HEADER LIGASE 28-JUN-12 4FU0 TITLE CRYSTAL STRUCTURE OF VANG D-ALA:D-SER LIGASE FROM ENTEROCOCCUS TITLE 2 FAECALIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: D-ALANINE--D-ALANINE LIGASE 7; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: D-ALA-D-ALA LIGASE 7, D-ALANYLALANINE SYNTHETASE 7; COMPND 5 EC: 6.3.2.4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; SOURCE 3 ORGANISM_TAXID: 1351; SOURCE 4 STRAIN: BM4518; SOURCE 5 GENE: DDL7, VANG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PAT911 [PET28A(+) VANG] KEYWDS VANCOMYCIN RESISTANCE, PEPTIDOGLYCAN SYNTHESIS, D-ALA:D-SER LIGASE, KEYWDS 2 ATP-GRASP DOMAIN, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR D.MEZIANE-CHERIF,F.A.SAUL,A.HAOUZ,P.COURVALIN REVDAT 3 08-NOV-23 4FU0 1 REMARK SEQADV REVDAT 2 13-MAR-13 4FU0 1 JRNL REVDAT 1 19-SEP-12 4FU0 0 JRNL AUTH D.MEZIANE-CHERIF,F.A.SAUL,A.HAOUZ,P.COURVALIN JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF VANG JRNL TITL 2 D-ALA:D-SER LIGASE ASSOCIATED WITH VANCOMYCIN RESISTANCE IN JRNL TITL 3 ENTEROCOCCUS FAECALIS JRNL REF J.BIOL.CHEM. V. 287 37583 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 22969085 JRNL DOI 10.1074/JBC.M112.405522 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 55248 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1747 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 40 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.38 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2050 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.14 REMARK 3 BIN R VALUE (WORKING SET) : 0.3280 REMARK 3 BIN FREE R VALUE SET COUNT : 60 REMARK 3 BIN FREE R VALUE : 0.4040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5342 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 99 REMARK 3 SOLVENT ATOMS : 300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.99000 REMARK 3 B22 (A**2) : 1.99000 REMARK 3 B33 (A**2) : -2.99000 REMARK 3 B12 (A**2) : 1.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.191 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.173 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.131 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.673 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5543 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3699 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7507 ; 1.402 ; 1.983 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9064 ; 0.854 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 684 ; 5.982 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 237 ;33.982 ;24.852 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 964 ;16.392 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;23.335 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 847 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6059 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1097 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3397 ; 1.216 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1403 ; 0.177 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5496 ; 2.254 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2146 ; 1.912 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2010 ; 3.155 ; 4.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4FU0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JUL-12. REMARK 100 THE DEPOSITION ID IS D_1000073354. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98011 REMARK 200 MONOCHROMATOR : SI(111) CHANNEL-CUT REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57000 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 33.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.77800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1E4E REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5M AMMONIUM SULFATE, 0.9M LITHIUM REMARK 280 SULFATE, 0.1M SODIUM CITRATE, PH 5.6, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.07600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 118.15200 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 118.15200 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 59.07600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -144.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 89 REMARK 465 SER A 90 REMARK 465 ASP A 91 REMARK 465 LYS A 92 REMARK 465 GLU A 349 REMARK 465 LEU A 350 REMARK 465 GLU A 351 REMARK 465 HIS A 352 REMARK 465 HIS A 353 REMARK 465 HIS A 354 REMARK 465 HIS A 355 REMARK 465 HIS A 356 REMARK 465 HIS A 357 REMARK 465 MET B 1 REMARK 465 ALA B 89 REMARK 465 SER B 90 REMARK 465 ASP B 91 REMARK 465 LYS B 92 REMARK 465 GLU B 349 REMARK 465 LEU B 350 REMARK 465 GLU B 351 REMARK 465 HIS B 352 REMARK 465 HIS B 353 REMARK 465 HIS B 354 REMARK 465 HIS B 355 REMARK 465 HIS B 356 REMARK 465 HIS B 357 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 2 CG CD OE1 NE2 REMARK 470 LYS A 199 CG CD CE NZ REMARK 470 GLN B 2 CG CD OE1 NE2 REMARK 470 LYS B 97 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 186 44.20 -109.36 REMARK 500 ILE A 234 -61.20 -109.69 REMARK 500 ASN A 311 -73.77 -109.71 REMARK 500 ILE B 234 -64.20 -107.87 REMARK 500 ASN B 311 -71.59 -107.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 406 DBREF 4FU0 A 1 349 UNP Q6WRY5 Q6WRY5_ENTFL 1 349 DBREF 4FU0 B 1 349 UNP Q6WRY5 Q6WRY5_ENTFL 1 349 SEQADV 4FU0 LEU A 350 UNP Q6WRY5 EXPRESSION TAG SEQADV 4FU0 GLU A 351 UNP Q6WRY5 EXPRESSION TAG SEQADV 4FU0 HIS A 352 UNP Q6WRY5 EXPRESSION TAG SEQADV 4FU0 HIS A 353 UNP Q6WRY5 EXPRESSION TAG SEQADV 4FU0 HIS A 354 UNP Q6WRY5 EXPRESSION TAG SEQADV 4FU0 HIS A 355 UNP Q6WRY5 EXPRESSION TAG SEQADV 4FU0 HIS A 356 UNP Q6WRY5 EXPRESSION TAG SEQADV 4FU0 HIS A 357 UNP Q6WRY5 EXPRESSION TAG SEQADV 4FU0 LEU B 350 UNP Q6WRY5 EXPRESSION TAG SEQADV 4FU0 GLU B 351 UNP Q6WRY5 EXPRESSION TAG SEQADV 4FU0 HIS B 352 UNP Q6WRY5 EXPRESSION TAG SEQADV 4FU0 HIS B 353 UNP Q6WRY5 EXPRESSION TAG SEQADV 4FU0 HIS B 354 UNP Q6WRY5 EXPRESSION TAG SEQADV 4FU0 HIS B 355 UNP Q6WRY5 EXPRESSION TAG SEQADV 4FU0 HIS B 356 UNP Q6WRY5 EXPRESSION TAG SEQADV 4FU0 HIS B 357 UNP Q6WRY5 EXPRESSION TAG SEQRES 1 A 357 MET GLN ASN LYS LYS ILE ALA VAL ILE PHE GLY GLY ASN SEQRES 2 A 357 SER THR GLU TYR GLU VAL SER LEU GLN SER ALA SER ALA SEQRES 3 A 357 VAL PHE GLU ASN ILE ASN THR ASN LYS PHE ASP ILE ILE SEQRES 4 A 357 PRO ILE GLY ILE THR ARG SER GLY GLU TRP TYR HIS TYR SEQRES 5 A 357 THR GLY GLU LYS GLU LYS ILE LEU ASN ASN THR TRP PHE SEQRES 6 A 357 GLU ASP SER LYS ASN LEU CYS PRO VAL VAL VAL SER GLN SEQRES 7 A 357 ASN ARG SER VAL LYS GLY PHE LEU GLU ILE ALA SER ASP SEQRES 8 A 357 LYS TYR ARG ILE ILE LYS VAL ASP LEU VAL PHE PRO VAL SEQRES 9 A 357 LEU HIS GLY LYS ASN GLY GLU ASP GLY THR LEU GLN GLY SEQRES 10 A 357 ILE PHE GLU LEU ALA GLY ILE PRO VAL VAL GLY CYS ASP SEQRES 11 A 357 THR LEU SER SER ALA LEU CYS MET ASP LYS ASP ARG ALA SEQRES 12 A 357 HIS LYS LEU VAL SER LEU ALA GLY ILE SER VAL PRO LYS SEQRES 13 A 357 SER VAL THR PHE LYS ARG PHE ASN GLU GLU ALA ALA MET SEQRES 14 A 357 LYS GLU ILE GLU ALA ASN LEU THR TYR PRO LEU PHE ILE SEQRES 15 A 357 LYS PRO VAL ARG ALA GLY SER SER PHE GLY ILE THR LYS SEQRES 16 A 357 VAL ILE GLU LYS GLN GLU LEU ASP ALA ALA ILE GLU LEU SEQRES 17 A 357 ALA PHE GLU HIS ASP THR GLU VAL ILE VAL GLU GLU THR SEQRES 18 A 357 ILE ASN GLY PHE GLU VAL GLY CYS ALA VAL LEU GLY ILE SEQRES 19 A 357 ASP GLU LEU ILE VAL GLY ARG VAL ASP GLU ILE GLU LEU SEQRES 20 A 357 SER SER GLY PHE PHE ASP TYR THR GLU LYS TYR THR LEU SEQRES 21 A 357 LYS SER SER LYS ILE TYR MET PRO ALA ARG ILE ASP ALA SEQRES 22 A 357 GLU ALA GLU LYS ARG ILE GLN GLU ALA ALA VAL THR ILE SEQRES 23 A 357 TYR LYS ALA LEU GLY CYS SER GLY PHE SER ARG VAL ASP SEQRES 24 A 357 MET PHE TYR THR PRO SER GLY GLU ILE VAL PHE ASN GLU SEQRES 25 A 357 VAL ASN THR ILE PRO GLY PHE THR SER HIS SER ARG TYR SEQRES 26 A 357 PRO ASN MET MET LYS GLY ILE GLY LEU SER PHE SER GLN SEQRES 27 A 357 MET LEU ASP LYS LEU ILE GLY LEU TYR VAL GLU LEU GLU SEQRES 28 A 357 HIS HIS HIS HIS HIS HIS SEQRES 1 B 357 MET GLN ASN LYS LYS ILE ALA VAL ILE PHE GLY GLY ASN SEQRES 2 B 357 SER THR GLU TYR GLU VAL SER LEU GLN SER ALA SER ALA SEQRES 3 B 357 VAL PHE GLU ASN ILE ASN THR ASN LYS PHE ASP ILE ILE SEQRES 4 B 357 PRO ILE GLY ILE THR ARG SER GLY GLU TRP TYR HIS TYR SEQRES 5 B 357 THR GLY GLU LYS GLU LYS ILE LEU ASN ASN THR TRP PHE SEQRES 6 B 357 GLU ASP SER LYS ASN LEU CYS PRO VAL VAL VAL SER GLN SEQRES 7 B 357 ASN ARG SER VAL LYS GLY PHE LEU GLU ILE ALA SER ASP SEQRES 8 B 357 LYS TYR ARG ILE ILE LYS VAL ASP LEU VAL PHE PRO VAL SEQRES 9 B 357 LEU HIS GLY LYS ASN GLY GLU ASP GLY THR LEU GLN GLY SEQRES 10 B 357 ILE PHE GLU LEU ALA GLY ILE PRO VAL VAL GLY CYS ASP SEQRES 11 B 357 THR LEU SER SER ALA LEU CYS MET ASP LYS ASP ARG ALA SEQRES 12 B 357 HIS LYS LEU VAL SER LEU ALA GLY ILE SER VAL PRO LYS SEQRES 13 B 357 SER VAL THR PHE LYS ARG PHE ASN GLU GLU ALA ALA MET SEQRES 14 B 357 LYS GLU ILE GLU ALA ASN LEU THR TYR PRO LEU PHE ILE SEQRES 15 B 357 LYS PRO VAL ARG ALA GLY SER SER PHE GLY ILE THR LYS SEQRES 16 B 357 VAL ILE GLU LYS GLN GLU LEU ASP ALA ALA ILE GLU LEU SEQRES 17 B 357 ALA PHE GLU HIS ASP THR GLU VAL ILE VAL GLU GLU THR SEQRES 18 B 357 ILE ASN GLY PHE GLU VAL GLY CYS ALA VAL LEU GLY ILE SEQRES 19 B 357 ASP GLU LEU ILE VAL GLY ARG VAL ASP GLU ILE GLU LEU SEQRES 20 B 357 SER SER GLY PHE PHE ASP TYR THR GLU LYS TYR THR LEU SEQRES 21 B 357 LYS SER SER LYS ILE TYR MET PRO ALA ARG ILE ASP ALA SEQRES 22 B 357 GLU ALA GLU LYS ARG ILE GLN GLU ALA ALA VAL THR ILE SEQRES 23 B 357 TYR LYS ALA LEU GLY CYS SER GLY PHE SER ARG VAL ASP SEQRES 24 B 357 MET PHE TYR THR PRO SER GLY GLU ILE VAL PHE ASN GLU SEQRES 25 B 357 VAL ASN THR ILE PRO GLY PHE THR SER HIS SER ARG TYR SEQRES 26 B 357 PRO ASN MET MET LYS GLY ILE GLY LEU SER PHE SER GLN SEQRES 27 B 357 MET LEU ASP LYS LEU ILE GLY LEU TYR VAL GLU LEU GLU SEQRES 28 B 357 HIS HIS HIS HIS HIS HIS HET ADP A 401 27 HET SO4 A 402 5 HET SO4 A 403 5 HET SO4 A 404 5 HET SO4 A 405 5 HET ADP B 401 27 HET SO4 B 402 5 HET SO4 B 403 5 HET SO4 B 404 5 HET SO4 B 405 5 HET SO4 B 406 5 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM SO4 SULFATE ION FORMUL 3 ADP 2(C10 H15 N5 O10 P2) FORMUL 4 SO4 9(O4 S 2-) FORMUL 14 HOH *300(H2 O) HELIX 1 1 GLU A 16 ILE A 31 1 16 HELIX 2 2 LYS A 56 ASN A 61 1 6 HELIX 3 3 THR A 63 LYS A 69 5 7 HELIX 4 4 GLY A 107 ASP A 112 1 6 HELIX 5 5 GLY A 113 ALA A 122 1 10 HELIX 6 6 ASP A 130 ASP A 139 1 10 HELIX 7 7 ASP A 139 ALA A 150 1 12 HELIX 8 8 ASN A 164 LEU A 176 1 13 HELIX 9 9 GLU A 198 PHE A 210 1 13 HELIX 10 10 SER A 248 ASP A 253 1 6 HELIX 11 11 ASP A 272 LEU A 290 1 19 HELIX 12 12 SER A 323 GLY A 331 1 9 HELIX 13 13 SER A 335 LEU A 346 1 12 HELIX 14 14 GLU B 16 ILE B 31 1 16 HELIX 15 15 LYS B 56 ASN B 61 1 6 HELIX 16 16 ASP B 67 LYS B 69 5 3 HELIX 17 17 GLY B 107 ASP B 112 1 6 HELIX 18 18 GLY B 113 ALA B 122 1 10 HELIX 19 19 ASP B 130 ASP B 139 1 10 HELIX 20 20 ASP B 139 ALA B 150 1 12 HELIX 21 21 ASN B 164 LEU B 176 1 13 HELIX 22 22 GLU B 198 GLN B 200 5 3 HELIX 23 23 GLU B 201 GLU B 211 1 11 HELIX 24 24 ASP B 272 LEU B 290 1 19 HELIX 25 25 SER B 323 GLY B 331 1 9 HELIX 26 26 SER B 335 GLY B 345 1 11 SHEET 1 A 7 ARG A 94 LYS A 97 0 SHEET 2 A 7 GLY A 84 GLU A 87 -1 N GLU A 87 O ARG A 94 SHEET 3 A 7 LEU A 71 VAL A 76 -1 N VAL A 75 O LEU A 86 SHEET 4 A 7 TRP A 49 TYR A 52 -1 N HIS A 51 O CYS A 72 SHEET 5 A 7 PHE A 36 ILE A 43 -1 N GLY A 42 O TYR A 50 SHEET 6 A 7 LYS A 4 GLY A 11 1 N ILE A 6 O ASP A 37 SHEET 7 A 7 LEU A 100 PRO A 103 1 O PHE A 102 N ALA A 7 SHEET 1 B 4 SER A 157 LYS A 161 0 SHEET 2 B 4 GLU A 215 GLU A 220 -1 O VAL A 216 N PHE A 160 SHEET 3 B 4 LEU A 180 PRO A 184 -1 N LYS A 183 O ILE A 217 SHEET 4 B 4 THR A 194 VAL A 196 -1 O THR A 194 N ILE A 182 SHEET 1 C 4 LEU A 237 VAL A 239 0 SHEET 2 C 4 PHE A 225 GLY A 233 -1 N LEU A 232 O ILE A 238 SHEET 3 C 4 ASP A 243 LEU A 247 -1 O ILE A 245 N GLU A 226 SHEET 4 C 4 SER A 263 TYR A 266 -1 O TYR A 266 N GLU A 244 SHEET 1 D 4 LEU A 237 VAL A 239 0 SHEET 2 D 4 PHE A 225 GLY A 233 -1 N LEU A 232 O ILE A 238 SHEET 3 D 4 GLY A 294 TYR A 302 -1 O TYR A 302 N PHE A 225 SHEET 4 D 4 ILE A 308 ASN A 314 -1 O GLU A 312 N ASP A 299 SHEET 1 E 7 ARG B 94 LYS B 97 0 SHEET 2 E 7 GLY B 84 GLU B 87 -1 N GLU B 87 O ARG B 94 SHEET 3 E 7 LEU B 71 VAL B 76 -1 N VAL B 75 O LEU B 86 SHEET 4 E 7 TRP B 49 TYR B 52 -1 N HIS B 51 O CYS B 72 SHEET 5 E 7 PHE B 36 ILE B 43 -1 N GLY B 42 O TYR B 50 SHEET 6 E 7 LYS B 4 GLY B 11 1 N ILE B 6 O ILE B 39 SHEET 7 E 7 LEU B 100 PRO B 103 1 O PHE B 102 N ALA B 7 SHEET 1 F 4 SER B 157 LYS B 161 0 SHEET 2 F 4 GLU B 215 GLU B 220 -1 O VAL B 216 N PHE B 160 SHEET 3 F 4 LEU B 180 PRO B 184 -1 N LYS B 183 O ILE B 217 SHEET 4 F 4 THR B 194 VAL B 196 -1 O THR B 194 N ILE B 182 SHEET 1 G 4 ILE B 238 VAL B 239 0 SHEET 2 G 4 PHE B 225 GLY B 233 -1 N LEU B 232 O ILE B 238 SHEET 3 G 4 ASP B 243 LEU B 247 -1 O ILE B 245 N GLU B 226 SHEET 4 G 4 SER B 263 TYR B 266 -1 O TYR B 266 N GLU B 244 SHEET 1 H 4 ILE B 238 VAL B 239 0 SHEET 2 H 4 PHE B 225 GLY B 233 -1 N LEU B 232 O ILE B 238 SHEET 3 H 4 GLY B 294 TYR B 302 -1 O TYR B 302 N PHE B 225 SHEET 4 H 4 ILE B 308 ASN B 314 -1 O ASN B 314 N ARG B 297 CISPEP 1 TYR A 178 PRO A 179 0 -3.79 CISPEP 2 MET A 267 PRO A 268 0 9.17 CISPEP 3 TYR B 178 PRO B 179 0 3.61 CISPEP 4 MET B 267 PRO B 268 0 -0.82 SITE 1 AC1 21 LYS A 140 PHE A 181 LYS A 183 SER A 190 SITE 2 AC1 21 ILE A 193 GLU A 219 GLU A 220 THR A 221 SITE 3 AC1 21 ILE A 222 GLU A 226 LEU A 247 TYR A 258 SITE 4 AC1 21 LYS A 261 PHE A 301 ASN A 311 GLU A 312 SITE 5 AC1 21 HOH A 556 HOH A 588 HOH A 593 HOH A 637 SITE 6 AC1 21 TYR B 258 SITE 1 AC2 8 ARG A 297 ASN A 314 PRO A 317 GLY A 318 SITE 2 AC2 8 HOH A 501 HOH A 525 HOH A 575 LYS B 257 SITE 1 AC3 4 ASN A 223 THR A 303 PRO A 304 SER A 305 SITE 1 AC4 4 SER A 335 PHE A 336 HOH A 611 HOH A 612 SITE 1 AC5 4 LYS A 108 GLY A 188 SER A 189 HOH A 640 SITE 1 AC6 19 PHE B 181 LYS B 183 SER B 190 ILE B 193 SITE 2 AC6 19 GLU B 219 GLU B 220 THR B 221 ILE B 222 SITE 3 AC6 19 GLU B 226 LEU B 247 PHE B 252 PHE B 301 SITE 4 AC6 19 ASN B 311 GLU B 312 HOH B 503 HOH B 529 SITE 5 AC6 19 HOH B 540 HOH B 617 HOH B 649 SITE 1 AC7 8 ARG B 297 GLY B 318 SER B 323 ARG B 324 SITE 2 AC7 8 HOH B 501 HOH B 514 HOH B 633 HOH B 641 SITE 1 AC8 6 ASN B 223 THR B 303 PRO B 304 SER B 305 SITE 2 AC8 6 HOH B 594 HOH B 600 SITE 1 AC9 5 TYR A 254 ALA B 187 GLY B 188 SER B 189 SITE 2 AC9 5 HIS B 212 SITE 1 BC1 4 LYS A 330 LYS B 264 TYR B 266 ARG B 270 SITE 1 BC2 3 LYS B 330 SER B 335 PHE B 336 CRYST1 116.070 116.070 177.228 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008615 0.004974 0.000000 0.00000 SCALE2 0.000000 0.009948 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005642 0.00000