HEADER TRANSFERASE/SUBSTRATE 03-AUG-97 1AQX TITLE GLUTATHIONE S-TRANSFERASE IN COMPLEX WITH MEISENHEIMER COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: GST; COMPND 5 EC: 2.5.1.18; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 ORGAN: PLACENTA; SOURCE 6 CELLULAR_LOCATION: CYTOSOL; SOURCE 7 GENE: GTP_HUMAN; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE, GLUTATHIONE S-TRANSFERASE, CLASS PI, TRANSITION STATE, KEYWDS 2 TRANSFERASE-SUBSTRATE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR L.PRADE,R.HUBER,T.H.MANOHARAN,W.E.FAHL,W.REUTER REVDAT 4 27-JUL-11 1AQX 1 REMARK REVDAT 3 13-JUL-11 1AQX 1 VERSN REVDAT 2 24-FEB-09 1AQX 1 VERSN REVDAT 1 18-MAR-98 1AQX 0 JRNL AUTH L.PRADE,R.HUBER,T.H.MANOHARAN,W.E.FAHL,W.REUTER JRNL TITL STRUCTURES OF CLASS PI GLUTATHIONE S-TRANSFERASE FROM HUMAN JRNL TITL 2 PLACENTA IN COMPLEX WITH SUBSTRATE, TRANSITION-STATE JRNL TITL 3 ANALOGUE AND INHIBITOR. JRNL REF STRUCTURE V. 5 1287 1997 JRNL REFN ISSN 0969-2126 JRNL PMID 9351803 JRNL DOI 10.1016/S0969-2126(97)00281-5 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.REINEMER,H.W.DIRR,R.LADENSTEIN,R.HUBER,M.LO BELLO, REMARK 1 AUTH 2 G.FEDERICI,M.W.PARKER REMARK 1 TITL THREE-DIMENSIONAL STRUCTURE OF CLASS PI GLUTATHIONE REMARK 1 TITL 2 S-TRANSFERASE FROM HUMAN PLACENTA IN COMPLEX WITH REMARK 1 TITL 3 S-HEXYLGLUTATHIONE AT 2.8 A RESOLUTION REMARK 1 REF J.MOL.BIOL. V. 227 214 1992 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.5 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 7.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.0 REMARK 3 NUMBER OF REFLECTIONS : 52602 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.09 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1087 REMARK 3 BIN R VALUE (WORKING SET) : 0.3110 REMARK 3 BIN FREE R VALUE : 0.4500 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6524 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 188 REMARK 3 SOLVENT ATOMS : 550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.58 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.82 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.86 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.500 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.000 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.000 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.500 ; 2.500 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1AQX COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-SEP-96 REMARK 200 TEMPERATURE (KELVIN) : 113 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH2R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (AGROVATA, ROTAVATA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 100891 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 30.269 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.19500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.28500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 1 REMARK 465 PRO B 1 REMARK 465 PRO C 1 REMARK 465 PRO D 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 3019 O HOH B 3108 1.41 REMARK 500 O HOH D 3067 O HOH D 3250 1.42 REMARK 500 O HOH B 3148 O HOH B 3267 1.47 REMARK 500 O HOH D 3028 O HOH D 3060 1.72 REMARK 500 O HOH C 3229 O HOH C 3303 1.86 REMARK 500 O HOH A 3029 O HOH A 3413 1.87 REMARK 500 O HOH D 3011 O HOH D 3096 1.87 REMARK 500 O HOH A 3085 O HOH A 3089 1.88 REMARK 500 O HOH C 3069 O HOH C 3110 1.90 REMARK 500 O HOH A 3223 O HOH A 3429 1.90 REMARK 500 O HOH A 3036 O HOH A 3089 1.96 REMARK 500 O HOH C 3103 O HOH C 3104 1.97 REMARK 500 O HOH C 3004 O HOH C 3039 1.98 REMARK 500 O HOH B 3031 O HOH B 3061 1.98 REMARK 500 O HOH B 3093 O HOH B 3408 1.99 REMARK 500 O HOH D 3058 O HOH D 3107 2.02 REMARK 500 O HOH D 3525 O HOH D 3543 2.04 REMARK 500 O HOH D 3018 O HOH D 3273 2.05 REMARK 500 O HOH C 3043 O HOH C 3086 2.06 REMARK 500 O HOH D 3105 O HOH D 3521 2.08 REMARK 500 O ASN C 136 N GLY C 138 2.10 REMARK 500 O HOH C 3080 O HOH C 3496 2.12 REMARK 500 O HOH A 3051 O HOH A 3341 2.14 REMARK 500 O HOH C 3433 O HOH C 3440 2.14 REMARK 500 O HOH C 3247 O HOH C 3410 2.15 REMARK 500 OD1 ASP A 152 OH TYR A 179 2.16 REMARK 500 O HOH C 3192 O HOH C 3314 2.17 REMARK 500 O HOH C 3075 O HOH D 3131 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 3493 O HOH D 3102 2656 1.46 REMARK 500 O HOH A 3209 O HOH D 3360 2656 1.81 REMARK 500 O HOH B 3380 O HOH D 3121 1455 1.83 REMARK 500 O HOH A 3152 O HOH C 3294 1554 1.96 REMARK 500 O HOH A 3446 O HOH C 3299 1554 2.06 REMARK 500 O HOH A 3285 O HOH D 3325 2646 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A3055 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH A3179 DISTANCE = 5.21 ANGSTROMS REMARK 525 HOH A3424 DISTANCE = 6.62 ANGSTROMS REMARK 525 HOH A3464 DISTANCE = 5.17 ANGSTROMS REMARK 525 HOH A3475 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH B3094 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH B3315 DISTANCE = 5.44 ANGSTROMS REMARK 525 HOH B3369 DISTANCE = 5.18 ANGSTROMS REMARK 525 HOH B3373 DISTANCE = 5.31 ANGSTROMS REMARK 525 HOH B3431 DISTANCE = 5.31 ANGSTROMS REMARK 525 HOH B3448 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH B3522 DISTANCE = 5.09 ANGSTROMS REMARK 525 HOH C3073 DISTANCE = 5.07 ANGSTROMS REMARK 525 HOH C3356 DISTANCE = 5.03 ANGSTROMS REMARK 525 HOH C3433 DISTANCE = 5.26 ANGSTROMS REMARK 525 HOH C3436 DISTANCE = 5.34 ANGSTROMS REMARK 525 HOH C3441 DISTANCE = 6.85 ANGSTROMS REMARK 525 HOH C3470 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH C3499 DISTANCE = 5.27 ANGSTROMS REMARK 525 HOH C3529 DISTANCE = 5.10 ANGSTROMS REMARK 525 HOH D3317 DISTANCE = 5.08 ANGSTROMS REMARK 525 HOH D3319 DISTANCE = 5.02 ANGSTROMS REMARK 525 HOH D3401 DISTANCE = 6.17 ANGSTROMS REMARK 525 HOH D3451 DISTANCE = 5.08 ANGSTROMS REMARK 525 HOH D3476 DISTANCE = 8.09 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTD A 2101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTD B 2201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTD C 2301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTD D 2401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES A 2500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES B 2600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES C 2700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES D 2800 DBREF 1AQX A 1 209 UNP P09211 GTP_HUMAN 1 209 DBREF 1AQX B 1 209 UNP P09211 GTP_HUMAN 1 209 DBREF 1AQX C 1 209 UNP P09211 GTP_HUMAN 1 209 DBREF 1AQX D 1 209 UNP P09211 GTP_HUMAN 1 209 SEQRES 1 A 209 PRO PRO TYR THR VAL VAL TYR PHE PRO VAL ARG GLY ARG SEQRES 2 A 209 CYS ALA ALA LEU ARG MET LEU LEU ALA ASP GLN GLY GLN SEQRES 3 A 209 SER TRP LYS GLU GLU VAL VAL THR VAL GLU THR TRP GLN SEQRES 4 A 209 GLU GLY SER LEU LYS ALA SER CYS LEU TYR GLY GLN LEU SEQRES 5 A 209 PRO LYS PHE GLN ASP GLY ASP LEU THR LEU TYR GLN SER SEQRES 6 A 209 ASN THR ILE LEU ARG HIS LEU GLY ARG THR LEU GLY LEU SEQRES 7 A 209 TYR GLY LYS ASP GLN GLN GLU ALA ALA LEU VAL ASP MET SEQRES 8 A 209 VAL ASN ASP GLY VAL GLU ASP LEU ARG CYS LYS TYR ILE SEQRES 9 A 209 SER LEU ILE TYR THR ASN TYR GLU ALA GLY LYS ASP ASP SEQRES 10 A 209 TYR VAL LYS ALA LEU PRO GLY GLN LEU LYS PRO PHE GLU SEQRES 11 A 209 THR LEU LEU SER GLN ASN GLN GLY GLY LYS THR PHE ILE SEQRES 12 A 209 VAL GLY ASP GLN ILE SER PHE ALA ASP TYR ASN LEU LEU SEQRES 13 A 209 ASP LEU LEU LEU ILE HIS GLU VAL LEU ALA PRO GLY CYS SEQRES 14 A 209 LEU ASP ALA PHE PRO LEU LEU SER ALA TYR VAL GLY ARG SEQRES 15 A 209 LEU SER ALA ARG PRO LYS LEU LYS ALA PHE LEU ALA SER SEQRES 16 A 209 PRO GLU TYR VAL ASN LEU PRO ILE ASN GLY ASN GLY LYS SEQRES 17 A 209 GLN SEQRES 1 B 209 PRO PRO TYR THR VAL VAL TYR PHE PRO VAL ARG GLY ARG SEQRES 2 B 209 CYS ALA ALA LEU ARG MET LEU LEU ALA ASP GLN GLY GLN SEQRES 3 B 209 SER TRP LYS GLU GLU VAL VAL THR VAL GLU THR TRP GLN SEQRES 4 B 209 GLU GLY SER LEU LYS ALA SER CYS LEU TYR GLY GLN LEU SEQRES 5 B 209 PRO LYS PHE GLN ASP GLY ASP LEU THR LEU TYR GLN SER SEQRES 6 B 209 ASN THR ILE LEU ARG HIS LEU GLY ARG THR LEU GLY LEU SEQRES 7 B 209 TYR GLY LYS ASP GLN GLN GLU ALA ALA LEU VAL ASP MET SEQRES 8 B 209 VAL ASN ASP GLY VAL GLU ASP LEU ARG CYS LYS TYR ILE SEQRES 9 B 209 SER LEU ILE TYR THR ASN TYR GLU ALA GLY LYS ASP ASP SEQRES 10 B 209 TYR VAL LYS ALA LEU PRO GLY GLN LEU LYS PRO PHE GLU SEQRES 11 B 209 THR LEU LEU SER GLN ASN GLN GLY GLY LYS THR PHE ILE SEQRES 12 B 209 VAL GLY ASP GLN ILE SER PHE ALA ASP TYR ASN LEU LEU SEQRES 13 B 209 ASP LEU LEU LEU ILE HIS GLU VAL LEU ALA PRO GLY CYS SEQRES 14 B 209 LEU ASP ALA PHE PRO LEU LEU SER ALA TYR VAL GLY ARG SEQRES 15 B 209 LEU SER ALA ARG PRO LYS LEU LYS ALA PHE LEU ALA SER SEQRES 16 B 209 PRO GLU TYR VAL ASN LEU PRO ILE ASN GLY ASN GLY LYS SEQRES 17 B 209 GLN SEQRES 1 C 209 PRO PRO TYR THR VAL VAL TYR PHE PRO VAL ARG GLY ARG SEQRES 2 C 209 CYS ALA ALA LEU ARG MET LEU LEU ALA ASP GLN GLY GLN SEQRES 3 C 209 SER TRP LYS GLU GLU VAL VAL THR VAL GLU THR TRP GLN SEQRES 4 C 209 GLU GLY SER LEU LYS ALA SER CYS LEU TYR GLY GLN LEU SEQRES 5 C 209 PRO LYS PHE GLN ASP GLY ASP LEU THR LEU TYR GLN SER SEQRES 6 C 209 ASN THR ILE LEU ARG HIS LEU GLY ARG THR LEU GLY LEU SEQRES 7 C 209 TYR GLY LYS ASP GLN GLN GLU ALA ALA LEU VAL ASP MET SEQRES 8 C 209 VAL ASN ASP GLY VAL GLU ASP LEU ARG CYS LYS TYR ILE SEQRES 9 C 209 SER LEU ILE TYR THR ASN TYR GLU ALA GLY LYS ASP ASP SEQRES 10 C 209 TYR VAL LYS ALA LEU PRO GLY GLN LEU LYS PRO PHE GLU SEQRES 11 C 209 THR LEU LEU SER GLN ASN GLN GLY GLY LYS THR PHE ILE SEQRES 12 C 209 VAL GLY ASP GLN ILE SER PHE ALA ASP TYR ASN LEU LEU SEQRES 13 C 209 ASP LEU LEU LEU ILE HIS GLU VAL LEU ALA PRO GLY CYS SEQRES 14 C 209 LEU ASP ALA PHE PRO LEU LEU SER ALA TYR VAL GLY ARG SEQRES 15 C 209 LEU SER ALA ARG PRO LYS LEU LYS ALA PHE LEU ALA SER SEQRES 16 C 209 PRO GLU TYR VAL ASN LEU PRO ILE ASN GLY ASN GLY LYS SEQRES 17 C 209 GLN SEQRES 1 D 209 PRO PRO TYR THR VAL VAL TYR PHE PRO VAL ARG GLY ARG SEQRES 2 D 209 CYS ALA ALA LEU ARG MET LEU LEU ALA ASP GLN GLY GLN SEQRES 3 D 209 SER TRP LYS GLU GLU VAL VAL THR VAL GLU THR TRP GLN SEQRES 4 D 209 GLU GLY SER LEU LYS ALA SER CYS LEU TYR GLY GLN LEU SEQRES 5 D 209 PRO LYS PHE GLN ASP GLY ASP LEU THR LEU TYR GLN SER SEQRES 6 D 209 ASN THR ILE LEU ARG HIS LEU GLY ARG THR LEU GLY LEU SEQRES 7 D 209 TYR GLY LYS ASP GLN GLN GLU ALA ALA LEU VAL ASP MET SEQRES 8 D 209 VAL ASN ASP GLY VAL GLU ASP LEU ARG CYS LYS TYR ILE SEQRES 9 D 209 SER LEU ILE TYR THR ASN TYR GLU ALA GLY LYS ASP ASP SEQRES 10 D 209 TYR VAL LYS ALA LEU PRO GLY GLN LEU LYS PRO PHE GLU SEQRES 11 D 209 THR LEU LEU SER GLN ASN GLN GLY GLY LYS THR PHE ILE SEQRES 12 D 209 VAL GLY ASP GLN ILE SER PHE ALA ASP TYR ASN LEU LEU SEQRES 13 D 209 ASP LEU LEU LEU ILE HIS GLU VAL LEU ALA PRO GLY CYS SEQRES 14 D 209 LEU ASP ALA PHE PRO LEU LEU SER ALA TYR VAL GLY ARG SEQRES 15 D 209 LEU SER ALA ARG PRO LYS LEU LYS ALA PHE LEU ALA SER SEQRES 16 D 209 PRO GLU TYR VAL ASN LEU PRO ILE ASN GLY ASN GLY LYS SEQRES 17 D 209 GLN HET GTD A2101 35 HET MES A2500 12 HET GTD B2201 35 HET MES B2600 12 HET GTD C2301 35 HET MES C2700 12 HET GTD D2401 35 HET MES D2800 12 HETNAM GTD 1-(S-GLUTATHIONYL)-2,4,6-TRINITROCYCLOHEXA-2,5-DIENE HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETSYN GTD (S)-2-AMINO-5-((R)-1-(CARBOXYMETHYLAMINO)-1-OXO-3-(2,4, HETSYN 2 GTD 6-TRINITROCYCLOHEXA-2,5-DIENYLTHIO)PROPAN-2-YLAMINO)- HETSYN 3 GTD 5-OXOPENTANOIC ACID FORMUL 5 GTD 4(C16 H20 N6 O12 S) FORMUL 6 MES 4(C6 H13 N O4 S) FORMUL 13 HOH *550(H2 O) HELIX 1 1 LEU A 20 ASP A 23 1 4 HELIX 2 2 SER A 65 HIS A 71 1 7 HELIX 3 3 GLY A 73 LEU A 76 1 4 HELIX 4 4 ALA A 87 LEU A 99 1 13 HELIX 5 5 TYR A 103 THR A 109 1 7 HELIX 6 6 PRO A 123 SER A 134 1 12 HELIX 7 7 GLN A 137 GLY A 139 5 3 HELIX 8 8 PHE A 150 LEU A 165 1 16 HELIX 9 9 PRO A 174 ARG A 182 1 9 HELIX 10 10 PRO A 187 LYS A 190 1 4 HELIX 11 11 PRO A 196 VAL A 199 1 4 HELIX 12 12 GLY B 12 CYS B 14 5 3 HELIX 13 13 LEU B 17 ASP B 23 1 7 HELIX 14 14 SER B 65 LEU B 69 1 5 HELIX 15 15 HIS B 71 ARG B 74 1 4 HELIX 16 16 GLU B 85 LEU B 99 1 15 HELIX 17 17 LEU B 122 LEU B 133 1 12 HELIX 18 18 PHE B 150 LEU B 158 1 9 HELIX 19 19 PRO B 174 ARG B 182 1 9 HELIX 20 20 PRO B 187 LEU B 193 1 7 HELIX 21 21 PRO B 196 VAL B 199 1 4 HELIX 22 22 GLY C 12 LEU C 21 5 10 HELIX 23 23 VAL C 35 TRP C 38 1 4 HELIX 24 24 SER C 65 LEU C 76 1 12 HELIX 25 25 GLU C 85 LEU C 106 1 22 HELIX 26 26 LEU C 122 LEU C 133 1 12 HELIX 27 27 PHE C 150 LEU C 158 5 9 HELIX 28 28 CYS C 169 ALA C 172 5 4 HELIX 29 29 PRO C 174 GLY C 181 1 8 HELIX 30 30 PRO C 187 LYS C 190 1 4 HELIX 31 31 PRO C 196 VAL C 199 1 4 HELIX 32 32 GLY D 12 ALA D 22 5 11 HELIX 33 33 THR D 67 LEU D 76 1 10 HELIX 34 34 GLN D 83 THR D 109 1 27 HELIX 35 35 PRO D 123 LEU D 132 1 10 HELIX 36 36 PHE D 150 LEU D 158 1 9 HELIX 37 37 HIS D 162 LEU D 165 1 4 HELIX 38 38 PRO D 174 SER D 184 1 11 HELIX 39 39 PRO D 187 PHE D 192 1 6 HELIX 40 40 PRO D 196 VAL D 199 1 4 SHEET 1 A 4 TRP A 28 GLU A 30 0 SHEET 2 A 4 TYR A 3 VAL A 6 1 N TYR A 3 O LYS A 29 SHEET 3 A 4 LYS A 54 GLN A 56 -1 N GLN A 56 O THR A 4 SHEET 4 A 4 THR A 61 TYR A 63 -1 N LEU A 62 O PHE A 55 SHEET 1 B 3 TRP B 28 GLU B 30 0 SHEET 2 B 3 TYR B 3 VAL B 6 1 N TYR B 3 O LYS B 29 SHEET 3 B 3 LYS B 54 GLN B 56 -1 N GLN B 56 O THR B 4 SHEET 1 C 3 TYR C 3 VAL C 6 0 SHEET 2 C 3 LYS C 54 ASP C 57 -1 N GLN C 56 O THR C 4 SHEET 3 C 3 LEU C 60 TYR C 63 -1 N LEU C 62 O PHE C 55 SHEET 1 D 4 LYS D 29 VAL D 33 0 SHEET 2 D 4 TYR D 3 PHE D 8 1 N VAL D 5 O LYS D 29 SHEET 3 D 4 LYS D 54 ASP D 57 -1 N GLN D 56 O THR D 4 SHEET 4 D 4 LEU D 60 TYR D 63 -1 N LEU D 62 O PHE D 55 CISPEP 1 LEU A 52 PRO A 53 0 0.73 CISPEP 2 LEU B 52 PRO B 53 0 0.02 CISPEP 3 LEU C 52 PRO C 53 0 0.25 CISPEP 4 LEU D 52 PRO D 53 0 0.18 SITE 1 AC1 14 TYR A 7 VAL A 10 GLY A 12 ARG A 13 SITE 2 AC1 14 TRP A 38 LYS A 44 GLN A 51 LEU A 52 SITE 3 AC1 14 GLN A 64 SER A 65 TYR A 108 HOH A3002 SITE 4 AC1 14 HOH A3228 ASP B 98 SITE 1 AC2 16 ASP A 98 HOH A3020 TYR B 7 VAL B 10 SITE 2 AC2 16 GLY B 12 ARG B 13 TRP B 38 LYS B 44 SITE 3 AC2 16 GLN B 51 LEU B 52 GLN B 64 SER B 65 SITE 4 AC2 16 TYR B 108 HOH B3157 HOH B3212 HOH B3337 SITE 1 AC3 16 PHE C 8 VAL C 10 ARG C 13 TRP C 38 SITE 2 AC3 16 LYS C 44 GLN C 51 LEU C 52 PRO C 53 SITE 3 AC3 16 GLN C 64 SER C 65 TYR C 108 GLY C 205 SITE 4 AC3 16 HOH C3137 HOH C3270 HOH C3348 ASP D 98 SITE 1 AC4 17 ASP C 98 TYR D 7 PHE D 8 VAL D 10 SITE 2 AC4 17 GLY D 12 ARG D 13 TRP D 38 LYS D 44 SITE 3 AC4 17 GLY D 50 GLN D 51 LEU D 52 GLN D 64 SITE 4 AC4 17 SER D 65 TYR D 108 GLY D 205 HOH D3013 SITE 5 AC4 17 HOH D3022 SITE 1 AC5 6 ALA A 22 TRP A 28 GLU A 30 PHE A 192 SITE 2 AC5 6 GLU A 197 ASP C 171 SITE 1 AC6 8 ALA B 22 GLN B 26 TRP B 28 GLU B 30 SITE 2 AC6 8 GLU B 197 HOH B3312 ASP D 171 HOH D3121 SITE 1 AC7 5 ASP A 171 ALA C 22 TRP C 28 GLU C 197 SITE 2 AC7 5 HOH C3172 SITE 1 AC8 6 ASP B 171 ALA D 22 GLN D 26 TRP D 28 SITE 2 AC8 6 PHE D 192 GLU D 197 CRYST1 89.590 72.570 69.340 90.00 90.11 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011162 0.000000 0.000021 0.00000 SCALE2 0.000000 0.013780 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014422 0.00000 MTRIX1 1 -0.991840 -0.081933 -0.097675 7.14246 1 MTRIX2 1 -0.078451 0.996156 -0.038980 1.17497 1 MTRIX3 1 0.100493 -0.030999 -0.994455 29.57692 1 MTRIX1 2 -0.997447 0.051578 0.049391 92.78086 1 MTRIX2 2 0.051062 0.998627 -0.011651 -1.82226 1 MTRIX3 2 -0.049924 -0.009099 -0.998712 102.38508 1