HEADER TRANSFERASE/TRANSFERASE INHIBITOR 01-AUG-12 4GEB TITLE KYNURENINE AMINOTRANSFERASE II INHIBITORS COMPND MOL_ID: 1; COMPND 2 MOLECULE: KYNURENINE/ALPHA-AMINOADIPATE AMINOTRANSFERASE, COMPND 3 MITOCHONDRIAL; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: KAT/AADAT, 2-AMINOADIPATE AMINOTRANSFERASE, 2-AMINOADIPATE COMPND 6 TRANSAMINASE, ALPHA-AMINOADIPATE AMINOTRANSFERASE, AADAT, KYNURENINE COMPND 7 AMINOTRANSFERASE II, KYNURENINE--OXOGLUTARATE AMINOTRANSFERASE II, COMPND 8 KYNURENINE--OXOGLUTARATE TRANSAMINASE 2, KYNURENINE--OXOGLUTARATE COMPND 9 TRANSAMINASE II; COMPND 10 EC: 2.6.1.39, 2.6.1.7; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AADAT, KAT2; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS AMINOTRANSFERASE, IRREVERSIBLE INHIBITOR, TRANSFERASE-TRANSFERASE KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.PANDIT REVDAT 3 13-SEP-23 4GEB 1 REMARK SEQADV REVDAT 2 22-MAY-13 4GEB 1 JRNL REVDAT 1 20-MAR-13 4GEB 0 JRNL AUTH A.B.DOUNAY,M.ANDERSON,B.M.BECHLE,E.EVRARD,X.GAN,J.Y.KIM, JRNL AUTH 2 L.A.MCALLISTER,J.PANDIT,S.RONG,M.A.SALAFIA,J.B.TUTTLE, JRNL AUTH 3 L.E.ZAWADZKE,P.R.VERHOEST JRNL TITL PF-04859989 AS A TEMPLATE FOR STRUCTURE-BASED DRUG DESIGN: JRNL TITL 2 IDENTIFICATION OF NEW PYRAZOLE SERIES OF IRREVERSIBLE KAT II JRNL TITL 3 INHIBITORS WITH IMPROVED LIPOPHILIC EFFICIENCY. JRNL REF BIOORG.MED.CHEM.LETT. V. 23 1961 2013 JRNL REFN ISSN 0960-894X JRNL PMID 23466229 JRNL DOI 10.1016/J.BMCL.2013.02.039 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT BUSTER 2.9.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.34 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 62237 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 3152 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.21 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.71 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3925 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2089 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3715 REMARK 3 BIN R VALUE (WORKING SET) : 0.2069 REMARK 3 BIN FREE R VALUE : 0.2478 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.35 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 210 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6688 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 86 REMARK 3 SOLVENT ATOMS : 805 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.07670 REMARK 3 B22 (A**2) : 1.60070 REMARK 3 B33 (A**2) : 0.47600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.219 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.173 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6940 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 9436 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2352 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 164 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1002 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6940 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 902 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 8436 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.14 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.40 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.36 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|1 - A|428 A|999 - A|999 } REMARK 3 ORIGIN FOR THE GROUP (A): 2.5778 14.0130 -49.8078 REMARK 3 T TENSOR REMARK 3 T11: -0.1295 T22: -0.0838 REMARK 3 T33: -0.0650 T12: 0.0047 REMARK 3 T13: 0.0013 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 0.7317 L22: 0.7215 REMARK 3 L33: 0.7000 L12: 0.0103 REMARK 3 L13: 0.1571 L23: -0.1776 REMARK 3 S TENSOR REMARK 3 S11: 0.0237 S12: 0.0649 S13: -0.0555 REMARK 3 S21: -0.0448 S22: -0.0165 S23: -0.1086 REMARK 3 S31: 0.0486 S32: 0.0670 S33: -0.0072 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|1 - B|428 B|999 - B|999 } REMARK 3 ORIGIN FOR THE GROUP (A): -10.2507 -7.3397 -33.6429 REMARK 3 T TENSOR REMARK 3 T11: -0.0681 T22: -0.0561 REMARK 3 T33: -0.0744 T12: 0.0000 REMARK 3 T13: -0.0078 T23: 0.0122 REMARK 3 L TENSOR REMARK 3 L11: 0.3778 L22: 0.5828 REMARK 3 L33: 0.5581 L12: 0.0616 REMARK 3 L13: -0.1713 L23: -0.2251 REMARK 3 S TENSOR REMARK 3 S11: 0.0017 S12: -0.0083 S13: -0.0596 REMARK 3 S21: 0.0014 S22: 0.0036 S23: -0.0096 REMARK 3 S31: 0.1008 S32: -0.0409 S33: -0.0053 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4GEB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000074075. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.16 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62519 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.147 REMARK 200 RESOLUTION RANGE LOW (A) : 116.523 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.12300 REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.49800 REMARK 200 R SYM FOR SHELL (I) : 0.49800 REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3UE8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.80800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.26150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.34100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.26150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.80800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.34100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -126.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 429 REMARK 465 GLY A 430 REMARK 465 SER A 431 REMARK 465 LEU A 432 REMARK 465 GLU A 433 REMARK 465 HIS A 434 REMARK 465 HIS A 435 REMARK 465 HIS A 436 REMARK 465 HIS A 437 REMARK 465 HIS A 438 REMARK 465 HIS A 439 REMARK 465 ARG B 429 REMARK 465 GLY B 430 REMARK 465 SER B 431 REMARK 465 LEU B 432 REMARK 465 GLU B 433 REMARK 465 HIS B 434 REMARK 465 HIS B 435 REMARK 465 HIS B 436 REMARK 465 HIS B 437 REMARK 465 HIS B 438 REMARK 465 HIS B 439 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 638 O HOH B 658 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 56 102.98 -56.38 REMARK 500 ASN A 96 60.54 36.84 REMARK 500 ASP A 162 -157.64 -142.41 REMARK 500 ASN A 189 59.16 -113.49 REMARK 500 ASP A 231 61.14 -118.92 REMARK 500 SER A 266 131.05 -179.65 REMARK 500 SER A 291 -88.32 -118.96 REMARK 500 LEU A 293 -54.42 76.58 REMARK 500 SER A 296 122.22 -39.73 REMARK 500 LYS A 361 -79.63 -53.80 REMARK 500 GLU A 372 -65.46 -126.79 REMARK 500 LEU A 426 47.09 -90.81 REMARK 500 ASN B 96 61.04 36.17 REMARK 500 ASN B 189 57.80 -111.19 REMARK 500 ASP B 231 61.43 -119.93 REMARK 500 SER B 266 130.79 -178.47 REMARK 500 SER B 291 -89.16 -118.46 REMARK 500 LEU B 293 -54.08 76.32 REMARK 500 SER B 296 122.73 -38.97 REMARK 500 GLU B 372 -63.45 -128.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0LD A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0LD B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 504 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4GDY RELATED DB: PDB REMARK 900 RELATED ID: 4GE4 RELATED DB: PDB REMARK 900 RELATED ID: 4GE7 RELATED DB: PDB REMARK 900 RELATED ID: 4GE9 RELATED DB: PDB DBREF 4GEB A 1 425 UNP Q8N5Z0 AADAT_HUMAN 1 425 DBREF 4GEB B 1 425 UNP Q8N5Z0 AADAT_HUMAN 1 425 SEQADV 4GEB SER A 240 UNP Q8N5Z0 LYS 240 ENGINEERED MUTATION SEQADV 4GEB GLY A 241 UNP Q8N5Z0 PHE 241 ENGINEERED MUTATION SEQADV 4GEB LEU A 426 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB VAL A 427 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB PRO A 428 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB ARG A 429 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB GLY A 430 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB SER A 431 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB LEU A 432 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB GLU A 433 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB HIS A 434 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB HIS A 435 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB HIS A 436 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB HIS A 437 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB HIS A 438 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB HIS A 439 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB SER B 240 UNP Q8N5Z0 LYS 240 ENGINEERED MUTATION SEQADV 4GEB GLY B 241 UNP Q8N5Z0 PHE 241 ENGINEERED MUTATION SEQADV 4GEB LEU B 426 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB VAL B 427 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB PRO B 428 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB ARG B 429 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB GLY B 430 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB SER B 431 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB LEU B 432 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB GLU B 433 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB HIS B 434 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB HIS B 435 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB HIS B 436 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB HIS B 437 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB HIS B 438 UNP Q8N5Z0 EXPRESSION TAG SEQADV 4GEB HIS B 439 UNP Q8N5Z0 EXPRESSION TAG SEQRES 1 A 439 MET ASN TYR ALA ARG PHE ILE THR ALA ALA SER ALA ALA SEQRES 2 A 439 ARG ASN PRO SER PRO ILE ARG THR MET THR ASP ILE LEU SEQRES 3 A 439 SER ARG GLY PRO LYS SER MET ILE SER LEU ALA GLY GLY SEQRES 4 A 439 LEU PRO ASN PRO ASN MET PHE PRO PHE LYS THR ALA VAL SEQRES 5 A 439 ILE THR VAL GLU ASN GLY LYS THR ILE GLN PHE GLY GLU SEQRES 6 A 439 GLU MET MET LYS ARG ALA LEU GLN TYR SER PRO SER ALA SEQRES 7 A 439 GLY ILE PRO GLU LEU LEU SER TRP LEU LYS GLN LEU GLN SEQRES 8 A 439 ILE LYS LEU HIS ASN PRO PRO THR ILE HIS TYR PRO PRO SEQRES 9 A 439 SER GLN GLY GLN MET ASP LEU CYS VAL THR SER GLY SER SEQRES 10 A 439 GLN GLN GLY LEU CYS LYS VAL PHE GLU MET ILE ILE ASN SEQRES 11 A 439 PRO GLY ASP ASN VAL LEU LEU ASP GLU PRO ALA TYR SER SEQRES 12 A 439 GLY THR LEU GLN SER LEU HIS PRO LEU GLY CYS ASN ILE SEQRES 13 A 439 ILE ASN VAL ALA SER ASP GLU SER GLY ILE VAL PRO ASP SEQRES 14 A 439 SER LEU ARG ASP ILE LEU SER ARG TRP LYS PRO GLU ASP SEQRES 15 A 439 ALA LYS ASN PRO GLN LYS ASN THR PRO LYS PHE LEU TYR SEQRES 16 A 439 THR VAL PRO ASN GLY ASN ASN PRO THR GLY ASN SER LEU SEQRES 17 A 439 THR SER GLU ARG LYS LYS GLU ILE TYR GLU LEU ALA ARG SEQRES 18 A 439 LYS TYR ASP PHE LEU ILE ILE GLU ASP ASP PRO TYR TYR SEQRES 19 A 439 PHE LEU GLN PHE ASN SER GLY ARG VAL PRO THR PHE LEU SEQRES 20 A 439 SER MET ASP VAL ASP GLY ARG VAL ILE ARG ALA ASP SER SEQRES 21 A 439 PHE SER LYS ILE ILE SER SER GLY LEU ARG ILE GLY PHE SEQRES 22 A 439 LEU THR GLY PRO LYS PRO LEU ILE GLU ARG VAL ILE LEU SEQRES 23 A 439 HIS ILE GLN VAL SER THR LEU HIS PRO SER THR PHE ASN SEQRES 24 A 439 GLN LEU MET ILE SER GLN LEU LEU HIS GLU TRP GLY GLU SEQRES 25 A 439 GLU GLY PHE MET ALA HIS VAL ASP ARG VAL ILE ASP PHE SEQRES 26 A 439 TYR SER ASN GLN LYS ASP ALA ILE LEU ALA ALA ALA ASP SEQRES 27 A 439 LYS TRP LEU THR GLY LEU ALA GLU TRP HIS VAL PRO ALA SEQRES 28 A 439 ALA GLY MET PHE LEU TRP ILE LYS VAL LYS GLY ILE ASN SEQRES 29 A 439 ASP VAL LYS GLU LEU ILE GLU GLU LYS ALA VAL LYS MET SEQRES 30 A 439 GLY VAL LEU MET LEU PRO GLY ASN ALA PHE TYR VAL ASP SEQRES 31 A 439 SER SER ALA PRO SER PRO TYR LEU ARG ALA SER PHE SER SEQRES 32 A 439 SER ALA SER PRO GLU GLN MET ASP VAL ALA PHE GLN VAL SEQRES 33 A 439 LEU ALA GLN LEU ILE LYS GLU SER LEU LEU VAL PRO ARG SEQRES 34 A 439 GLY SER LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 439 MET ASN TYR ALA ARG PHE ILE THR ALA ALA SER ALA ALA SEQRES 2 B 439 ARG ASN PRO SER PRO ILE ARG THR MET THR ASP ILE LEU SEQRES 3 B 439 SER ARG GLY PRO LYS SER MET ILE SER LEU ALA GLY GLY SEQRES 4 B 439 LEU PRO ASN PRO ASN MET PHE PRO PHE LYS THR ALA VAL SEQRES 5 B 439 ILE THR VAL GLU ASN GLY LYS THR ILE GLN PHE GLY GLU SEQRES 6 B 439 GLU MET MET LYS ARG ALA LEU GLN TYR SER PRO SER ALA SEQRES 7 B 439 GLY ILE PRO GLU LEU LEU SER TRP LEU LYS GLN LEU GLN SEQRES 8 B 439 ILE LYS LEU HIS ASN PRO PRO THR ILE HIS TYR PRO PRO SEQRES 9 B 439 SER GLN GLY GLN MET ASP LEU CYS VAL THR SER GLY SER SEQRES 10 B 439 GLN GLN GLY LEU CYS LYS VAL PHE GLU MET ILE ILE ASN SEQRES 11 B 439 PRO GLY ASP ASN VAL LEU LEU ASP GLU PRO ALA TYR SER SEQRES 12 B 439 GLY THR LEU GLN SER LEU HIS PRO LEU GLY CYS ASN ILE SEQRES 13 B 439 ILE ASN VAL ALA SER ASP GLU SER GLY ILE VAL PRO ASP SEQRES 14 B 439 SER LEU ARG ASP ILE LEU SER ARG TRP LYS PRO GLU ASP SEQRES 15 B 439 ALA LYS ASN PRO GLN LYS ASN THR PRO LYS PHE LEU TYR SEQRES 16 B 439 THR VAL PRO ASN GLY ASN ASN PRO THR GLY ASN SER LEU SEQRES 17 B 439 THR SER GLU ARG LYS LYS GLU ILE TYR GLU LEU ALA ARG SEQRES 18 B 439 LYS TYR ASP PHE LEU ILE ILE GLU ASP ASP PRO TYR TYR SEQRES 19 B 439 PHE LEU GLN PHE ASN SER GLY ARG VAL PRO THR PHE LEU SEQRES 20 B 439 SER MET ASP VAL ASP GLY ARG VAL ILE ARG ALA ASP SER SEQRES 21 B 439 PHE SER LYS ILE ILE SER SER GLY LEU ARG ILE GLY PHE SEQRES 22 B 439 LEU THR GLY PRO LYS PRO LEU ILE GLU ARG VAL ILE LEU SEQRES 23 B 439 HIS ILE GLN VAL SER THR LEU HIS PRO SER THR PHE ASN SEQRES 24 B 439 GLN LEU MET ILE SER GLN LEU LEU HIS GLU TRP GLY GLU SEQRES 25 B 439 GLU GLY PHE MET ALA HIS VAL ASP ARG VAL ILE ASP PHE SEQRES 26 B 439 TYR SER ASN GLN LYS ASP ALA ILE LEU ALA ALA ALA ASP SEQRES 27 B 439 LYS TRP LEU THR GLY LEU ALA GLU TRP HIS VAL PRO ALA SEQRES 28 B 439 ALA GLY MET PHE LEU TRP ILE LYS VAL LYS GLY ILE ASN SEQRES 29 B 439 ASP VAL LYS GLU LEU ILE GLU GLU LYS ALA VAL LYS MET SEQRES 30 B 439 GLY VAL LEU MET LEU PRO GLY ASN ALA PHE TYR VAL ASP SEQRES 31 B 439 SER SER ALA PRO SER PRO TYR LEU ARG ALA SER PHE SER SEQRES 32 B 439 SER ALA SER PRO GLU GLN MET ASP VAL ALA PHE GLN VAL SEQRES 33 B 439 LEU ALA GLN LEU ILE LYS GLU SER LEU LEU VAL PRO ARG SEQRES 34 B 439 GLY SER LEU GLU HIS HIS HIS HIS HIS HIS HET 0LD A 501 33 HET SO4 A 502 5 HET 0LD B 501 33 HET SO4 B 502 5 HET SO4 B 503 5 HET SO4 B 504 5 HETNAM 0LD (5-HYDROXY-4-{[(7-HYDROXY-6-OXO-2-PHENYL-6,7-DIHYDRO- HETNAM 2 0LD 2H-PYRAZOLO[3,4-B]PYRIDIN-5-YL)AMINO]METHYL}-6- HETNAM 3 0LD METHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE HETNAM SO4 SULFATE ION FORMUL 3 0LD 2(C20 H20 N5 O7 P) FORMUL 4 SO4 4(O4 S 2-) FORMUL 9 HOH *805(H2 O) HELIX 1 1 ASN A 2 ILE A 7 5 6 HELIX 2 2 THR A 8 ARG A 14 1 7 HELIX 3 3 SER A 17 SER A 27 1 11 HELIX 4 4 ASN A 42 PHE A 46 5 5 HELIX 5 5 GLY A 64 LEU A 72 1 9 HELIX 6 6 ILE A 80 ASN A 96 1 17 HELIX 7 7 PRO A 103 GLY A 107 5 5 HELIX 8 8 GLY A 116 ILE A 129 1 14 HELIX 9 9 TYR A 142 HIS A 150 1 9 HELIX 10 10 PRO A 151 GLY A 153 5 3 HELIX 11 11 VAL A 167 SER A 176 1 10 HELIX 12 12 ARG A 177 TRP A 178 5 2 HELIX 13 13 LYS A 179 ASN A 185 5 7 HELIX 14 14 THR A 209 TYR A 223 1 15 HELIX 15 15 TYR A 233 GLN A 237 5 5 HELIX 16 16 PHE A 246 ASP A 250 5 5 HELIX 17 17 LYS A 278 VAL A 290 1 13 HELIX 18 18 SER A 296 THR A 342 1 47 HELIX 19 19 VAL A 366 GLU A 372 1 7 HELIX 20 20 GLU A 372 MET A 377 1 6 HELIX 21 21 ASN A 385 TYR A 388 5 4 HELIX 22 22 SER A 406 LEU A 426 1 21 HELIX 23 23 ASN B 2 PHE B 6 5 5 HELIX 24 24 THR B 8 ARG B 14 1 7 HELIX 25 25 SER B 17 SER B 27 1 11 HELIX 26 26 ASN B 42 PHE B 46 5 5 HELIX 27 27 GLY B 64 LEU B 72 1 9 HELIX 28 28 ILE B 80 ASN B 96 1 17 HELIX 29 29 PRO B 103 GLY B 107 5 5 HELIX 30 30 GLY B 116 ILE B 129 1 14 HELIX 31 31 TYR B 142 HIS B 150 1 9 HELIX 32 32 PRO B 151 GLY B 153 5 3 HELIX 33 33 VAL B 167 SER B 176 1 10 HELIX 34 34 ARG B 177 TRP B 178 5 2 HELIX 35 35 LYS B 179 ASN B 185 5 7 HELIX 36 36 THR B 209 TYR B 223 1 15 HELIX 37 37 TYR B 233 GLN B 237 5 5 HELIX 38 38 PHE B 246 ASP B 250 5 5 HELIX 39 39 LYS B 278 VAL B 290 1 13 HELIX 40 40 SER B 296 THR B 342 1 47 HELIX 41 41 VAL B 366 GLU B 372 1 7 HELIX 42 42 GLU B 372 MET B 377 1 6 HELIX 43 43 ASN B 385 TYR B 388 5 4 HELIX 44 44 SER B 406 VAL B 427 1 22 SHEET 1 A 2 ILE A 34 SER A 35 0 SHEET 2 A 2 VAL B 379 LEU B 380 1 O LEU B 380 N ILE A 34 SHEET 1 B 4 LYS A 59 PHE A 63 0 SHEET 2 B 4 PHE A 48 VAL A 55 -1 N ILE A 53 O ILE A 61 SHEET 3 B 4 PHE B 48 VAL B 55 -1 O THR B 54 N LYS A 49 SHEET 4 B 4 LYS B 59 PHE B 63 -1 O ILE B 61 N ILE B 53 SHEET 1 C 7 MET A 109 THR A 114 0 SHEET 2 C 7 GLY A 272 PRO A 277 -1 O LEU A 274 N CYS A 112 SHEET 3 C 7 VAL A 255 SER A 260 -1 N ARG A 257 O THR A 275 SHEET 4 C 7 LEU A 226 ASP A 230 1 N GLU A 229 O ALA A 258 SHEET 5 C 7 PHE A 193 THR A 196 1 N LEU A 194 O ILE A 228 SHEET 6 C 7 ASN A 134 LEU A 137 1 N LEU A 136 O TYR A 195 SHEET 7 C 7 ASN A 155 ASN A 158 1 O ILE A 157 N VAL A 135 SHEET 1 D 2 SER A 161 ASP A 162 0 SHEET 2 D 2 GLY A 165 ILE A 166 -1 O GLY A 165 N ASP A 162 SHEET 1 E 4 ALA A 345 TRP A 347 0 SHEET 2 E 4 PHE A 355 VAL A 360 -1 O LYS A 359 N GLU A 346 SHEET 3 E 4 TYR A 397 SER A 401 -1 O LEU A 398 N ILE A 358 SHEET 4 E 4 LEU A 382 PRO A 383 -1 N LEU A 382 O ARG A 399 SHEET 1 F 2 VAL A 379 LEU A 380 0 SHEET 2 F 2 ILE B 34 SER B 35 1 O ILE B 34 N LEU A 380 SHEET 1 G 7 MET B 109 THR B 114 0 SHEET 2 G 7 GLY B 272 PRO B 277 -1 O GLY B 272 N THR B 114 SHEET 3 G 7 VAL B 255 SER B 260 -1 N ARG B 257 O THR B 275 SHEET 4 G 7 LEU B 226 ASP B 230 1 N GLU B 229 O ILE B 256 SHEET 5 G 7 PHE B 193 THR B 196 1 N LEU B 194 O ILE B 228 SHEET 6 G 7 ASN B 134 LEU B 137 1 N LEU B 136 O TYR B 195 SHEET 7 G 7 ASN B 155 ASN B 158 1 O ILE B 157 N VAL B 135 SHEET 1 H 2 SER B 161 ASP B 162 0 SHEET 2 H 2 GLY B 165 ILE B 166 -1 O GLY B 165 N ASP B 162 SHEET 1 I 4 ALA B 345 TRP B 347 0 SHEET 2 I 4 PHE B 355 VAL B 360 -1 O LYS B 359 N GLU B 346 SHEET 3 I 4 TYR B 397 SER B 401 -1 O LEU B 398 N ILE B 358 SHEET 4 I 4 LEU B 382 PRO B 383 -1 N LEU B 382 O ARG B 399 CISPEP 1 GLU A 56 ASN A 57 0 -8.04 CISPEP 2 GLU A 139 PRO A 140 0 -2.31 CISPEP 3 ASN A 202 PRO A 203 0 18.91 CISPEP 4 GLU B 56 ASN B 57 0 -12.54 CISPEP 5 GLU B 139 PRO B 140 0 -2.65 CISPEP 6 ASN B 202 PRO B 203 0 18.22 SITE 1 AC1 20 GLY A 116 SER A 117 GLN A 118 TYR A 142 SITE 2 AC1 20 ASN A 202 ASP A 230 PRO A 232 TYR A 233 SITE 3 AC1 20 SER A 260 SER A 262 LYS A 263 ARG A 270 SITE 4 AC1 20 ARG A 399 HOH A 807 HOH A 856 ILE B 19 SITE 5 AC1 20 GLY B 39 LEU B 40 TYR B 74 SER B 75 SITE 1 AC2 6 ARG A 177 TRP A 178 LYS A 188 ASN A 189 SITE 2 AC2 6 HOH A 703 HOH A 714 SITE 1 AC3 19 GLY A 39 LEU A 40 TYR A 74 SER A 75 SITE 2 AC3 19 GLY B 116 SER B 117 GLN B 118 TYR B 142 SITE 3 AC3 19 ASN B 202 ASP B 230 PRO B 232 TYR B 233 SITE 4 AC3 19 SER B 260 SER B 262 LYS B 263 ARG B 270 SITE 5 AC3 19 ARG B 399 HOH B 792 HOH B 802 SITE 1 AC4 10 GLN A 119 LYS A 123 SER A 291 THR A 292 SITE 2 AC4 10 GLN B 119 LYS B 123 SER B 291 THR B 292 SITE 3 AC4 10 HOH B 789 HOH B1010 SITE 1 AC5 5 ARG B 177 TRP B 178 LYS B 188 ASN B 189 SITE 2 AC5 5 HOH B 753 SITE 1 AC6 3 HIS A 101 HOH A 742 ARG B 242 CRYST1 85.616 114.682 116.523 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011680 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008720 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008582 0.00000