458 THR LEU LYS SER LEU GLY GLU CYS CYS ASP VAL GLU ASP SEQRES 29 A 458 SER THR THR CYS PHE ASN ALA LYS GLY PRO LEU LEU LYS SEQRES 30 A 458 LYS GLU LEU SER SER PHE ILE ASP LYS GLY GLN GLU LEU SEQRES 31 A 458 CYS ALA ASP TYR SER GLU ASN THR PHE THR GLU TYR LYS SEQRES 32 A 458 LYS LYS LEU ALA GLU ARG LEU LYS ALA LYS LEU PRO ASP SEQRES 33 A 458 ALA THR PRO THR GLU LEU ALA LYS LEU VAL ASN LYS ARG SEQRES 34 A 458 SER ASP PHE ALA SER ASN CYS CYS SER ILE ASN SER PRO SEQRES 35 A 458 PRO LEU TYR CYS ASP SER GLU ILE ASP ALA GLU LEU LYS SEQRES 36 A 458 ASN ILE LEU SEQRES 1 B 375 ASP GLU ASP GLU THR THR ALA LEU VAL CYS ASP ASN GLY SEQRES 2 B 375 SER GLY LEU VAL LYS ALA GLY PHE ALA GLY ASP ASP ALA SEQRES 3 B 375 PRO ARG ALA VAL PHE PRO SER ILE VAL GLY ARG PRO ARG SEQRES 4 B 375 HIS GLN GLY VAL MET VAL GLY MET GLY GLN LYS ASP SER SEQRES 5 B 375 TYR VAL GLY ASP GLU ALA GLN SER LYS ARG GLY ILE LEU SEQRES 6 B 375 THR LEU LYS TYR PRO ILE GLU HIC GLY ILE ILE THR ASN SEQRES 7 B 375 TRP ASP ASP MET GLU LYS ILE TRP HIS HIS THR PHE TYR SEQRES 8 B 375 ASN GLU LEU ARG VAL ALA PRO GLU GLU HIS PRO THR LEU SEQRES 9 B 375 LEU THR GLU ALA PRO LEU ASN PRO LYS ALA ASN ARG GLU SEQRES 10 B 375 LYS MET THR GLN ILE MET PHE GLU THR PHE ASN VAL PRO SEQRES 11 B 375 ALA MET TYR VAL ALA ILE GLN ALA VAL LEU SER LEU TYR SEQRES 12 B 375 ALA SER GLY ARG THR THR GLY ILE VAL LEU ASP SER GLY SEQRES 13 B 375 ASP GLY VAL THR HIS ASN VAL PRO ILE TYR GLU GLY TYR SEQRES 14 B 375 ALA LEU PRO HIS ALA ILE MET ARG LEU ASP LEU ALA GLY SEQRES 15 B 375 ARG ASP LEU THR ASP TYR LEU MET LYS ILE LEU THR GLU SEQRES 16 B 375 ARG GLY TYR SER PHE VAL THR THR ALA GLU ARG GLU ILE SEQRES 17 B 375 VAL ARG ASP ILE LYS GLU LYS LEU CYS TYR VAL ALA LEU SEQRES 18 B 375 ASP PHE GLU ASN GLU MET ALA THR ALA ALA SER SER SER SEQRES 19 B 375 SER LEU GLU LYS SER TYR GLU LEU PRO ASP GLY GLN VAL SEQRES 20 B 375 ILE THR ILE GLY ASN GLU ARG PHE ARG CYS PRO GLU THR SEQRES 21 B 375 LEU PHE GLN PRO SER PHE ILE GLY MET GLU SER ALA GLY SEQRES 22 B 375 ILE HIS GLU THR THR TYR ASN SER ILE MET LYS CYS ASP SEQRES 23 B 375 ILE ASP ILE ARG LYS ASP LEU TYR ALA ASN ASN VAL MET SEQRES 24 B 375 SER GLY GLY THR THR MET TYR PRO GLY ILE ALA ASP ARG SEQRES 25 B 375 MET GLN LYS GLU ILE THR ALA LEU ALA PRO SER THR MET SEQRES 26 B 375 LYS ILE LYS ILE ILE ALA PRO PRO GLU ARG LYS TYR SER SEQRES 27 B 375 VAL TRP ILE GLY GLY SER ILE LEU ALA SER LEU SER THR SEQRES 28 B 375 PHE GLN GLN MET TRP ILE THR LYS GLN GLU TYR ASP GLU SEQRES 29 B 375 ALA GLY PRO SER ILE VAL HIS ARG LYS CYS PHE MODRES 1LOT HIC B 73 HIS 4-METHYL-HISTIDINE HET HIC B 73 11 HET CA B 550 1 HET ATP B 500 31 HET GOL A 600 6 HET GOL A 610 6 HET GOL B 620 6 HET GOL A 630 6 HET GOL B 640 6 HET GOL B 650 6 HETNAM HIC 4-METHYL-HISTIDINE HETNAM CA CALCIUM ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 HIC C7 H11 N3 O2 FORMUL 3 CA CA 2+ FORMUL 4 ATP C10 H16 N5 O13 P3 FORMUL 5 GOL 6(C3 H8 O3) FORMUL 11 HOH *87(H2 O) HELIX 1 1 ASP A 6 GLY A 20 1 15 HELIX 2 2 GLY A 20 PHE A 36 1 17 HELIX 3 3 THR A 40 CYS A 59 1 20 HELIX 4 4 ASP A 66 SER A 79 1 14 HELIX 5 5 THR A 124 ASP A 135 1 12 HELIX 6 6 ASP A 135 TYR A 151 1 17 HELIX 7 7 PRO A 155 CYS A 174 1 20 HELIX 8 8 SER A 178 VAL A 227 1 50 HELIX 9 9 ASP A 231 CYS A 250 1 20 HELIX 10 10 ASP A 256 SER A 274 1 19 HELIX 11 11 ASN A 277 CYS A 284 1 8 HELIX 12 12 THR A 288 MET A 299 1 12 HELIX 13 13 THR A 314 ASP A 320 1 7 HELIX 14 14 ASN A 323 ARG A 336 1 14 HELIX 15 15 PRO A 341 VAL A 362 1 22 HELIX 16 16 ASP A 364 CYS A 391 1 28 HELIX 17 17 THR A 398 ALA A 412 1 15 HELIX 18 18 THR A 418 CYS A 437 1 20 HELIX 19 19 PRO A 442 LYS A 455 1 14 HELIX 20 20 GLY B 55 LYS B 61 1 7 HELIX 21 21 ASN B 78 ASN B 92 1 15 HELIX 22 22 ALA B 97 HIS B 101 5 5 HELIX 23 23 PRO B 112 ASN B 128 1 17 HELIX 24 24 GLN B 137 ALA B 144 1 8 HELIX 25 25 PRO B 172 ILE B 175 5 4 HELIX 26 26 ALA B 181 ARG B 196 1 16 HELIX 27 27 THR B 202 CYS B 217 1 16 HELIX 28 28 ASP B 222 SER B 233 1 12 HELIX 29 29 ASN B 252 THR B 260 1 9 HELIX 30 30 LEU B 261 PHE B 262 5 2 HELIX 31 31 GLN B 263 GLY B 268 5 6 HELIX 32 32 GLY B 273 LYS B 284 1 12 HELIX 33 33 ASP B 286 ALA B 295 1 10 HELIX 34 34 GLY B 301 MET B 305 5 5 HELIX 35 35 GLY B 308 ALA B 319 1 12 HELIX 36 36 GLU B 334 LYS B 336 5 3 HELIX 37 37 TYR B 337 SER B 348 1 12 HELIX 38 38 PHE B 352 TRP B 356 5 5 HELIX 39 39 LYS B 359 GLU B 364 1 6 SHEET 1 A 6 ALA B 29 PRO B 32 0 SHEET 2 A 6 LEU B 16 PHE B 21 -1 N VAL B 17 O PHE B 31 SHEET 3 A 6 LEU B 8 ASP B 11 -1 N ASP B 11 O LYS B 18 SHEET 4 A 6 THR B 103 GLU B 107 1 O LEU B 104 N LEU B 8 SHEET 5 A 6 ALA B 131 ILE B 136 1 O TYR B 133 N LEU B 105 SHEET 6 A 6 ILE B 357 THR B 358 -1 O ILE B 357 N MET B 132 SHEET 1 B 3 TYR B 53 VAL B 54 0 SHEET 2 B 3 VAL B 35 PRO B 38 -1 N GLY B 36 O TYR B 53 SHEET 3 B 3 LEU B 65 LYS B 68 -1 O THR B 66 N ARG B 37 SHEET 1 C 5 ILE B 329 ILE B 330 0 SHEET 2 C 5 ASN B 297 SER B 300 1 N ASN B 297 O ILE B 330 SHEET 3 C 5 GLY B 150 SER B 155 1 N LEU B 153 O VAL B 298 SHEET 4 C 5 THR B 160 TYR B 166 -1 O HIS B 161 N ASP B 154 SHEET 5 C 5 TYR B 169 ALA B 170 -1 O TYR B 169 N TYR B 166 SHEET 1 D 5 ILE B 329 ILE B 330 0 SHEET 2 D 5 ASN B 297 SER B 300 1 N ASN B 297 O ILE B 330 SHEET 3 D 5 GLY B 150 SER B 155 1 N LEU B 153 O VAL B 298 SHEET 4 D 5 THR B 160 TYR B 166 -1 O HIS B 161 N ASP B 154 SHEET 5 D 5 MET B 176 LEU B 178 -1 O LEU B 178 N THR B 160 SHEET 1 E 2 LYS B 238 GLU B 241 0 SHEET 2 E 2 VAL B 247 ILE B 250 -1 O ILE B 248 N TYR B 240 SSBOND 1 CYS A 13 CYS A 59 1555 1555 2.03 SSBOND 2 CYS A 58 CYS A 67 1555 1555 2.02 SSBOND 3 CYS A 129 CYS A 174 1555 1555 2.03 SSBOND 4 CYS A 173 CYS A 182 1555 1555 2.06 SSBOND 5 CYS A 204 CYS A 250 1555 1555 2.03 SSBOND 6 CYS A 249 CYS A 257 1555 1555 2.04 SSBOND 7 CYS A 270 CYS A 284 1555 1555 2.04 SSBOND 8 CYS A 283 CYS A 295 1555 1555 2.04 SSBOND 9 CYS A 319 CYS A 360 1555 1555 2.03 SSBOND 10 CYS A 391 CYS A 437 1555 1555 2.04 SSBOND 11 CYS A 436 CYS A 446 1555 1555 2.05 LINK C GLU B 72 N HIC B 73 1555 1555 1.33 LINK C HIC B 73 N GLY B 74 1555 1555 1.33 LINK CA CA B 550 O HOH B 658 1555 1555 2.72 LINK CA CA B 550 O HOH B 653 1555 1555 2.49 LINK CA CA B 550 O2B ATP B 500 1555 1555 2.47 LINK CA CA B 550 O HOH B 652 1555 1555 2.15 LINK CA CA B 550 O HOH B 655 1555 1555 2.26 LINK CA CA B 550 O HOH B 666 1555 1555 3.07 LINK CA CA B 550 O2G ATP B 500 1555 1555 2.63 SITE 1 AC1 6 ATP B 500 HOH B 652 HOH B 653 HOH B 655 SITE 2 AC1 6 HOH B 658 HOH B 666 SITE 1 AC2 25 GLY B 13 SER B 14 GLY B 15 LEU B 16 SITE 2 AC2 25 LYS B 18 GLY B 156 ASP B 157 GLY B 158 SITE 3 AC2 25 VAL B 159 GLY B 182 LYS B 213 GLU B 214 SITE 4 AC2 25 GLY B 301 GLY B 302 THR B 303 MET B 305 SITE 5 AC2 25 TYR B 306 LYS B 336 CA B 550 HOH B 651 SITE 6 AC2 25 HOH B 653 HOH B 655 HOH B 661 HOH B 666 SITE 7 AC2 25 HOH B 693 SITE 1 AC3 3 GLU A 186 GLN A 189 GLU B 241 SITE 1 AC4 3 ASP A 309 ILE A 384 ASP A 385 SITE 1 AC5 4 ARG A 133 VAL B 30 ASP B 56 GLU B 93 SITE 1 AC6 8 TYR A 394 ASN A 397 THR A 398 PHE A 399 SITE 2 AC6 8 ASN B 280 MET B 283 LYS B 284 HOH B 685 SITE 1 AC7 3 ASP B 179 ASP B 184 MET B 269 SITE 1 AC8 3 GLY B 23 ASP B 25 HOH B 687 CRYST1 80.171 87.341 159.584 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012473 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011449 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006266 0.00000