HEADER TRANSFERASE/SUBSTRATE 06-OCT-13 4N39 TITLE CRYSTAL STRUCTURE OF HUMAN O-GLCNAC TRANSFERASE BOUND TO A PEPTIDE TITLE 2 FROM HCF-1 PRO-REPEAT 2 (11-26) COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N- COMPND 3 ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNIT; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: UNP RESIDUES 323-1041; COMPND 6 SYNONYM: O-GLCNAC TRANSFERASE SUBUNIT P110, O-LINKED N- COMPND 7 ACETYLGLUCOSAMINE TRANSFERASE 110 KDA SUBUNIT, OGT; COMPND 8 EC: 2.4.1.255; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: HOST CELL FACTOR 1; COMPND 12 CHAIN: B; COMPND 13 FRAGMENT: UNP RESIDUES 1082-1097; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: OGT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET23; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS GLYCOSYLTRANSFERASE, O-GLCNAC TRANSFERASE, PROTEOLYSIS SUBSTRATE, TPR KEYWDS 2 DOMAIN, TPR BINDING, TRANSFERASE-SUBSTRATE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.B.LAZARUS,W.HERR,S.WALKER REVDAT 2 28-FEB-24 4N39 1 REMARK SEQADV REVDAT 1 01-JAN-14 4N39 0 JRNL AUTH M.B.LAZARUS,J.JIANG,V.KAPURIA,T.BHUIYAN,J.JANETZKO, JRNL AUTH 2 W.F.ZANDBERG,D.J.VOCADLO,W.HERR,S.WALKER JRNL TITL HCF-1 IS CLEAVED IN THE ACTIVE SITE OF O-GLCNAC TRANSFERASE. JRNL REF SCIENCE V. 342 1235 2013 JRNL REFN ISSN 0036-8075 JRNL PMID 24311690 JRNL DOI 10.1126/SCIENCE.1243990 REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 77296 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 3911 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.1215 - 5.3372 0.93 2618 138 0.1921 0.2042 REMARK 3 2 5.3372 - 4.2391 1.00 2737 121 0.1431 0.1545 REMARK 3 3 4.2391 - 3.7041 0.98 2635 151 0.1343 0.1567 REMARK 3 4 3.7041 - 3.3657 1.00 2622 164 0.1467 0.1752 REMARK 3 5 3.3657 - 3.1247 1.00 2655 141 0.1626 0.1727 REMARK 3 6 3.1247 - 2.9406 1.00 2628 143 0.1658 0.2068 REMARK 3 7 2.9406 - 2.7934 1.00 2640 137 0.1821 0.2061 REMARK 3 8 2.7934 - 2.6719 1.00 2634 154 0.1849 0.2297 REMARK 3 9 2.6719 - 2.5690 1.00 2634 126 0.1853 0.2142 REMARK 3 10 2.5690 - 2.4804 1.00 2630 134 0.1846 0.2141 REMARK 3 11 2.4804 - 2.4029 1.00 2624 149 0.1836 0.2086 REMARK 3 12 2.4029 - 2.3342 1.00 2630 134 0.1872 0.2260 REMARK 3 13 2.3342 - 2.2728 1.00 2630 126 0.1881 0.2050 REMARK 3 14 2.2728 - 2.2173 1.00 2619 138 0.2099 0.2532 REMARK 3 15 2.2173 - 2.1670 1.00 2633 122 0.1965 0.2389 REMARK 3 16 2.1670 - 2.1208 0.99 2584 145 0.2848 0.3520 REMARK 3 17 2.1208 - 2.0784 1.00 2627 145 0.2499 0.3245 REMARK 3 18 2.0784 - 2.0392 0.99 2586 142 0.2323 0.3044 REMARK 3 19 2.0392 - 2.0028 1.00 2619 123 0.2015 0.2586 REMARK 3 20 2.0028 - 1.9689 1.00 2622 129 0.2082 0.2427 REMARK 3 21 1.9689 - 1.9371 1.00 2583 149 0.2344 0.2510 REMARK 3 22 1.9371 - 1.9073 0.99 2559 134 0.2986 0.3118 REMARK 3 23 1.9073 - 1.8792 1.00 2652 138 0.2580 0.2652 REMARK 3 24 1.8792 - 1.8528 1.00 2601 150 0.2797 0.2855 REMARK 3 25 1.8528 - 1.8277 1.00 2551 149 0.2800 0.2931 REMARK 3 26 1.8277 - 1.8040 1.00 2587 146 0.2540 0.2586 REMARK 3 27 1.8040 - 1.7815 1.00 2633 151 0.2575 0.3106 REMARK 3 28 1.7815 - 1.7600 1.00 2612 132 0.2698 0.2852 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.78 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 5755 REMARK 3 ANGLE : 0.899 7818 REMARK 3 CHIRALITY : 0.061 869 REMARK 3 PLANARITY : 0.004 1014 REMARK 3 DIHEDRAL : 12.721 2155 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 313:341) REMARK 3 ORIGIN FOR THE GROUP (A): -45.1013 34.6018 29.8725 REMARK 3 T TENSOR REMARK 3 T11: 0.3368 T22: 0.1338 REMARK 3 T33: 0.2414 T12: -0.0332 REMARK 3 T13: 0.0319 T23: 0.0367 REMARK 3 L TENSOR REMARK 3 L11: 4.2920 L22: 3.5127 REMARK 3 L33: 7.6681 L12: -0.9973 REMARK 3 L13: -1.0917 L23: -2.2899 REMARK 3 S TENSOR REMARK 3 S11: 0.1299 S12: 0.2489 S13: 0.3446 REMARK 3 S21: -0.4468 S22: 0.1038 S23: -0.0460 REMARK 3 S31: -0.5434 S32: -0.0245 S33: -0.1920 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 342:382) REMARK 3 ORIGIN FOR THE GROUP (A): -40.7121 24.4077 35.4515 REMARK 3 T TENSOR REMARK 3 T11: 0.1615 T22: 0.1300 REMARK 3 T33: 0.1257 T12: -0.0254 REMARK 3 T13: -0.0273 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 4.5167 L22: 3.6447 REMARK 3 L33: 3.4138 L12: -0.7657 REMARK 3 L13: -1.9433 L23: 0.2806 REMARK 3 S TENSOR REMARK 3 S11: 0.0072 S12: -0.1268 S13: 0.1877 REMARK 3 S21: 0.2515 S22: 0.1415 S23: -0.1784 REMARK 3 S31: -0.1351 S32: 0.2488 S33: -0.1578 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 383:429) REMARK 3 ORIGIN FOR THE GROUP (A): -46.4241 11.3671 27.9901 REMARK 3 T TENSOR REMARK 3 T11: 0.1897 T22: 0.1209 REMARK 3 T33: 0.1011 T12: -0.0272 REMARK 3 T13: -0.0136 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 3.3965 L22: 3.3025 REMARK 3 L33: 4.4611 L12: -0.1282 REMARK 3 L13: 0.7090 L23: 0.3162 REMARK 3 S TENSOR REMARK 3 S11: 0.1496 S12: -0.0907 S13: -0.1096 REMARK 3 S21: 0.2292 S22: -0.1870 S23: -0.1821 REMARK 3 S31: 0.3653 S32: 0.0725 S33: 0.0455 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 430:474) REMARK 3 ORIGIN FOR THE GROUP (A): -52.6231 9.5514 10.8084 REMARK 3 T TENSOR REMARK 3 T11: 0.1480 T22: 0.1222 REMARK 3 T33: 0.0988 T12: -0.0050 REMARK 3 T13: 0.0116 T23: 0.0105 REMARK 3 L TENSOR REMARK 3 L11: 2.3082 L22: 4.0802 REMARK 3 L33: 4.8533 L12: -0.0030 REMARK 3 L13: -1.2693 L23: 1.7550 REMARK 3 S TENSOR REMARK 3 S11: -0.1103 S12: 0.0063 S13: -0.1150 REMARK 3 S21: 0.1590 S22: -0.0055 S23: 0.0368 REMARK 3 S31: 0.3268 S32: -0.1406 S33: 0.1224 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 475:518) REMARK 3 ORIGIN FOR THE GROUP (A): -45.5189 22.3128 4.8481 REMARK 3 T TENSOR REMARK 3 T11: 0.1705 T22: 0.0946 REMARK 3 T33: 0.1230 T12: 0.0285 REMARK 3 T13: 0.0004 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 5.4481 L22: 4.5065 REMARK 3 L33: 3.7339 L12: 1.6017 REMARK 3 L13: 0.6806 L23: -0.6567 REMARK 3 S TENSOR REMARK 3 S11: -0.0793 S12: -0.1059 S13: 0.2397 REMARK 3 S21: -0.0480 S22: 0.1435 S23: 0.0164 REMARK 3 S31: -0.1854 S32: -0.1102 S33: -0.0591 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 519:654) REMARK 3 ORIGIN FOR THE GROUP (A): -17.6453 16.4767 9.9285 REMARK 3 T TENSOR REMARK 3 T11: 0.1497 T22: 0.2436 REMARK 3 T33: 0.2643 T12: 0.0330 REMARK 3 T13: -0.0434 T23: -0.0605 REMARK 3 L TENSOR REMARK 3 L11: 0.9335 L22: 1.8348 REMARK 3 L33: 1.4987 L12: -0.2229 REMARK 3 L13: -0.0393 L23: 0.5568 REMARK 3 S TENSOR REMARK 3 S11: 0.0267 S12: -0.0997 S13: -0.0063 REMARK 3 S21: 0.1851 S22: 0.1653 S23: -0.4546 REMARK 3 S31: 0.0841 S32: 0.4025 S33: -0.1668 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 655:706) REMARK 3 ORIGIN FOR THE GROUP (A): -26.3665 15.2674 -5.3033 REMARK 3 T TENSOR REMARK 3 T11: 0.1082 T22: 0.1523 REMARK 3 T33: 0.1623 T12: -0.0102 REMARK 3 T13: 0.0069 T23: -0.0253 REMARK 3 L TENSOR REMARK 3 L11: 0.6800 L22: 6.3837 REMARK 3 L33: 1.2386 L12: -0.8851 REMARK 3 L13: -0.5780 L23: 1.1104 REMARK 3 S TENSOR REMARK 3 S11: 0.0261 S12: 0.0841 S13: 0.0842 REMARK 3 S21: -0.3087 S22: 0.1001 S23: -0.4131 REMARK 3 S31: -0.0090 S32: 0.0743 S33: -0.1417 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 707:742) REMARK 3 ORIGIN FOR THE GROUP (A): -24.1898 -20.8143 -14.9841 REMARK 3 T TENSOR REMARK 3 T11: 0.3460 T22: 0.2316 REMARK 3 T33: 0.2748 T12: 0.0140 REMARK 3 T13: 0.1362 T23: -0.0764 REMARK 3 L TENSOR REMARK 3 L11: 3.4148 L22: 4.1354 REMARK 3 L33: 2.0119 L12: -3.5815 REMARK 3 L13: -1.0564 L23: 0.2952 REMARK 3 S TENSOR REMARK 3 S11: -0.1641 S12: 0.4498 S13: -0.3604 REMARK 3 S21: -0.2477 S22: -0.0378 S23: -0.1575 REMARK 3 S31: 0.4833 S32: 0.1666 S33: 0.0816 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 743:784) REMARK 3 ORIGIN FOR THE GROUP (A): -27.3015 -24.6966 -12.9840 REMARK 3 T TENSOR REMARK 3 T11: 0.3963 T22: 0.1974 REMARK 3 T33: 0.3437 T12: 0.0326 REMARK 3 T13: 0.1000 T23: -0.0833 REMARK 3 L TENSOR REMARK 3 L11: 4.9485 L22: 1.9251 REMARK 3 L33: 8.4317 L12: -2.5814 REMARK 3 L13: -2.6057 L23: 0.7869 REMARK 3 S TENSOR REMARK 3 S11: 0.0006 S12: 0.1793 S13: -0.2984 REMARK 3 S21: -0.1169 S22: 0.1304 S23: 0.1715 REMARK 3 S31: 0.5300 S32: 0.0092 S33: -0.1206 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 785:849) REMARK 3 ORIGIN FOR THE GROUP (A): -31.8559 -12.7060 -3.1110 REMARK 3 T TENSOR REMARK 3 T11: 0.2951 T22: 0.1625 REMARK 3 T33: 0.1453 T12: 0.0378 REMARK 3 T13: 0.0527 T23: -0.0200 REMARK 3 L TENSOR REMARK 3 L11: 1.5795 L22: 2.7234 REMARK 3 L33: 0.9388 L12: -1.2360 REMARK 3 L13: -0.3179 L23: 0.3511 REMARK 3 S TENSOR REMARK 3 S11: -0.2076 S12: -0.0859 S13: -0.1627 REMARK 3 S21: 0.2633 S22: 0.1689 S23: -0.1144 REMARK 3 S31: 0.3388 S32: 0.1991 S33: 0.0350 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN A AND RESID 850:876) REMARK 3 ORIGIN FOR THE GROUP (A): -47.3759 -4.7444 -7.6240 REMARK 3 T TENSOR REMARK 3 T11: 0.1905 T22: 0.1131 REMARK 3 T33: 0.1855 T12: -0.0608 REMARK 3 T13: 0.0393 T23: -0.0426 REMARK 3 L TENSOR REMARK 3 L11: 3.0144 L22: 1.8320 REMARK 3 L33: 3.2102 L12: -0.2699 REMARK 3 L13: 1.0729 L23: -0.8286 REMARK 3 S TENSOR REMARK 3 S11: -0.0284 S12: 0.2485 S13: -0.1278 REMARK 3 S21: -0.0402 S22: 0.0216 S23: 0.1738 REMARK 3 S31: 0.4097 S32: -0.1258 S33: 0.0429 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN A AND RESID 877:1003) REMARK 3 ORIGIN FOR THE GROUP (A): -35.3579 0.1038 -12.5048 REMARK 3 T TENSOR REMARK 3 T11: 0.1905 T22: 0.1340 REMARK 3 T33: 0.1130 T12: -0.0109 REMARK 3 T13: 0.0403 T23: -0.0183 REMARK 3 L TENSOR REMARK 3 L11: 0.9660 L22: 2.0594 REMARK 3 L33: 1.1128 L12: -0.0516 REMARK 3 L13: 0.0870 L23: 0.4563 REMARK 3 S TENSOR REMARK 3 S11: -0.0884 S12: 0.1786 S13: -0.0586 REMARK 3 S21: -0.2006 S22: 0.0574 S23: -0.0665 REMARK 3 S31: 0.1233 S32: 0.0225 S33: 0.0304 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN A AND RESID 1004:1028) REMARK 3 ORIGIN FOR THE GROUP (A): -15.3736 25.4230 -5.8920 REMARK 3 T TENSOR REMARK 3 T11: 0.2352 T22: 0.2856 REMARK 3 T33: 0.3301 T12: -0.0552 REMARK 3 T13: 0.1246 T23: -0.0655 REMARK 3 L TENSOR REMARK 3 L11: 3.5886 L22: 4.1925 REMARK 3 L33: 0.6212 L12: 0.2983 REMARK 3 L13: 0.9779 L23: -1.1815 REMARK 3 S TENSOR REMARK 3 S11: 0.1388 S12: 0.3476 S13: -0.0660 REMARK 3 S21: -0.4510 S22: 0.0240 S23: -0.7027 REMARK 3 S31: -0.2677 S32: 0.3865 S33: -0.1364 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4N39 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1000082696. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.16 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 77414 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 87.616 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09300 REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.62800 REMARK 200 R SYM FOR SHELL (I) : 0.62800 REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M POTASSIUM SODIUM TARTRATE, 0.1M REMARK 280 TRIS, PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.82000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.91000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 43.91000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 87.82000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1395 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1584 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1740 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 309 REMARK 465 PRO A 310 REMARK 465 GLY A 311 REMARK 465 SER A 312 REMARK 465 SER A 715 REMARK 465 ASN A 716 REMARK 465 GLY A 717 REMARK 465 HIS A 718 REMARK 465 LYS A 747 REMARK 465 CYS A 748 REMARK 465 PRO A 749 REMARK 465 ASP A 750 REMARK 465 GLY A 751 REMARK 465 GLY A 752 REMARK 465 ASP A 753 REMARK 465 ASN A 754 REMARK 465 ALA A 755 REMARK 465 ASP A 756 REMARK 465 SER A 757 REMARK 465 SER A 758 REMARK 465 ASN A 759 REMARK 465 THR A 760 REMARK 465 ALA A 761 REMARK 465 PRO A 1029 REMARK 465 VAL A 1030 REMARK 465 GLU A 1031 REMARK 465 THR B 11 REMARK 465 HIS B 12 REMARK 465 ALA B 23 REMARK 465 THR B 24 REMARK 465 SER B 25 REMARK 465 ASN B 26 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 778 NH1 ARG A 782 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 349 33.17 -91.82 REMARK 500 LEU A 653 -47.28 80.11 REMARK 500 THR A 669 -151.56 -150.87 REMARK 500 HIS A 691 -85.71 -119.31 REMARK 500 ASN A 722 28.80 -147.57 REMARK 500 ASN A 770 -168.07 -103.04 REMARK 500 ASN A 804 101.50 -160.45 REMARK 500 HIS A 920 -84.84 -110.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP A 1201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4N3A RELATED DB: PDB REMARK 900 RELATED ID: 4N3B RELATED DB: PDB REMARK 900 RELATED ID: 4N3C RELATED DB: PDB DBREF 4N39 A 313 1031 UNP O15294 OGT1_HUMAN 323 1041 DBREF 4N39 B 11 26 UNP P51610 HCFC1_HUMAN 1082 1097 SEQADV 4N39 GLY A 309 UNP O15294 EXPRESSION TAG SEQADV 4N39 PRO A 310 UNP O15294 EXPRESSION TAG SEQADV 4N39 GLY A 311 UNP O15294 EXPRESSION TAG SEQADV 4N39 SER A 312 UNP O15294 EXPRESSION TAG SEQRES 1 A 723 GLY PRO GLY SER CYS PRO THR HIS ALA ASP SER LEU ASN SEQRES 2 A 723 ASN LEU ALA ASN ILE LYS ARG GLU GLN GLY ASN ILE GLU SEQRES 3 A 723 GLU ALA VAL ARG LEU TYR ARG LYS ALA LEU GLU VAL PHE SEQRES 4 A 723 PRO GLU PHE ALA ALA ALA HIS SER ASN LEU ALA SER VAL SEQRES 5 A 723 LEU GLN GLN GLN GLY LYS LEU GLN GLU ALA LEU MET HIS SEQRES 6 A 723 TYR LYS GLU ALA ILE ARG ILE SER PRO THR PHE ALA ASP SEQRES 7 A 723 ALA TYR SER ASN MET GLY ASN THR LEU LYS GLU MET GLN SEQRES 8 A 723 ASP VAL GLN GLY ALA LEU GLN CYS TYR THR ARG ALA ILE SEQRES 9 A 723 GLN ILE ASN PRO ALA PHE ALA ASP ALA HIS SER ASN LEU SEQRES 10 A 723 ALA SER ILE HIS LYS ASP SER GLY ASN ILE PRO GLU ALA SEQRES 11 A 723 ILE ALA SER TYR ARG THR ALA LEU LYS LEU LYS PRO ASP SEQRES 12 A 723 PHE PRO ASP ALA TYR CYS ASN LEU ALA HIS CYS LEU GLN SEQRES 13 A 723 ILE VAL CYS ASP TRP THR ASP TYR ASP GLU ARG MET LYS SEQRES 14 A 723 LYS LEU VAL SER ILE VAL ALA ASP GLN LEU GLU LYS ASN SEQRES 15 A 723 ARG LEU PRO SER VAL HIS PRO HIS HIS SER MET LEU TYR SEQRES 16 A 723 PRO LEU SER HIS GLY PHE ARG LYS ALA ILE ALA GLU ARG SEQRES 17 A 723 HIS GLY ASN LEU CYS LEU ASP LYS ILE ASN VAL LEU HIS SEQRES 18 A 723 LYS PRO PRO TYR GLU HIS PRO LYS ASP LEU LYS LEU SER SEQRES 19 A 723 ASP GLY ARG LEU ARG VAL GLY TYR VAL SER SER ASP PHE SEQRES 20 A 723 GLY ASN HIS PRO THR SER HIS LEU MET GLN SER ILE PRO SEQRES 21 A 723 GLY MET HIS ASN PRO ASP LYS PHE GLU VAL PHE CYS TYR SEQRES 22 A 723 ALA LEU SER PRO ASP ASP GLY THR ASN PHE ARG VAL LYS SEQRES 23 A 723 VAL MET ALA GLU ALA ASN HIS PHE ILE ASP LEU SER GLN SEQRES 24 A 723 ILE PRO CYS ASN GLY LYS ALA ALA ASP ARG ILE HIS GLN SEQRES 25 A 723 ASP GLY ILE HIS ILE LEU VAL ASN MET ASN GLY TYR THR SEQRES 26 A 723 LYS GLY ALA ARG ASN GLU LEU PHE ALA LEU ARG PRO ALA SEQRES 27 A 723 PRO ILE GLN ALA MET TRP LEU GLY TYR PRO GLY THR SER SEQRES 28 A 723 GLY ALA LEU PHE MET ASP TYR ILE ILE THR ASP GLN GLU SEQRES 29 A 723 THR SER PRO ALA GLU VAL ALA GLU GLN TYR SER GLU LYS SEQRES 30 A 723 LEU ALA TYR MET PRO HIS THR PHE PHE ILE GLY ASP HIS SEQRES 31 A 723 ALA ASN MET PHE PRO HIS LEU LYS LYS LYS ALA VAL ILE SEQRES 32 A 723 ASP PHE LYS SER ASN GLY HIS ILE TYR ASP ASN ARG ILE SEQRES 33 A 723 VAL LEU ASN GLY ILE ASP LEU LYS ALA PHE LEU ASP SER SEQRES 34 A 723 LEU PRO ASP VAL LYS ILE VAL LYS MET LYS CYS PRO ASP SEQRES 35 A 723 GLY GLY ASP ASN ALA ASP SER SER ASN THR ALA LEU ASN SEQRES 36 A 723 MET PRO VAL ILE PRO MET ASN THR ILE ALA GLU ALA VAL SEQRES 37 A 723 ILE GLU MET ILE ASN ARG GLY GLN ILE GLN ILE THR ILE SEQRES 38 A 723 ASN GLY PHE SER ILE SER ASN GLY LEU ALA THR THR GLN SEQRES 39 A 723 ILE ASN ASN LYS ALA ALA THR GLY GLU GLU VAL PRO ARG SEQRES 40 A 723 THR ILE ILE VAL THR THR ARG SER GLN TYR GLY LEU PRO SEQRES 41 A 723 GLU ASP ALA ILE VAL TYR CYS ASN PHE ASN GLN LEU TYR SEQRES 42 A 723 LYS ILE ASP PRO SER THR LEU GLN MET TRP ALA ASN ILE SEQRES 43 A 723 LEU LYS ARG VAL PRO ASN SER VAL LEU TRP LEU LEU ARG SEQRES 44 A 723 PHE PRO ALA VAL GLY GLU PRO ASN ILE GLN GLN TYR ALA SEQRES 45 A 723 GLN ASN MET GLY LEU PRO GLN ASN ARG ILE ILE PHE SER SEQRES 46 A 723 PRO VAL ALA PRO LYS GLU GLU HIS VAL ARG ARG GLY GLN SEQRES 47 A 723 LEU ALA ASP VAL CYS LEU ASP THR PRO LEU CYS ASN GLY SEQRES 48 A 723 HIS THR THR GLY MET ASP VAL LEU TRP ALA GLY THR PRO SEQRES 49 A 723 MET VAL THR MET PRO GLY GLU THR LEU ALA SER ARG VAL SEQRES 50 A 723 ALA ALA SER GLN LEU THR CYS LEU GLY CYS LEU GLU LEU SEQRES 51 A 723 ILE ALA LYS ASN ARG GLN GLU TYR GLU ASP ILE ALA VAL SEQRES 52 A 723 LYS LEU GLY THR ASP LEU GLU TYR LEU LYS LYS VAL ARG SEQRES 53 A 723 GLY LYS VAL TRP LYS GLN ARG ILE SER SER PRO LEU PHE SEQRES 54 A 723 ASN THR LYS GLN TYR THR MET GLU LEU GLU ARG LEU TYR SEQRES 55 A 723 LEU GLN MET TRP GLU HIS TYR ALA ALA GLY ASN LYS PRO SEQRES 56 A 723 ASP HIS MET ILE LYS PRO VAL GLU SEQRES 1 B 16 THR HIS GLU THR GLY THR THR ASN THR ALA THR THR ALA SEQRES 2 B 16 THR SER ASN HET UDP A1201 25 HETNAM UDP URIDINE-5'-DIPHOSPHATE FORMUL 3 UDP C9 H14 N2 O12 P2 FORMUL 4 HOH *551(H2 O) HELIX 1 1 CYS A 313 GLN A 330 1 18 HELIX 2 2 ASN A 332 PHE A 347 1 16 HELIX 3 3 PHE A 350 GLN A 364 1 15 HELIX 4 4 LYS A 366 SER A 381 1 16 HELIX 5 5 PHE A 384 MET A 398 1 15 HELIX 6 6 ASP A 400 ASN A 415 1 16 HELIX 7 7 PHE A 418 GLY A 433 1 16 HELIX 8 8 ASN A 434 LYS A 449 1 16 HELIX 9 9 PHE A 452 VAL A 466 1 15 HELIX 10 10 ASP A 471 LYS A 489 1 19 HELIX 11 11 HIS A 496 TYR A 503 5 8 HELIX 12 12 SER A 506 VAL A 527 1 22 HELIX 13 13 LEU A 539 ASP A 543 5 5 HELIX 14 14 HIS A 558 GLN A 565 1 8 HELIX 15 15 SER A 566 HIS A 571 1 6 HELIX 16 16 THR A 589 ALA A 599 1 11 HELIX 17 17 SER A 606 ILE A 608 5 3 HELIX 18 18 CYS A 610 ASP A 621 1 12 HELIX 19 19 ASN A 638 LEU A 643 1 6 HELIX 20 20 PRO A 675 TYR A 682 5 8 HELIX 21 21 ASP A 697 PHE A 702 1 6 HELIX 22 22 PRO A 703 LYS A 706 5 4 HELIX 23 23 ASP A 730 SER A 737 1 8 HELIX 24 24 ASN A 770 ARG A 782 1 13 HELIX 25 25 ALA A 799 ASN A 804 1 6 HELIX 26 26 ASN A 804 THR A 809 1 6 HELIX 27 27 SER A 823 GLY A 826 5 4 HELIX 28 28 GLN A 839 ILE A 843 5 5 HELIX 29 29 ASP A 844 VAL A 858 1 15 HELIX 30 30 PRO A 869 VAL A 871 5 3 HELIX 31 31 GLY A 872 MET A 883 1 12 HELIX 32 32 PRO A 886 ASN A 888 5 3 HELIX 33 33 PRO A 897 GLY A 905 1 9 HELIX 34 34 GLN A 906 ALA A 908 5 3 HELIX 35 35 HIS A 920 ALA A 929 1 10 HELIX 36 36 THR A 940 SER A 943 5 4 HELIX 37 37 ARG A 944 GLY A 954 1 11 HELIX 38 38 CYS A 955 ILE A 959 5 5 HELIX 39 39 ASN A 962 ASP A 976 1 15 HELIX 40 40 ASP A 976 SER A 994 1 19 HELIX 41 41 ASN A 998 ALA A 1019 1 22 SHEET 1 A 7 HIS A 601 ASP A 604 0 SHEET 2 A 7 PHE A 576 ALA A 582 1 N CYS A 580 O ILE A 603 SHEET 3 A 7 LEU A 546 SER A 552 1 N TYR A 550 O TYR A 581 SHEET 4 A 7 ILE A 625 ASN A 628 1 O VAL A 627 N GLY A 549 SHEET 5 A 7 ILE A 648 MET A 651 1 O ALA A 650 N ASN A 628 SHEET 6 A 7 TYR A 666 THR A 669 1 O TYR A 666 N MET A 651 SHEET 7 A 7 LYS A 685 TYR A 688 1 O ALA A 687 N ILE A 667 SHEET 1 B 7 LYS A 742 VAL A 744 0 SHEET 2 B 7 MET A 764 ILE A 767 -1 O VAL A 766 N LYS A 742 SHEET 3 B 7 ALA A 709 ILE A 711 1 N VAL A 710 O ILE A 767 SHEET 4 B 7 ILE A 724 ASN A 727 -1 O LEU A 726 N ALA A 709 SHEET 5 B 7 ILE A 817 THR A 821 -1 O ILE A 818 N ASN A 727 SHEET 6 B 7 PHE A 792 ASN A 796 1 N SER A 795 O ILE A 817 SHEET 7 B 7 GLN A 786 ILE A 789 -1 N ILE A 787 O ILE A 794 SHEET 1 C 5 ILE A 890 PRO A 894 0 SHEET 2 C 5 SER A 861 ARG A 867 1 N LEU A 863 O ILE A 891 SHEET 3 C 5 ILE A 832 CYS A 835 1 N TYR A 834 O TRP A 864 SHEET 4 C 5 VAL A 910 LEU A 912 1 O LEU A 912 N CYS A 835 SHEET 5 C 5 MET A 933 VAL A 934 1 O VAL A 934 N CYS A 911 CISPEP 1 PHE A 868 PRO A 869 0 4.58 SITE 1 AC1 19 PRO A 559 GLN A 839 LYS A 842 LEU A 866 SITE 2 AC1 19 VAL A 895 ALA A 896 LYS A 898 HIS A 901 SITE 3 AC1 19 ARG A 904 HIS A 920 THR A 921 THR A 922 SITE 4 AC1 19 ASP A 925 HOH A1320 HOH A1344 HOH A1359 SITE 5 AC1 19 HOH A1424 HOH A1427 HOH A1518 CRYST1 101.170 101.170 131.730 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009884 0.005707 0.000000 0.00000 SCALE2 0.000000 0.011413 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007591 0.00000