HEADER HYDROLASE 22-MAY-15 4ZZJ TITLE SIRT1/ACTIVATOR/SUBSTRATE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HSIRT1,REGULATORY PROTEIN SIR2 HOMOLOG 1,SIR2-LIKE PROTEIN COMPND 5 1,HSIR2; COMPND 6 EC: 3.5.1.-; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: AC-P53; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SIRT1, SIR2L1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606 KEYWDS SIRTUIN, ACTIVATOR, DEACYLASE, COMPLEX, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.DAI REVDAT 4 15-NOV-23 4ZZJ 1 REMARK REVDAT 3 27-SEP-23 4ZZJ 1 REMARK REVDAT 2 23-SEP-15 4ZZJ 1 REMARK REVDAT 1 15-JUL-15 4ZZJ 0 JRNL AUTH H.DAI,A.W.CASE,T.V.RIERA,T.CONSIDINE,J.E.LEE,Y.HAMURO, JRNL AUTH 2 H.ZHAO,Y.JIANG,S.M.SWEITZER,B.PIETRAK,B.SCHWARTZ,C.A.BLUM, JRNL AUTH 3 J.S.DISCH,R.CALDWELL,B.SZCZEPANKIEWICZ,C.OALMANN,P.YEE NG, JRNL AUTH 4 B.H.WHITE,R.CASAUBON,R.NARAYAN,K.KOPPETSCH,F.BOURBONAIS, JRNL AUTH 5 B.WU,J.WANG,D.QIAN,F.JIANG,C.MAO,M.WANG,E.HU,J.C.WU, JRNL AUTH 6 R.B.PERNI,G.P.VLASUK,J.L.ELLIS JRNL TITL CRYSTALLOGRAPHIC STRUCTURE OF A SMALL MOLECULE SIRT1 JRNL TITL 2 ACTIVATOR-ENZYME COMPLEX. JRNL REF NAT COMMUN V. 6 7645 2015 JRNL REFN ESSN 2041-1723 JRNL PMID 26134520 JRNL DOI 10.1038/NCOMMS8645 REMARK 2 REMARK 2 RESOLUTION. 2.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 21765 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1116 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.6863 - 5.4778 0.99 2780 139 0.1804 0.2085 REMARK 3 2 5.4778 - 4.3490 1.00 2629 133 0.1445 0.1669 REMARK 3 3 4.3490 - 3.7996 1.00 2564 151 0.1451 0.2039 REMARK 3 4 3.7996 - 3.4523 1.00 2583 136 0.1845 0.2119 REMARK 3 5 3.4523 - 3.2049 0.99 2535 147 0.2179 0.2532 REMARK 3 6 3.2049 - 3.0160 0.99 2513 149 0.2476 0.2912 REMARK 3 7 3.0160 - 2.8650 0.99 2504 137 0.2667 0.3482 REMARK 3 8 2.8650 - 2.7403 0.99 2541 124 0.2725 0.3317 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2998 REMARK 3 ANGLE : 0.938 4075 REMARK 3 CHIRALITY : 0.036 444 REMARK 3 PLANARITY : 0.006 523 REMARK 3 DIHEDRAL : 14.450 1138 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 183 THROUGH 298 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5285 54.6691 10.5441 REMARK 3 T TENSOR REMARK 3 T11: 0.5961 T22: 0.5472 REMARK 3 T33: 0.5464 T12: -0.0657 REMARK 3 T13: -0.0228 T23: 0.0342 REMARK 3 L TENSOR REMARK 3 L11: 0.3298 L22: 0.9542 REMARK 3 L33: 0.5720 L12: 0.2448 REMARK 3 L13: -0.1593 L23: 0.3196 REMARK 3 S TENSOR REMARK 3 S11: -0.2036 S12: 0.2332 S13: 0.0131 REMARK 3 S21: -0.2010 S22: 0.3009 S23: 0.0657 REMARK 3 S31: -0.0108 S32: -0.0239 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 299 THROUGH 481 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0817 64.7348 30.5229 REMARK 3 T TENSOR REMARK 3 T11: 0.4627 T22: 0.3537 REMARK 3 T33: 0.4480 T12: -0.0234 REMARK 3 T13: 0.0174 T23: 0.0398 REMARK 3 L TENSOR REMARK 3 L11: 0.1078 L22: 0.7757 REMARK 3 L33: 0.4547 L12: 0.1839 REMARK 3 L13: 0.1734 L23: 0.0165 REMARK 3 S TENSOR REMARK 3 S11: -0.0366 S12: 0.0353 S13: -0.0289 REMARK 3 S21: 0.2609 S22: 0.0964 S23: 0.0097 REMARK 3 S31: -0.1040 S32: 0.0205 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 482 THROUGH 660 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7167 76.4623 10.8415 REMARK 3 T TENSOR REMARK 3 T11: 0.6476 T22: 0.5828 REMARK 3 T33: 0.5316 T12: -0.1508 REMARK 3 T13: -0.0071 T23: 0.0438 REMARK 3 L TENSOR REMARK 3 L11: 0.1632 L22: 0.0643 REMARK 3 L33: 0.1638 L12: 0.0300 REMARK 3 L13: 0.1102 L23: -0.0218 REMARK 3 S TENSOR REMARK 3 S11: -0.0046 S12: 0.2378 S13: 0.0198 REMARK 3 S21: -0.0708 S22: 0.2697 S23: -0.2363 REMARK 3 S31: -0.3520 S32: 0.0757 S33: 0.0024 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 7 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.1322 54.1362 25.1641 REMARK 3 T TENSOR REMARK 3 T11: 0.5724 T22: 0.5595 REMARK 3 T33: 0.8317 T12: -0.1533 REMARK 3 T13: -0.0690 T23: -0.0252 REMARK 3 L TENSOR REMARK 3 L11: 0.0121 L22: 0.0113 REMARK 3 L33: 0.0040 L12: -0.0012 REMARK 3 L13: -0.0054 L23: 0.0062 REMARK 3 S TENSOR REMARK 3 S11: 0.1753 S12: 0.0226 S13: -0.0786 REMARK 3 S21: -0.1429 S22: 0.1876 S23: 0.1499 REMARK 3 S31: 0.2651 S32: 0.0431 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZZJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000210083. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21821 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.740 REMARK 200 RESOLUTION RANGE LOW (A) : 91.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 9.600 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 9.90 REMARK 200 R MERGE FOR SHELL (I) : 0.82900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3GLU AND 4IG9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% V/V TACSIMATE, PH .00.1 M HEPES PH REMARK 280 7.0 AND 10% W/V PEG 5000 MME, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 47.25500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 47.25500 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 178.42000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 47.25500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 89.21000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 47.25500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 267.63000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 47.25500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 267.63000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.25500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 89.21000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 47.25500 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 47.25500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 178.42000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 47.25500 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 47.25500 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 178.42000 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 47.25500 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 267.63000 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 47.25500 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 89.21000 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 47.25500 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 89.21000 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 47.25500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 267.63000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 47.25500 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 47.25500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 178.42000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 94.51000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 631 REMARK 465 VAL A 632 REMARK 465 GLY A 633 REMARK 465 GLY A 634 REMARK 465 GLY A 635 REMARK 465 SER A 636 REMARK 465 GLY A 637 REMARK 465 SER A 661 REMARK 465 GLU A 662 REMARK 465 ASP A 663 REMARK 465 ASP A 664 REMARK 465 VAL A 665 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 216 150.58 -49.16 REMARK 500 ASN A 241 -45.78 -140.63 REMARK 500 HIS A 473 77.82 -110.27 REMARK 500 ALY B 4 107.61 -59.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 371 SG REMARK 620 2 CYS A 374 SG 109.8 REMARK 620 3 CYS A 395 SG 107.7 112.3 REMARK 620 4 CYS A 398 SG 108.1 107.0 111.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CNA A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4TQ A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 705 DBREF 4ZZJ A 183 632 UNP Q96EB6 SIR1_HUMAN 183 505 DBREF 4ZZJ B 1 7 PDB 4ZZJ 4ZZJ 1 7 SEQADV 4ZZJ GLY A 633 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ GLY A 634 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ GLY A 635 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ SER A 636 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ GLY A 637 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ GLY A 638 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ GLY A 639 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ SER A 640 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ GLN A 641 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ TYR A 642 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ LEU A 643 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ PHE A 644 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ LEU A 645 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ PRO A 646 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ PRO A 647 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ ASN A 648 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ ARG A 649 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ TYR A 650 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ ILE A 651 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ PHE A 652 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ HIS A 653 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ GLY A 654 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ ALA A 655 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ GLU A 656 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ VAL A 657 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ TYR A 658 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ SER A 659 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ ASP A 660 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ SER A 661 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ GLU A 662 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ ASP A 663 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ ASP A 664 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZJ VAL A 665 UNP Q96EB6 EXPRESSION TAG SEQRES 1 A 356 GLY PRO TYR THR PHE VAL GLN GLN HIS LEU MET ILE GLY SEQRES 2 A 356 THR ASP PRO ARG THR ILE LEU LYS ASP LEU LEU PRO GLU SEQRES 3 A 356 THR ILE PRO PRO PRO GLU LEU ASP ASP MET THR LEU TRP SEQRES 4 A 356 GLN ILE VAL ILE ASN ILE LEU SER GLU PRO PRO LYS ARG SEQRES 5 A 356 LYS LYS ARG LYS ASP ILE ASN THR ILE GLU ASP ALA VAL SEQRES 6 A 356 LYS LEU LEU GLN GLU CYS LYS LYS ILE ILE VAL LEU THR SEQRES 7 A 356 GLY ALA GLY VAL SER VAL SER CYS GLY ILE PRO ASP PHE SEQRES 8 A 356 ARG SER ARG ASP GLY ILE TYR ALA ARG LEU ALA VAL ASP SEQRES 9 A 356 PHE PRO ASP LEU PRO ASP PRO GLN ALA MET PHE ASP ILE SEQRES 10 A 356 GLU TYR PHE ARG LYS ASP PRO ARG PRO PHE PHE LYS PHE SEQRES 11 A 356 ALA LYS GLU ILE TYR PRO GLY GLN PHE GLN PRO SER LEU SEQRES 12 A 356 CYS HIS LYS PHE ILE ALA LEU SER ASP LYS GLU GLY LYS SEQRES 13 A 356 LEU LEU ARG ASN TYR THR GLN ASN ILE ASP THR LEU GLU SEQRES 14 A 356 GLN VAL ALA GLY ILE GLN ARG ILE ILE GLN CYS HIS GLY SEQRES 15 A 356 SER PHE ALA THR ALA SER CYS LEU ILE CYS LYS TYR LYS SEQRES 16 A 356 VAL ASP CYS GLU ALA VAL ARG GLY ASP ILE PHE ASN GLN SEQRES 17 A 356 VAL VAL PRO ARG CYS PRO ARG CYS PRO ALA ASP GLU PRO SEQRES 18 A 356 LEU ALA ILE MET LYS PRO GLU ILE VAL PHE PHE GLY GLU SEQRES 19 A 356 ASN LEU PRO GLU GLN PHE HIS ARG ALA MET LYS TYR ASP SEQRES 20 A 356 LYS ASP GLU VAL ASP LEU LEU ILE VAL ILE GLY SER SER SEQRES 21 A 356 LEU LYS VAL ARG PRO VAL ALA LEU ILE PRO SER SER ILE SEQRES 22 A 356 PRO HIS GLU VAL PRO GLN ILE LEU ILE ASN ARG GLU PRO SEQRES 23 A 356 LEU PRO HIS LEU HIS PHE ASP VAL GLU LEU LEU GLY ASP SEQRES 24 A 356 CYS ASP VAL ILE ILE ASN GLU LEU CYS HIS ARG LEU GLY SEQRES 25 A 356 GLY GLU TYR ALA LYS LEU CYS CYS ASN PRO VAL GLY GLY SEQRES 26 A 356 GLY SER GLY GLY GLY SER GLN TYR LEU PHE LEU PRO PRO SEQRES 27 A 356 ASN ARG TYR ILE PHE HIS GLY ALA GLU VAL TYR SER ASP SEQRES 28 A 356 SER GLU ASP ASP VAL SEQRES 1 B 7 ARG HIS LYS ALY LEU NLE PHE HET ALY B 4 12 HET NLE B 6 8 HET ZN A 701 1 HET CNA A 702 44 HET 4TQ A 703 36 HET GOL A 704 6 HET GOL A 705 6 HETNAM ALY N(6)-ACETYLLYSINE HETNAM NLE NORLEUCINE HETNAM ZN ZINC ION HETNAM CNA CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 4TQ (3S)-1,3-DIMETHYL-N-[3-(1,3-OXAZOL-5-YL)PHENYL]-6-[3- HETNAM 2 4TQ (TRIFLUOROMETHYL)PHENYL]-2,3-DIHYDROPYRIDO[2,3- HETNAM 3 4TQ B]PYRAZINE-4(1H)-CARBOXAMIDE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ALY C8 H16 N2 O3 FORMUL 2 NLE C6 H13 N O2 FORMUL 3 ZN ZN 2+ FORMUL 4 CNA C22 H30 N7 O13 P2 1+ FORMUL 5 4TQ C26 H22 F3 N5 O2 FORMUL 6 GOL 2(C3 H8 O3) FORMUL 8 HOH *44(H2 O) HELIX 1 AA1 GLY A 183 MET A 193 1 11 HELIX 2 AA2 ASP A 197 LEU A 206 1 10 HELIX 3 AA3 ASP A 216 SER A 229 1 14 HELIX 4 AA4 THR A 242 CYS A 253 1 12 HELIX 5 AA5 ALA A 262 GLY A 269 5 8 HELIX 6 AA6 ILE A 279 PHE A 287 1 9 HELIX 7 AA7 ASP A 292 PHE A 297 5 6 HELIX 8 AA8 ASP A 298 ASP A 305 1 8 HELIX 9 AA9 PRO A 306 TYR A 317 1 12 HELIX 10 AB1 SER A 324 GLU A 336 1 13 HELIX 11 AB2 THR A 349 GLY A 355 1 7 HELIX 12 AB3 CYS A 380 ASN A 389 1 10 HELIX 13 AB4 PRO A 419 LYS A 430 1 12 HELIX 14 AB5 PRO A 447 ALA A 449 5 3 HELIX 15 AB6 LEU A 450 ILE A 455 1 6 HELIX 16 AB7 ASP A 481 GLY A 494 1 14 HELIX 17 AB8 GLY A 494 LYS A 499 1 6 SHEET 1 AA1 8 ILE A 359 GLN A 361 0 SHEET 2 AA1 8 LEU A 339 THR A 344 1 N THR A 344 O ILE A 360 SHEET 3 AA1 8 ILE A 256 THR A 260 1 N VAL A 258 O ARG A 341 SHEET 4 AA1 8 LEU A 435 ILE A 439 1 O ILE A 437 N LEU A 259 SHEET 5 AA1 8 GLN A 461 ASN A 465 1 O ILE A 464 N VAL A 438 SHEET 6 AA1 8 VAL A 476 LEU A 479 1 O LEU A 478 N LEU A 463 SHEET 7 AA1 8 ARG A 649 ILE A 651 1 O TYR A 650 N LEU A 479 SHEET 8 AA1 8 LEU A 643 LEU A 645 -1 N LEU A 645 O ARG A 649 SHEET 1 AA2 3 LYS A 377 ASP A 379 0 SHEET 2 AA2 3 GLY A 364 CYS A 371 -1 N ALA A 369 O VAL A 378 SHEET 3 AA2 3 MET A 407 ILE A 411 -1 O LYS A 408 N SER A 370 SHEET 1 AA3 2 VAL A 445 ARG A 446 0 SHEET 2 AA3 2 LEU B 5 NLE B 6 -1 O LEU B 5 N ARG A 446 LINK C LYS B 3 N ALY B 4 1555 1555 1.33 LINK C ALY B 4 N LEU B 5 1555 1555 1.33 LINK C LEU B 5 N NLE B 6 1555 1555 1.33 LINK C NLE B 6 N PHE B 7 1555 1555 1.33 LINK SG CYS A 371 ZN ZN A 701 1555 1555 2.37 LINK SG CYS A 374 ZN ZN A 701 1555 1555 2.22 LINK SG CYS A 395 ZN ZN A 701 1555 1555 2.22 LINK SG CYS A 398 ZN ZN A 701 1555 1555 2.26 CISPEP 1 ARG A 446 PRO A 447 0 1.04 CISPEP 2 PRO A 646 PRO A 647 0 1.95 SITE 1 AC1 4 CYS A 371 CYS A 374 CYS A 395 CYS A 398 SITE 1 AC2 27 GLY A 261 ALA A 262 GLY A 263 VAL A 266 SITE 2 AC2 27 ILE A 270 PRO A 271 ASP A 272 PHE A 273 SITE 3 AC2 27 ARG A 274 PHE A 297 ILE A 316 GLN A 345 SITE 4 AC2 27 ASN A 346 ILE A 347 ASP A 348 GLY A 440 SITE 5 AC2 27 SER A 441 SER A 442 ASN A 465 ARG A 466 SITE 6 AC2 27 GLU A 467 GLY A 480 ASP A 481 CYS A 482 SITE 7 AC2 27 HOH A 809 HOH A 813 ALY B 4 SITE 1 AC3 9 LEU A 206 THR A 209 PRO A 211 PRO A 212 SITE 2 AC3 9 GLN A 222 ILE A 223 ASN A 226 ILE A 227 SITE 3 AC3 9 GLU A 230 SITE 1 AC4 5 VAL A 353 ALA A 382 VAL A 383 ASP A 386 SITE 2 AC4 5 PRO A 396 SITE 1 AC5 4 PHE A 422 HIS A 423 LEU A 450 SER A 454 CRYST1 94.510 94.510 356.840 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010581 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010581 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002802 0.00000