HEADER COMPLEX (MOLECULAR CHAPERONE/PEPTIDE) 03-JUN-96 1DKY TITLE THE SUBSTRATE BINDING DOMAIN OF DNAK IN COMPLEX WITH A TITLE 2 SUBSTRATE PEPTIDE, DETERMINED FROM TYPE 2 NATIVE CRYSTALS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNAK; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SUBSTRATE BINDING DOMAIN; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PEPTIDE SUBSTRATE; COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 MOL_ID: 2 KEYWDS DNAK, HEAT SHOCK PROTEIN 70 KDA (HSP70), COMPLEX (MOLECULAR KEYWDS 2 CHAPERONE/PEPTIDE) EXPDTA X-RAY DIFFRACTION AUTHOR X.ZHU,X.ZHAO,W.F.BURKHOLDER,A.GRAGEROV,C.M.OGATA, AUTHOR 2 M.E.GOTTESMAN,W.A.HENDRICKSON REVDAT 2 24-FEB-09 1DKY 1 VERSN REVDAT 1 07-DEC-96 1DKY 0 JRNL AUTH X.ZHU,X.ZHAO,W.F.BURKHOLDER,A.GRAGEROV,C.M.OGATA, JRNL AUTH 2 M.E.GOTTESMAN,W.A.HENDRICKSON JRNL TITL STRUCTURAL ANALYSIS OF SUBSTRATE BINDING BY THE JRNL TITL 2 MOLECULAR CHAPERONE DNAK. JRNL REF SCIENCE V. 272 1606 1996 JRNL REFN ISSN 0036-8075 JRNL PMID 8658133 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 79.3 REMARK 3 NUMBER OF REFLECTIONS : 8486 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.309 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2971 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 28 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 2.10 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.25 REMARK 3 IMPROPER ANGLES (DEGREES) : 2.23 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1DKY COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9117 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 85.2 REMARK 200 DATA REDUNDANCY : 37.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 48.20000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.50000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 48.20000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 58.50000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 96.40000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 117.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 96.40000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 117.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 600 REMARK 465 ILE A 601 REMARK 465 ALA A 602 REMARK 465 GLN A 603 REMARK 465 GLN A 604 REMARK 465 GLN A 605 REMARK 465 HIS A 606 REMARK 465 ALA A 607 REMARK 465 ALA B 592 REMARK 465 GLN B 593 REMARK 465 VAL B 594 REMARK 465 SER B 595 REMARK 465 GLN B 596 REMARK 465 LYS B 597 REMARK 465 LEU B 598 REMARK 465 MET B 599 REMARK 465 GLU B 600 REMARK 465 ILE B 601 REMARK 465 ALA B 602 REMARK 465 GLN B 603 REMARK 465 GLN B 604 REMARK 465 GLN B 605 REMARK 465 HIS B 606 REMARK 465 ALA B 607 REMARK 465 ASN C 1 REMARK 465 THR C 6 REMARK 465 GLY C 7 REMARK 465 ASN D 1 REMARK 465 THR D 6 REMARK 465 GLY D 7 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 389 CG1 CG2 REMARK 470 THR A 395 OG1 CG2 REMARK 470 ILE A 418 CG1 CG2 CD1 REMARK 470 LYS A 421 CG CD CE NZ REMARK 470 GLU A 430 CG CD OE1 OE2 REMARK 470 ASN A 432 CG OD1 ND2 REMARK 470 LYS A 446 CG CD CE NZ REMARK 470 GLN A 456 CG CD OE1 NE2 REMARK 470 PRO A 466 CG CD REMARK 470 ARG A 467 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 491 CG CD CE NZ REMARK 470 ASN A 492 CG OD1 ND2 REMARK 470 LYS A 495 CG CD CE NZ REMARK 470 GLN A 497 CG CD OE1 NE2 REMARK 470 ARG A 517 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 524 CG CD OE1 OE2 REMARK 470 ARG A 527 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 530 CG CD OE1 OE2 REMARK 470 LEU A 543 CG CD1 CD2 REMARK 470 HIS A 544 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 548 CG CD CE NZ REMARK 470 GLN A 549 CG CD OE1 NE2 REMARK 470 VAL A 550 CG1 CG2 REMARK 470 GLU A 552 CG CD OE1 OE2 REMARK 470 ASP A 555 CG OD1 OD2 REMARK 470 THR A 570 OG1 CG2 REMARK 470 THR A 574 OG1 CG2 REMARK 470 LYS A 577 CG CD CE NZ REMARK 470 GLU A 579 CG CD OE1 OE2 REMARK 470 GLN A 596 CG CD OE1 NE2 REMARK 470 LYS A 597 CG CD CE NZ REMARK 470 MET A 599 CG SD CE REMARK 470 VAL B 389 CG1 CG2 REMARK 470 LEU B 391 CG CD1 CD2 REMARK 470 THR B 395 OG1 CG2 REMARK 470 ILE B 418 CG1 CG2 CD1 REMARK 470 LYS B 421 CG CD CE NZ REMARK 470 GLU B 430 CG CD OE1 OE2 REMARK 470 ASN B 432 CG OD1 ND2 REMARK 470 LYS B 446 CG CD CE NZ REMARK 470 GLN B 456 CG CD OE1 NE2 REMARK 470 PRO B 466 CG CD REMARK 470 ARG B 467 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 491 CG CD CE NZ REMARK 470 ASN B 492 CG OD1 ND2 REMARK 470 LYS B 495 CG CD CE NZ REMARK 470 GLN B 497 CG CD OE1 NE2 REMARK 470 ARG B 517 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 524 CG CD OE1 OE2 REMARK 470 ARG B 527 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 530 CG CD OE1 OE2 REMARK 470 LEU B 543 CG CD1 CD2 REMARK 470 HIS B 544 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 548 CG CD CE NZ REMARK 470 GLN B 549 CG CD OE1 NE2 REMARK 470 VAL B 550 CG1 CG2 REMARK 470 GLU B 552 CG CD OE1 OE2 REMARK 470 ASP B 555 CG OD1 OD2 REMARK 470 THR B 570 OG1 CG2 REMARK 470 THR B 574 OG1 CG2 REMARK 470 LYS B 577 CG CD CE NZ REMARK 470 GLU B 579 CG CD OE1 OE2 REMARK 470 ARG C 2 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 2 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 419 C - N - CA ANGL. DEV. = 36.0 DEGREES REMARK 500 PRO A 419 C - N - CD ANGL. DEV. = -38.0 DEGREES REMARK 500 PRO B 419 CA - N - CD ANGL. DEV. = -8.7 DEGREES REMARK 500 PRO B 419 C - N - CA ANGL. DEV. = 52.7 DEGREES REMARK 500 PRO B 419 C - N - CD ANGL. DEV. = -43.4 DEGREES REMARK 500 ASP B 561 N - CA - C ANGL. DEV. = -17.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 419 85.50 -34.85 REMARK 500 LYS A 491 8.06 -62.23 REMARK 500 ASN A 492 -70.99 -125.27 REMARK 500 ALA A 523 -50.61 -24.04 REMARK 500 GLU A 552 -8.57 -50.19 REMARK 500 ALA A 553 60.90 -166.59 REMARK 500 ALA A 559 -91.21 -13.46 REMARK 500 ASP A 560 60.05 -67.66 REMARK 500 ASP A 561 -60.09 -161.53 REMARK 500 GLU A 579 28.87 -144.76 REMARK 500 LYS A 597 37.54 -73.95 REMARK 500 LEU A 598 12.97 -171.53 REMARK 500 PRO B 419 71.26 153.60 REMARK 500 PRO B 464 133.35 -37.72 REMARK 500 LYS B 491 12.17 -58.60 REMARK 500 ASN B 492 -63.78 -130.41 REMARK 500 ALA B 523 -44.49 -24.79 REMARK 500 GLU B 552 -8.26 -51.76 REMARK 500 ALA B 553 61.56 -165.73 REMARK 500 ALA B 559 -92.47 -11.69 REMARK 500 ASP B 560 63.20 -66.28 REMARK 500 ASP B 561 -63.60 -164.54 REMARK 500 GLU B 566 -31.29 -39.99 REMARK 500 GLU B 579 23.40 -140.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2016 DISTANCE = 5.46 ANGSTROMS DBREF 1DKY A 389 607 UNP P0A6Y8 DNAK_ECOLI 388 606 DBREF 1DKY B 389 607 UNP P0A6Y8 DNAK_ECOLI 388 606 DBREF 1DKY C 1 7 PDB 1DKY 1DKY 1 7 DBREF 1DKY D 1 7 PDB 1DKY 1DKY 1 7 SEQADV 1DKY SER A 437 UNP P0A6Y8 THR 436 CONFLICT SEQADV 1DKY SER B 437 UNP P0A6Y8 THR 436 CONFLICT SEQRES 1 A 219 VAL LEU LEU LEU ASP VAL THR PRO LEU SER LEU GLY ILE SEQRES 2 A 219 GLU THR MET GLY GLY VAL MET THR THR LEU ILE ALA LYS SEQRES 3 A 219 ASN THR THR ILE PRO THR LYS HIS SER GLN VAL PHE SER SEQRES 4 A 219 THR ALA GLU ASP ASN GLN SER ALA VAL SER ILE HIS VAL SEQRES 5 A 219 LEU GLN GLY GLU ARG LYS ARG ALA ALA ASP ASN LYS SER SEQRES 6 A 219 LEU GLY GLN PHE ASN LEU ASP GLY ILE ASN PRO ALA PRO SEQRES 7 A 219 ARG GLY MET PRO GLN ILE GLU VAL THR PHE ASP ILE ASP SEQRES 8 A 219 ALA ASP GLY ILE LEU HIS VAL SER ALA LYS ASP LYS ASN SEQRES 9 A 219 SER GLY LYS GLU GLN LYS ILE THR ILE LYS ALA SER SER SEQRES 10 A 219 GLY LEU ASN GLU ASP GLU ILE GLN LYS MET VAL ARG ASP SEQRES 11 A 219 ALA GLU ALA ASN ALA GLU ALA ASP ARG LYS PHE GLU GLU SEQRES 12 A 219 LEU VAL GLN THR ARG ASN GLN GLY ASP HIS LEU LEU HIS SEQRES 13 A 219 SER THR ARG LYS GLN VAL GLU GLU ALA GLY ASP LYS LEU SEQRES 14 A 219 PRO ALA ASP ASP LYS THR ALA ILE GLU SER ALA LEU THR SEQRES 15 A 219 ALA LEU GLU THR ALA LEU LYS GLY GLU ASP LYS ALA ALA SEQRES 16 A 219 ILE GLU ALA LYS MET GLN GLU LEU ALA GLN VAL SER GLN SEQRES 17 A 219 LYS LEU MET GLU ILE ALA GLN GLN GLN HIS ALA SEQRES 1 B 219 VAL LEU LEU LEU ASP VAL THR PRO LEU SER LEU GLY ILE SEQRES 2 B 219 GLU THR MET GLY GLY VAL MET THR THR LEU ILE ALA LYS SEQRES 3 B 219 ASN THR THR ILE PRO THR LYS HIS SER GLN VAL PHE SER SEQRES 4 B 219 THR ALA GLU ASP ASN GLN SER ALA VAL SER ILE HIS VAL SEQRES 5 B 219 LEU GLN GLY GLU ARG LYS ARG ALA ALA ASP ASN LYS SER SEQRES 6 B 219 LEU GLY GLN PHE ASN LEU ASP GLY ILE ASN PRO ALA PRO SEQRES 7 B 219 ARG GLY MET PRO GLN ILE GLU VAL THR PHE ASP ILE ASP SEQRES 8 B 219 ALA ASP GLY ILE LEU HIS VAL SER ALA LYS ASP LYS ASN SEQRES 9 B 219 SER GLY LYS GLU GLN LYS ILE THR ILE LYS ALA SER SER SEQRES 10 B 219 GLY LEU ASN GLU ASP GLU ILE GLN LYS MET VAL ARG ASP SEQRES 11 B 219 ALA GLU ALA ASN ALA GLU ALA ASP ARG LYS PHE GLU GLU SEQRES 12 B 219 LEU VAL GLN THR ARG ASN GLN GLY ASP HIS LEU LEU HIS SEQRES 13 B 219 SER THR ARG LYS GLN VAL GLU GLU ALA GLY ASP LYS LEU SEQRES 14 B 219 PRO ALA ASP ASP LYS THR ALA ILE GLU SER ALA LEU THR SEQRES 15 B 219 ALA LEU GLU THR ALA LEU LYS GLY GLU ASP LYS ALA ALA SEQRES 16 B 219 ILE GLU ALA LYS MET GLN GLU LEU ALA GLN VAL SER GLN SEQRES 17 B 219 LYS LEU MET GLU ILE ALA GLN GLN GLN HIS ALA SEQRES 1 C 7 ASN ARG LEU LEU LEU THR GLY SEQRES 1 D 7 ASN ARG LEU LEU LEU THR GLY FORMUL 5 HOH *28(H2 O) HELIX 1 1 ALA A 448 ASP A 450 5 3 HELIX 2 2 GLU A 509 ALA A 553 1 45 HELIX 3 3 ALA A 559 LYS A 577 1 19 HELIX 4 4 LYS A 581 VAL A 594 1 14 HELIX 5 5 ALA B 448 ASP B 450 5 3 HELIX 6 6 GLU B 509 ALA B 553 1 45 HELIX 7 7 ALA B 559 LYS B 577 1 19 HELIX 8 8 LYS B 581 GLU B 590 1 10 SHEET 1 A 4 MET A 408 ILE A 412 0 SHEET 2 A 4 LEU A 399 GLU A 402 -1 N ILE A 401 O THR A 409 SHEET 3 A 4 VAL A 436 GLN A 442 -1 N LEU A 441 O GLY A 400 SHEET 4 A 4 LYS A 452 LEU A 459 -1 N LEU A 459 O VAL A 436 SHEET 1 B 4 THR A 420 PHE A 426 0 SHEET 2 B 4 ILE A 472 ILE A 478 -1 N ILE A 478 O THR A 420 SHEET 3 B 4 LEU A 484 ASP A 490 -1 N LYS A 489 O GLU A 473 SHEET 4 B 4 GLU A 496 ILE A 501 -1 N ILE A 501 O LEU A 484 SHEET 1 C 4 MET B 408 ILE B 412 0 SHEET 2 C 4 LEU B 399 GLU B 402 -1 N ILE B 401 O THR B 409 SHEET 3 C 4 VAL B 436 GLN B 442 -1 N LEU B 441 O GLY B 400 SHEET 4 C 4 LYS B 452 LEU B 459 -1 N LEU B 459 O VAL B 436 SHEET 1 D 4 THR B 420 PHE B 426 0 SHEET 2 D 4 ILE B 472 ILE B 478 -1 N ILE B 478 O THR B 420 SHEET 3 D 4 LEU B 484 ASP B 490 -1 N LYS B 489 O GLU B 473 SHEET 4 D 4 GLU B 496 ILE B 501 -1 N ILE B 501 O LEU B 484 CISPEP 1 ILE A 418 PRO A 419 0 0.87 CRYST1 96.400 117.000 36.200 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010373 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008547 0.000000 0.00000 SCALE3 0.000000 0.000000 0.027624 0.00000