HEADER TRANSFERASE/TRANSFERASE INHIBITOR 20-MAR-13 4JQ8 TITLE CRYSTAL STRUCTURE OF EGFR KINASE DOMAIN IN COMPLEX WITH COMPOUND 4B COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TYROSINE KINASE DOMAIN, UNP RESIDUES 696-1021; COMPND 5 SYNONYM: PROTO-ONCOGENE C-ERBB-1, RECEPTOR TYROSINE-PROTEIN KINASE COMPND 6 ERBB-1; COMPND 7 EC: 2.7.10.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFR; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HI5; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PBACPAK-MT-EGFP KEYWDS TRANSFERASE, TYROSINE KINASE DOMAIN, ATP-BINDING DOMAIN, KEYWDS 2 AUTOPHOSPHORYLATION, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.H.PENG,J.S.WU REVDAT 2 08-NOV-23 4JQ8 1 REMARK SEQADV REVDAT 1 19-JUN-13 4JQ8 0 JRNL AUTH Y.H.PENG,H.Y.SHIAO,C.H.TU,P.M.LIU,J.T.HSU,P.K.AMANCHA, JRNL AUTH 2 J.S.WU,M.S.COUMAR,C.H.CHEN,S.Y.WANG,W.H.LIN,H.Y.SUN, JRNL AUTH 3 Y.S.CHAO,P.C.LYU,H.P.HSIEH,S.Y.WU JRNL TITL PROTEIN KINASE INHIBITOR DESIGN BY TARGETING THE ASP-PHE-GLY JRNL TITL 2 (DFG) MOTIF: THE ROLE OF THE DFG MOTIF IN THE DESIGN OF JRNL TITL 3 EPIDERMAL GROWTH FACTOR RECEPTOR INHIBITORS JRNL REF J.MED.CHEM. V. 56 3889 2013 JRNL REFN ISSN 0022-2623 JRNL PMID 23611691 JRNL DOI 10.1021/JM400072P REMARK 2 REMARK 2 RESOLUTION. 2.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 11766 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 608 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.83 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 814 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.3030 REMARK 3 BIN FREE R VALUE SET COUNT : 52 REMARK 3 BIN FREE R VALUE : 0.3480 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2409 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 39 REMARK 3 SOLVENT ATOMS : 21 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.610 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.309 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.228 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.419 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2504 ; 0.010 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1720 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3391 ; 1.265 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4205 ; 1.061 ; 3.005 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 301 ; 5.828 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 105 ;37.610 ;24.286 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 449 ;16.424 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;11.081 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 374 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2718 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 491 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 672 A 995 REMARK 3 ORIGIN FOR THE GROUP (A): 156.6700 122.7300 205.7720 REMARK 3 T TENSOR REMARK 3 T11: 0.1159 T22: 0.0821 REMARK 3 T33: 0.0419 T12: -0.0543 REMARK 3 T13: -0.0023 T23: -0.0459 REMARK 3 L TENSOR REMARK 3 L11: 2.2114 L22: 2.2743 REMARK 3 L33: 0.9948 L12: 0.5799 REMARK 3 L13: 0.0763 L23: 0.6199 REMARK 3 S TENSOR REMARK 3 S11: -0.1702 S12: 0.4088 S13: -0.2604 REMARK 3 S21: -0.4243 S22: 0.2188 S23: -0.0526 REMARK 3 S31: -0.0537 S32: 0.0572 S33: -0.0487 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 1.10 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4JQ8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1000078366. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL12B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12717 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.830 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 16.00 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.48400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.140 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 9.2 REMARK 200 STARTING MODEL: PDB ENTRY 1M17 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M AMMONIUM CITRATE TRIBASE, 0.1M REMARK 280 BIS-TRIS PROPANE, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 73.37250 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 73.37250 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 73.37250 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 73.37250 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 73.37250 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 73.37250 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 73.37250 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 73.37250 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 73.37250 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 73.37250 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 73.37250 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 73.37250 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 73.37250 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 73.37250 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 73.37250 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 73.37250 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 73.37250 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 73.37250 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 73.37250 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 73.37250 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 73.37250 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 73.37250 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 73.37250 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 73.37250 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 73.37250 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 73.37250 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 73.37250 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 73.37250 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 73.37250 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 73.37250 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 73.37250 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 73.37250 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 73.37250 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 73.37250 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 73.37250 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 73.37250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 293.49000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 293.49000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 670 REMARK 465 PRO A 671 REMARK 465 GLU A 961 REMARK 465 ARG A 962 REMARK 465 MET A 963 REMARK 465 HIS A 964 REMARK 465 LEU A 965 REMARK 465 PRO A 966 REMARK 465 SER A 967 REMARK 465 PRO A 968 REMARK 465 THR A 969 REMARK 465 ASP A 970 REMARK 465 SER A 971 REMARK 465 ASN A 972 REMARK 465 PHE A 973 REMARK 465 TYR A 974 REMARK 465 ARG A 975 REMARK 465 ALA A 976 REMARK 465 LEU A 977 REMARK 465 MET A 978 REMARK 465 ASP A 979 REMARK 465 GLU A 980 REMARK 465 GLU A 981 REMARK 465 GLN A 996 REMARK 465 GLN A 997 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 730 CG CD CE NZ REMARK 470 ILE A 994 CB CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 713 57.80 -116.59 REMARK 500 GLU A 780 33.00 -95.82 REMARK 500 HIS A 781 17.55 -150.70 REMARK 500 ASP A 813 46.40 -149.76 REMARK 500 PHE A 832 39.65 -90.87 REMARK 500 GLU A 841 36.03 -98.96 REMARK 500 GLU A 848 -56.26 -143.00 REMARK 500 LYS A 851 63.70 73.35 REMARK 500 ASP A 990 31.58 -86.45 REMARK 500 ILE A 994 109.90 -48.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE KJ8 A 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4JQ7 RELATED DB: PDB REMARK 900 RELATED ID: 4JR3 RELATED DB: PDB REMARK 900 RELATED ID: 4JRV RELATED DB: PDB DBREF 4JQ8 A 672 997 UNP P00533 EGFR_HUMAN 696 1021 SEQADV 4JQ8 GLY A 670 UNP P00533 EXPRESSION TAG SEQADV 4JQ8 PRO A 671 UNP P00533 EXPRESSION TAG SEQRES 1 A 328 GLY PRO GLY GLU ALA PRO ASN GLN ALA LEU LEU ARG ILE SEQRES 2 A 328 LEU LYS GLU THR GLU PHE LYS LYS ILE LYS VAL LEU GLY SEQRES 3 A 328 SER GLY ALA PHE GLY THR VAL TYR LYS GLY LEU TRP ILE SEQRES 4 A 328 PRO GLU GLY GLU LYS VAL LYS ILE PRO VAL ALA ILE LYS SEQRES 5 A 328 GLU LEU ARG GLU ALA THR SER PRO LYS ALA ASN LYS GLU SEQRES 6 A 328 ILE LEU ASP GLU ALA TYR VAL MET ALA SER VAL ASP ASN SEQRES 7 A 328 PRO HIS VAL CYS ARG LEU LEU GLY ILE CYS LEU THR SER SEQRES 8 A 328 THR VAL GLN LEU ILE THR GLN LEU MET PRO PHE GLY CYS SEQRES 9 A 328 LEU LEU ASP TYR VAL ARG GLU HIS LYS ASP ASN ILE GLY SEQRES 10 A 328 SER GLN TYR LEU LEU ASN TRP CYS VAL GLN ILE ALA LYS SEQRES 11 A 328 GLY MET ASN TYR LEU GLU ASP ARG ARG LEU VAL HIS ARG SEQRES 12 A 328 ASP LEU ALA ALA ARG ASN VAL LEU VAL LYS THR PRO GLN SEQRES 13 A 328 HIS VAL LYS ILE THR ASP PHE GLY LEU ALA LYS LEU LEU SEQRES 14 A 328 GLY ALA GLU GLU LYS GLU TYR HIS ALA GLU GLY GLY LYS SEQRES 15 A 328 VAL PRO ILE LYS TRP MET ALA LEU GLU SER ILE LEU HIS SEQRES 16 A 328 ARG ILE TYR THR HIS GLN SER ASP VAL TRP SER TYR GLY SEQRES 17 A 328 VAL THR VAL TRP GLU LEU MET THR PHE GLY SER LYS PRO SEQRES 18 A 328 TYR ASP GLY ILE PRO ALA SER GLU ILE SER SER ILE LEU SEQRES 19 A 328 GLU LYS GLY GLU ARG LEU PRO GLN PRO PRO ILE CYS THR SEQRES 20 A 328 ILE ASP VAL TYR MET ILE MET VAL LYS CYS TRP MET ILE SEQRES 21 A 328 ASP ALA ASP SER ARG PRO LYS PHE ARG GLU LEU ILE ILE SEQRES 22 A 328 GLU PHE SER LYS MET ALA ARG ASP PRO GLN ARG TYR LEU SEQRES 23 A 328 VAL ILE GLN GLY ASP GLU ARG MET HIS LEU PRO SER PRO SEQRES 24 A 328 THR ASP SER ASN PHE TYR ARG ALA LEU MET ASP GLU GLU SEQRES 25 A 328 ASP MET ASP ASP VAL VAL ASP ALA ASP GLU TYR LEU ILE SEQRES 26 A 328 PRO GLN GLN HET KJ8 A1001 39 HETNAM KJ8 N-[3-(4-{[(1S)-2-HYDROXY-1-PHENYLETHYL]AMINO}-6- HETNAM 2 KJ8 PHENYLFURO[2,3-D]PYRIMIDIN-5-YL)PHENYL]-N~3~,N~3~- HETNAM 3 KJ8 DIMETHYL-BETA-ALANINAMIDE FORMUL 2 KJ8 C31 H31 N5 O3 FORMUL 3 HOH *21(H2 O) HELIX 1 1 LYS A 684 THR A 686 5 3 HELIX 2 2 SER A 728 SER A 744 1 17 HELIX 3 3 CYS A 773 GLU A 780 1 8 HELIX 4 4 HIS A 781 ILE A 785 5 5 HELIX 5 5 GLY A 786 ARG A 807 1 22 HELIX 6 6 ALA A 815 ARG A 817 5 3 HELIX 7 7 PRO A 853 MET A 857 5 5 HELIX 8 8 ALA A 858 ARG A 865 1 8 HELIX 9 9 THR A 868 THR A 885 1 18 HELIX 10 10 PRO A 895 GLY A 906 1 12 HELIX 11 11 THR A 916 TRP A 927 1 12 HELIX 12 12 ASP A 930 ARG A 934 5 5 HELIX 13 13 LYS A 936 ARG A 949 1 14 HELIX 14 14 ASP A 950 TYR A 954 5 5 SHEET 1 A 6 ILE A 682 LEU A 683 0 SHEET 2 A 6 LEU A 753 LEU A 758 1 O ILE A 756 N LEU A 683 SHEET 3 A 6 VAL A 762 GLN A 767 -1 O ILE A 765 N LEU A 754 SHEET 4 A 6 ILE A 716 GLU A 722 -1 N LYS A 721 O LEU A 764 SHEET 5 A 6 THR A 701 TRP A 707 -1 N TRP A 707 O ILE A 716 SHEET 6 A 6 PHE A 688 GLY A 695 -1 N ILE A 691 O LYS A 704 SHEET 1 B 2 LEU A 809 VAL A 810 0 SHEET 2 B 2 LYS A 836 LEU A 837 -1 O LYS A 836 N VAL A 810 SHEET 1 C 2 VAL A 819 THR A 823 0 SHEET 2 C 2 HIS A 826 ILE A 829 -1 O LYS A 828 N LEU A 820 SHEET 1 D 2 TYR A 845 HIS A 846 0 SHEET 2 D 2 ILE A 866 TYR A 867 -1 O TYR A 867 N TYR A 845 SITE 1 AC1 12 PHE A 699 VAL A 702 ALA A 719 LYS A 721 SITE 2 AC1 12 THR A 766 GLN A 767 MET A 769 PRO A 770 SITE 3 AC1 12 ARG A 817 ASN A 818 LEU A 820 ASP A 831 CRYST1 146.745 146.745 146.745 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006815 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006815 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006815 0.00000