HEADER RNA BINDING PROTEIN 10-NOV-11 3ULH TITLE CRYSTAL STRUCTURE OF A RNA BINDING DOMAIN OF THO COMPLEX SUBUNIT 4 TITLE 2 PROTEIN (THOC4) FROM HOMO SAPIENS AT 2.54 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: THO COMPLEX SUBUNIT 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RNA BINDING DOMAIN; COMPND 5 SYNONYM: THO4, ALLY OF AML-1 AND LEF-1, TRANSCRIPTIONAL COACTIVATOR COMPND 6 ALY/REF, BZIP-ENHANCING FACTOR BEF; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ALY, BC052302, BEF, THOC4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS NUCLEAR PROTEIN, RNA BINDING, THO COMPLEX, STRUCTURAL GENOMICS, JOINT KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 PSI-BIOLOGY, RNA BINDING PROTEIN, PARTNERSHIP FOR T-CELL BIOLOGY, KEYWDS 4 TCELL EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG),PARTNERSHIP FOR T-CELL AUTHOR 2 BIOLOGY (TCELL) REVDAT 4 01-FEB-23 3ULH 1 REMARK SEQADV LINK REVDAT 3 08-NOV-17 3ULH 1 REMARK REVDAT 2 21-OCT-15 3ULH 1 AUTHOR REVDAT 1 07-DEC-11 3ULH 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG), JRNL AUTH 2 PARTNERSHIP FOR T-CELL BIOLOGY (TCELL) JRNL TITL CRYSTAL STRUCTURE OF A RNA BINDING DOMAIN OF THO COMPLEX JRNL TITL 2 SUBUNIT 4 PROTEIN (THOC4) FROM HOMO SAPIENS AT 2.54 A JRNL TITL 3 RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 6245 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 289 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.54 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.61 REMARK 3 REFLECTION IN BIN (WORKING SET) : 349 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3470 REMARK 3 BIN FREE R VALUE SET COUNT : 15 REMARK 3 BIN FREE R VALUE : 0.3830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 632 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 26 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.171 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.127 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.829 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 672 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 450 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 911 ; 1.958 ; 1.988 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1099 ; 0.913 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 89 ; 5.958 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 32 ;40.277 ;24.375 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 109 ;18.993 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;18.689 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 100 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 765 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 136 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 100 A 183 REMARK 3 ORIGIN FOR THE GROUP (A): 21.3150 9.8350 34.2970 REMARK 3 T TENSOR REMARK 3 T11: 0.3207 T22: 0.2449 REMARK 3 T33: 0.1967 T12: -0.0265 REMARK 3 T13: -0.0042 T23: 0.0316 REMARK 3 L TENSOR REMARK 3 L11: 4.6916 L22: 2.9984 REMARK 3 L33: 7.3375 L12: 0.0133 REMARK 3 L13: -1.4523 L23: -0.8582 REMARK 3 S TENSOR REMARK 3 S11: 0.2874 S12: 0.1811 S13: 0.0030 REMARK 3 S21: 0.0967 S22: -0.3135 S23: -0.2137 REMARK 3 S31: 0.0721 S32: 0.3183 S33: 0.0261 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL B FACTORS. 3. ANISOU RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS REMARK 3 ASSIGNMENT. 5. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 6. PHOSPHATE (PO4) MOLECULES FROM THE REMARK 3 CRYSTALLIZATION SOLUTION ARE MODELED. REMARK 4 REMARK 4 3ULH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-NOV-11. REMARK 100 THE DEPOSITION ID IS D_1000068903. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537,0.9796,0.9794 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : KOHZU: DOUBLE CRYSTAL SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6271 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.540 REMARK 200 RESOLUTION RANGE LOW (A) : 29.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08600 REMARK 200 FOR THE DATA SET : 16.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.30 REMARK 200 R MERGE FOR SHELL (I) : 0.01100 REMARK 200 R SYM FOR SHELL (I) : 1.13600 REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25.0% GLYCEROL, 0.6M DI-SODIUM REMARK 280 HYDROGEN PHOSPHATE, 0.6M POTASSIUM DIHYDROGEN PHOSPHATE, 0.1M REMARK 280 HEPES PH 7.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 50.57600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.57600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.57600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.57600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 50.57600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.57600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 50.57600 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 50.57600 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 50.57600 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 50.57600 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 50.57600 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 50.57600 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 50.57600 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 50.57600 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 50.57600 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 50.57600 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 50.57600 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 50.57600 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 75.86400 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 25.28800 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 25.28800 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 75.86400 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 75.86400 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 75.86400 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 25.28800 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 25.28800 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 75.86400 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 25.28800 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 75.86400 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 25.28800 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 75.86400 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 25.28800 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 25.28800 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 25.28800 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 75.86400 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 25.28800 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 75.86400 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 75.86400 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 75.86400 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 25.28800 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 25.28800 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 75.86400 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 75.86400 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 25.28800 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 25.28800 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 25.28800 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 25.28800 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 75.86400 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 25.28800 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 75.86400 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 25.28800 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 75.86400 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 75.86400 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 75.86400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A DIMER REMARK 300 AS THE SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 25.28800 REMARK 350 BIOMT2 2 0.000000 0.000000 1.000000 -25.28800 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 25.28800 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 P PO4 A 201 LIES ON A SPECIAL POSITION. REMARK 375 O1 PO4 A 201 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 SER A 78 REMARK 465 ARG A 79 REMARK 465 PRO A 80 REMARK 465 LYS A 81 REMARK 465 GLN A 82 REMARK 465 LEU A 83 REMARK 465 PRO A 84 REMARK 465 ASP A 85 REMARK 465 LYS A 86 REMARK 465 TRP A 87 REMARK 465 GLN A 88 REMARK 465 HIS A 89 REMARK 465 ASP A 90 REMARK 465 LEU A 91 REMARK 465 PHE A 92 REMARK 465 ASP A 93 REMARK 465 SER A 94 REMARK 465 GLY A 95 REMARK 465 PHE A 96 REMARK 465 GLY A 97 REMARK 465 GLY A 98 REMARK 465 GLY A 99 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 164 CG CD CE NZ REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 422757 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 78-183 OF THE TARGET REMARK 999 SEQUENCE. DBREF 3ULH A 78 183 UNP Q86V81 THOC4_HUMAN 78 183 SEQADV 3ULH GLY A 0 UNP Q86V81 EXPRESSION TAG SEQRES 1 A 107 GLY SER ARG PRO LYS GLN LEU PRO ASP LYS TRP GLN HIS SEQRES 2 A 107 ASP LEU PHE ASP SER GLY PHE GLY GLY GLY ALA GLY VAL SEQRES 3 A 107 GLU THR GLY GLY LYS LEU LEU VAL SER ASN LEU ASP PHE SEQRES 4 A 107 GLY VAL SER ASP ALA ASP ILE GLN GLU LEU PHE ALA GLU SEQRES 5 A 107 PHE GLY THR LEU LYS LYS ALA ALA VAL HIS TYR ASP ARG SEQRES 6 A 107 SER GLY ARG SER LEU GLY THR ALA ASP VAL HIS PHE GLU SEQRES 7 A 107 ARG LYS ALA ASP ALA LEU LYS ALA MSE LYS GLN TYR ASN SEQRES 8 A 107 GLY VAL PRO LEU ASP GLY ARG PRO MSE ASN ILE GLN LEU SEQRES 9 A 107 VAL THR SER MODRES 3ULH MSE A 163 MET SELENOMETHIONINE MODRES 3ULH MSE A 176 MET SELENOMETHIONINE HET MSE A 163 8 HET MSE A 176 8 HET PO4 A 200 5 HET PO4 A 201 5 HETNAM MSE SELENOMETHIONINE HETNAM PO4 PHOSPHATE ION FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 2 PO4 2(O4 P 3-) FORMUL 4 HOH *26(H2 O) HELIX 1 1 SER A 118 GLU A 128 1 11 HELIX 2 2 ARG A 155 ASN A 167 1 13 SHEET 1 A 4 LEU A 132 TYR A 139 0 SHEET 2 A 4 SER A 145 PHE A 153 -1 O HIS A 152 N LYS A 133 SHEET 3 A 4 GLY A 106 SER A 111 -1 N GLY A 106 O PHE A 153 SHEET 4 A 4 ASN A 177 VAL A 181 -1 O VAL A 181 N LYS A 107 SHEET 1 B 2 PRO A 170 LEU A 171 0 SHEET 2 B 2 ARG A 174 PRO A 175 -1 O ARG A 174 N LEU A 171 LINK C ALA A 162 N MSE A 163 1555 1555 1.33 LINK C MSE A 163 N LYS A 164 1555 1555 1.35 LINK C PRO A 175 N MSE A 176 1555 1555 1.32 LINK C MSE A 176 N ASN A 177 1555 1555 1.33 SITE 1 AC1 5 ASN A 112 GLY A 173 ARG A 174 PRO A 175 SITE 2 AC1 5 PO4 A 201 SITE 1 AC2 2 ARG A 174 PO4 A 200 CRYST1 101.152 101.152 101.152 90.00 90.00 90.00 P 41 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009886 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009886 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009886 0.00000