HEADER PROTEIN BINDING 16-MAY-17 5VTB TITLE CRYSTAL STRUCTURE OF RBBP4 BOUND TO BCL11A PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE-BINDING PROTEIN RBBP4; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT C, CAF-1 SUBUNIT C, COMPND 5 CHROMATIN ASSEMBLY FACTOR I P48 SUBUNIT,CAF-I P48, NUCLEOSOME- COMPND 6 REMODELING FACTOR SUBUNIT RBAP48, RETINOBLASTOMA-BINDING PROTEIN 4, COMPND 7 RBBP-4, RETINOBLASTOMA-BINDING PROTEIN P48; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: B-CELL LYMPHOMA/LEUKEMIA 11A; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: UNP RESIDUES 2-16; COMPND 13 SYNONYM: BCL-11A, B-CELL CLL/LYMPHOMA 11A, COUP-TF-INTERACTING COMPND 14 PROTEIN 1, ECOTROPIC VIRAL INTEGRATION SITE 9 PROTEIN HOMOLOG, EVI-9, COMPND 15 ZINC FINGER PROTEIN 856; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RBBP4, RBAP48; SOURCE 6 EXPRESSION_SYSTEM: UNIDENTIFIED BACULOVIRUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10469; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS RBBP4, HISTONE BINDING PROTEIN, WD40 DOMAIN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.L.MEAGHER,J.A.STUCKEY REVDAT 3 04-OCT-23 5VTB 1 REMARK REVDAT 2 30-JAN-19 5VTB 1 JRNL REVDAT 1 27-DEC-17 5VTB 0 JRNL AUTH R.R.MOODY,M.C.LO,J.L.MEAGHER,C.C.LIN,N.O.STEVERS, JRNL AUTH 2 S.L.TINSLEY,I.JUNG,A.MATVEKAS,J.A.STUCKEY,D.SUN JRNL TITL PROBING THE INTERACTION BETWEEN THE HISTONE JRNL TITL 2 METHYLTRANSFERASE/DEACETYLASE SUBUNIT RBBP4/7 AND THE JRNL TITL 3 TRANSCRIPTION FACTOR BCL11A IN EPIGENETIC COMPLEXES. JRNL REF J. BIOL. CHEM. V. 293 2125 2018 JRNL REFN ESSN 1083-351X JRNL PMID 29263092 JRNL DOI 10.1074/JBC.M117.811463 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.32 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 14917 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.710 REMARK 3 FREE R VALUE TEST SET COUNT : 702 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.39 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.56 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.92 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2163 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1990 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2071 REMARK 3 BIN R VALUE (WORKING SET) : 0.1960 REMARK 3 BIN FREE R VALUE : 0.2640 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.25 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 92 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2766 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.59180 REMARK 3 B22 (A**2) : -2.62790 REMARK 3 B33 (A**2) : 0.03610 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.310 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.532 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.266 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.462 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.263 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.922 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.901 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2848 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3896 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1243 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 66 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 417 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2848 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 384 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3194 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.08 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.45 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.41 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VTB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1000227979. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : DIAMOND(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15853 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.390 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 8.200 REMARK 200 R MERGE (I) : 0.11500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 8.00 REMARK 200 R MERGE FOR SHELL (I) : 0.56600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4R7A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG2000 MME, 0.1 M POTASSIUM REMARK 280 THIOCYANATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.65050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.98400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.63200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.98400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.65050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.63200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -6 REMARK 465 ALA A -5 REMARK 465 MET A -4 REMARK 465 ASP A -3 REMARK 465 PRO A -2 REMARK 465 GLU A -1 REMARK 465 PHE A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ASP A 3 REMARK 465 LYS A 4 REMARK 465 GLU A 5 REMARK 465 ALA A 6 REMARK 465 ALA A 7 REMARK 465 PHE A 8 REMARK 465 ASP A 9 REMARK 465 ASP A 10 REMARK 465 ALA A 11 REMARK 465 VAL A 12 REMARK 465 GLU A 13 REMARK 465 GLU A 14 REMARK 465 ARG A 15 REMARK 465 VAL A 16 REMARK 465 ILE A 17 REMARK 465 ASN A 18 REMARK 465 GLU A 19 REMARK 465 GLU A 20 REMARK 465 TYR A 21 REMARK 465 LYS A 22 REMARK 465 ILE A 23 REMARK 465 TRP A 24 REMARK 465 ARG A 55 REMARK 465 PRO A 56 REMARK 465 GLU A 57 REMARK 465 GLY A 58 REMARK 465 ASP A 89 REMARK 465 ASP A 90 REMARK 465 ALA A 91 REMARK 465 GLN A 92 REMARK 465 PHE A 93 REMARK 465 ASP A 94 REMARK 465 ALA A 95 REMARK 465 SER A 96 REMARK 465 HIS A 97 REMARK 465 TYR A 98 REMARK 465 ASP A 99 REMARK 465 SER A 100 REMARK 465 GLU A 101 REMARK 465 LYS A 102 REMARK 465 GLY A 103 REMARK 465 GLU A 104 REMARK 465 PHE A 105 REMARK 465 GLY A 106 REMARK 465 GLY A 107 REMARK 465 PHE A 108 REMARK 465 GLY A 109 REMARK 465 SER A 110 REMARK 465 VAL A 111 REMARK 465 SER A 112 REMARK 465 GLU A 353 REMARK 465 GLN A 354 REMARK 465 SER A 355 REMARK 465 PRO A 356 REMARK 465 GLU A 357 REMARK 465 ASP A 358 REMARK 465 ALA A 359 REMARK 465 GLU A 360 REMARK 465 ASP A 361 REMARK 465 GLY A 362 REMARK 465 GLU A 412 REMARK 465 ASP A 413 REMARK 465 PRO A 414 REMARK 465 GLU A 415 REMARK 465 GLY A 416 REMARK 465 SER A 417 REMARK 465 VAL A 418 REMARK 465 ASP A 419 REMARK 465 PRO A 420 REMARK 465 GLU A 421 REMARK 465 GLY A 422 REMARK 465 GLN A 423 REMARK 465 GLY A 424 REMARK 465 SER A 425 REMARK 465 SER B 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 25 CG CD CE NZ REMARK 470 LYS A 26 CG CD CE NZ REMARK 470 VAL A 35 CG1 CG2 REMARK 470 ASP A 52 CG OD1 OD2 REMARK 470 LYS A 59 CG CD CE NZ REMARK 470 ASP A 60 CG OD1 OD2 REMARK 470 ASP A 74 CG OD1 OD2 REMARK 470 LYS A 114 CG CD CE NZ REMARK 470 GLU A 116 CG CD OE1 OE2 REMARK 470 GLU A 124 CG CD OE1 OE2 REMARK 470 VAL A 149 CG1 CG2 REMARK 470 LYS A 156 CG CD CE NZ REMARK 470 SER A 159 CB OG REMARK 470 LYS A 160 CG CD CE NZ REMARK 470 GLU A 166 CG CD OE1 OE2 REMARK 470 GLN A 177 CG CD OE1 NE2 REMARK 470 LYS A 212 CG CD CE NZ REMARK 470 GLU A 213 CG CD OE1 OE2 REMARK 470 ASN A 260 CG OD1 ND2 REMARK 470 LYS A 264 CG CD CE NZ REMARK 470 ALA A 274 CB REMARK 470 LYS A 296 CG CD CE NZ REMARK 470 LYS A 307 CG CD CE NZ REMARK 470 LEU A 308 CG CD1 CD2 REMARK 470 GLU A 314 CG CD OE1 OE2 REMARK 470 LYS A 317 CB CG CD CE NZ REMARK 470 ARG A 341 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 349 CG CD CE NZ REMARK 470 LYS A 376 CG CD CE NZ REMARK 470 GLU A 386 CG CD OE1 OE2 REMARK 470 ILE A 398 CG1 CG2 CD1 REMARK 470 ASN A 407 CG OD1 ND2 REMARK 470 ASN A 410 CG OD1 ND2 REMARK 470 ASP A 411 CG OD1 OD2 REMARK 470 ARG B 3 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 8 CG CD CE NZ REMARK 470 LYS B 14 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 136 87.66 -158.31 REMARK 500 PRO A 137 0.08 -66.64 REMARK 500 SER A 146 -165.31 -106.17 REMARK 500 TYR A 181 -56.00 -124.20 REMARK 500 LYS A 296 13.17 82.17 REMARK 500 ASN A 305 69.42 -162.85 REMARK 500 SER A 315 -34.14 -174.65 REMARK 500 ASN A 397 -0.03 84.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 729 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH A 730 DISTANCE = 7.58 ANGSTROMS REMARK 525 HOH A 731 DISTANCE = 8.52 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 501 DBREF 5VTB A 1 425 UNP Q09028 RBBP4_HUMAN 1 425 DBREF 5VTB B 2 16 UNP Q9H165 BC11A_HUMAN 2 16 SEQADV 5VTB GLY A -6 UNP Q09028 EXPRESSION TAG SEQADV 5VTB ALA A -5 UNP Q09028 EXPRESSION TAG SEQADV 5VTB MET A -4 UNP Q09028 EXPRESSION TAG SEQADV 5VTB ASP A -3 UNP Q09028 EXPRESSION TAG SEQADV 5VTB PRO A -2 UNP Q09028 EXPRESSION TAG SEQADV 5VTB GLU A -1 UNP Q09028 EXPRESSION TAG SEQADV 5VTB PHE A 0 UNP Q09028 EXPRESSION TAG SEQRES 1 A 432 GLY ALA MET ASP PRO GLU PHE MET ALA ASP LYS GLU ALA SEQRES 2 A 432 ALA PHE ASP ASP ALA VAL GLU GLU ARG VAL ILE ASN GLU SEQRES 3 A 432 GLU TYR LYS ILE TRP LYS LYS ASN THR PRO PHE LEU TYR SEQRES 4 A 432 ASP LEU VAL MET THR HIS ALA LEU GLU TRP PRO SER LEU SEQRES 5 A 432 THR ALA GLN TRP LEU PRO ASP VAL THR ARG PRO GLU GLY SEQRES 6 A 432 LYS ASP PHE SER ILE HIS ARG LEU VAL LEU GLY THR HIS SEQRES 7 A 432 THR SER ASP GLU GLN ASN HIS LEU VAL ILE ALA SER VAL SEQRES 8 A 432 GLN LEU PRO ASN ASP ASP ALA GLN PHE ASP ALA SER HIS SEQRES 9 A 432 TYR ASP SER GLU LYS GLY GLU PHE GLY GLY PHE GLY SER SEQRES 10 A 432 VAL SER GLY LYS ILE GLU ILE GLU ILE LYS ILE ASN HIS SEQRES 11 A 432 GLU GLY GLU VAL ASN ARG ALA ARG TYR MET PRO GLN ASN SEQRES 12 A 432 PRO CYS ILE ILE ALA THR LYS THR PRO SER SER ASP VAL SEQRES 13 A 432 LEU VAL PHE ASP TYR THR LYS HIS PRO SER LYS PRO ASP SEQRES 14 A 432 PRO SER GLY GLU CYS ASN PRO ASP LEU ARG LEU ARG GLY SEQRES 15 A 432 HIS GLN LYS GLU GLY TYR GLY LEU SER TRP ASN PRO ASN SEQRES 16 A 432 LEU SER GLY HIS LEU LEU SER ALA SER ASP ASP HIS THR SEQRES 17 A 432 ILE CYS LEU TRP ASP ILE SER ALA VAL PRO LYS GLU GLY SEQRES 18 A 432 LYS VAL VAL ASP ALA LYS THR ILE PHE THR GLY HIS THR SEQRES 19 A 432 ALA VAL VAL GLU ASP VAL SER TRP HIS LEU LEU HIS GLU SEQRES 20 A 432 SER LEU PHE GLY SER VAL ALA ASP ASP GLN LYS LEU MET SEQRES 21 A 432 ILE TRP ASP THR ARG SER ASN ASN THR SER LYS PRO SER SEQRES 22 A 432 HIS SER VAL ASP ALA HIS THR ALA GLU VAL ASN CYS LEU SEQRES 23 A 432 SER PHE ASN PRO TYR SER GLU PHE ILE LEU ALA THR GLY SEQRES 24 A 432 SER ALA ASP LYS THR VAL ALA LEU TRP ASP LEU ARG ASN SEQRES 25 A 432 LEU LYS LEU LYS LEU HIS SER PHE GLU SER HIS LYS ASP SEQRES 26 A 432 GLU ILE PHE GLN VAL GLN TRP SER PRO HIS ASN GLU THR SEQRES 27 A 432 ILE LEU ALA SER SER GLY THR ASP ARG ARG LEU ASN VAL SEQRES 28 A 432 TRP ASP LEU SER LYS ILE GLY GLU GLU GLN SER PRO GLU SEQRES 29 A 432 ASP ALA GLU ASP GLY PRO PRO GLU LEU LEU PHE ILE HIS SEQRES 30 A 432 GLY GLY HIS THR ALA LYS ILE SER ASP PHE SER TRP ASN SEQRES 31 A 432 PRO ASN GLU PRO TRP VAL ILE CYS SER VAL SER GLU ASP SEQRES 32 A 432 ASN ILE MET GLN VAL TRP GLN MET ALA GLU ASN ILE TYR SEQRES 33 A 432 ASN ASP GLU ASP PRO GLU GLY SER VAL ASP PRO GLU GLY SEQRES 34 A 432 GLN GLY SER SEQRES 1 B 15 SER ARG ARG LYS GLN GLY LYS PRO GLN HIS LEU SER LYS SEQRES 2 B 15 ARG GLU HET GOL A 501 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *140(H2 O) HELIX 1 AA1 ASN A 27 LEU A 31 1 5 HELIX 2 AA2 THR A 155 HIS A 157 5 3 HELIX 3 AA3 SER A 208 VAL A 210 5 3 HELIX 4 AA4 SER A 348 ILE A 350 5 3 HELIX 5 AA5 ALA A 405 ASN A 410 1 6 SHEET 1 AA1 4 TYR A 32 ALA A 39 0 SHEET 2 AA1 4 ILE A 398 MET A 404 -1 O VAL A 401 N MET A 36 SHEET 3 AA1 4 VAL A 389 SER A 394 -1 N SER A 392 O GLN A 400 SHEET 4 AA1 4 ILE A 377 TRP A 382 -1 N SER A 381 O CYS A 391 SHEET 1 AA2 4 ALA A 47 THR A 54 0 SHEET 2 AA2 4 PHE A 61 GLY A 69 -1 O VAL A 67 N GLN A 48 SHEET 3 AA2 4 ASN A 77 PRO A 87 -1 O VAL A 80 N LEU A 68 SHEET 4 AA2 4 ILE A 115 HIS A 123 -1 O GLU A 116 N SER A 83 SHEET 1 AA3 5 ARG A 129 MET A 133 0 SHEET 2 AA3 5 ASN A 136 LYS A 143 -1 O ILE A 139 N MET A 133 SHEET 3 AA3 5 VAL A 149 ASP A 153 -1 O PHE A 152 N ILE A 140 SHEET 4 AA3 5 LEU A 171 ARG A 174 -1 O LEU A 173 N VAL A 149 SHEET 5 AA3 5 VAL A 216 ASP A 218 1 O VAL A 217 N ARG A 174 SHEET 1 AA4 4 LEU A 183 TRP A 185 0 SHEET 2 AA4 4 HIS A 192 ALA A 196 -1 O LEU A 194 N SER A 184 SHEET 3 AA4 4 ILE A 202 ASP A 206 -1 O TRP A 205 N LEU A 193 SHEET 4 AA4 4 THR A 221 PHE A 223 -1 O PHE A 223 N ILE A 202 SHEET 1 AA5 4 VAL A 230 TRP A 235 0 SHEET 2 AA5 4 LEU A 242 ALA A 247 -1 O GLY A 244 N SER A 234 SHEET 3 AA5 4 LYS A 251 ASP A 256 -1 O TRP A 255 N PHE A 243 SHEET 4 AA5 4 HIS A 267 ASP A 270 -1 O VAL A 269 N LEU A 252 SHEET 1 AA6 4 VAL A 276 PHE A 281 0 SHEET 2 AA6 4 ILE A 288 SER A 293 -1 O ALA A 290 N SER A 280 SHEET 3 AA6 4 THR A 297 ASP A 302 -1 O TRP A 301 N LEU A 289 SHEET 4 AA6 4 HIS A 311 GLU A 314 -1 O PHE A 313 N VAL A 298 SHEET 1 AA7 4 ILE A 320 TRP A 325 0 SHEET 2 AA7 4 ILE A 332 GLY A 337 -1 O ALA A 334 N GLN A 324 SHEET 3 AA7 4 LEU A 342 ASP A 346 -1 O TRP A 345 N LEU A 333 SHEET 4 AA7 4 LEU A 366 HIS A 370 -1 O HIS A 370 N LEU A 342 SITE 1 AC1 5 LEU A 45 ASN A 128 TYR A 181 SER A 378 SITE 2 AC1 5 ARG B 4 CRYST1 51.301 85.264 87.968 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019493 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011728 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011368 0.00000