HEADER IMMUNE SYSTEM 27-JUL-10 3O4O TITLE CRYSTAL STRUCTURE OF AN INTERLEUKIN-1 RECEPTOR COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERLEUKIN-1 BETA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: IL-1BETA, IL-1 BETA, CATABOLIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: INTERLEUKIN-1 RECEPTOR TYPE 2; COMPND 8 CHAIN: C; COMPND 9 FRAGMENT: IL-1RII ECTODOMAIN, RESIDUES 14-343; COMPND 10 SYNONYM: IL-1RII, IL-1RT-2, IL-1RT2, IL-1R-2, INTERLEUKIN-1 RECEPTOR COMPND 11 TYPE II, INTERLEUKIN-1 RECEPTOR BETA, IL-1R-BETA, CD121 ANTIGEN-LIKE COMPND 12 FAMILY MEMBER B, CDW121B; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: INTERLEUKIN-1 RECEPTOR ACCESSORY PROTEIN; COMPND 16 CHAIN: B; COMPND 17 FRAGMENT: IL-1RACP ECTODOMAIN, RESIDUES 21-350; COMPND 18 SYNONYM: IL-1RACP, IL-1 RECEPTOR ACCESSORY PROTEIN, INTERLEUKIN-1 COMPND 19 RECEPTOR 3, IL-1R-3, IL-1R3; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 15 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 17 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 19 EXPRESSION_SYSTEM_VECTOR: PACGP67-A; SOURCE 20 MOL_ID: 3; SOURCE 21 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 22 ORGANISM_COMMON: HUMAN; SOURCE 23 ORGANISM_TAXID: 9606; SOURCE 24 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 25 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 27 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 28 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 29 EXPRESSION_SYSTEM_VECTOR: PACGP67-A KEYWDS CYTOKINE-RECEPTOR COMPLEX, BETA-TREFOIL, IG-LIKE FOLD, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR X.Q.WANG,D.L.WANG,S.Y.ZHANG,L.LI,X.LIU,K.R.MEI REVDAT 4 29-JUL-20 3O4O 1 COMPND REMARK SEQADV HETNAM REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 20-OCT-10 3O4O 1 JRNL REVDAT 2 08-SEP-10 3O4O 1 JRNL REVDAT 1 01-SEP-10 3O4O 0 JRNL AUTH D.L.WANG,S.Y.ZHANG,L.LI,X.LIU,K.R.MEI,X.Q.WANG JRNL TITL STRUCTURAL INSIGHTS INTO THE ASSEMBLY AND ACTIVATION OF JRNL TITL 2 IL-1BETA WITH ITS RECEPTORS JRNL REF NAT.IMMUNOL. V. 11 905 2010 JRNL REFN ISSN 1529-2908 JRNL PMID 20802483 JRNL DOI 10.1038/NI.1925 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 21443 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.253 REMARK 3 R VALUE (WORKING SET) : 0.252 REMARK 3 FREE R VALUE : 0.289 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1101 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.5869 - 6.5894 0.99 2830 160 0.2777 0.3283 REMARK 3 2 6.5894 - 5.2351 1.00 2721 151 0.2461 0.2674 REMARK 3 3 5.2351 - 4.5748 1.00 2664 146 0.1986 0.2489 REMARK 3 4 4.5748 - 4.1572 1.00 2649 151 0.2058 0.2578 REMARK 3 5 4.1572 - 3.8595 1.00 2694 126 0.2571 0.3017 REMARK 3 6 3.8595 - 3.6322 1.00 2631 134 0.2604 0.2855 REMARK 3 7 3.6322 - 3.4504 0.99 2563 148 0.2870 0.3273 REMARK 3 8 3.4504 - 3.3003 0.60 1590 85 0.3147 0.3283 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.29 REMARK 3 B_SOL : 70.26 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.020 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -20.59630 REMARK 3 B22 (A**2) : -22.62510 REMARK 3 B33 (A**2) : -20.51560 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 6877 REMARK 3 ANGLE : 1.120 9262 REMARK 3 CHIRALITY : 0.069 1022 REMARK 3 PLANARITY : 0.006 1146 REMARK 3 DIHEDRAL : 26.335 4061 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3O4O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000060660. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22655 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 43.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.400 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: PDB ENTRY 2I1B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17% PEG 10000, 0.1M BIS-TRIS, PH 5.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.41500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 90.33000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 88.73500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 90.33000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.41500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 88.73500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHOR STATES THAT THE BIOLOGICAL ASSEMBLY IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 SER A 153 REMARK 465 ALA C -2 REMARK 465 ASP C -1 REMARK 465 PRO C 0 REMARK 465 PHE C 1 REMARK 465 THR C 2 REMARK 465 LEU C 3 REMARK 465 GLN C 4 REMARK 465 PRO C 5 REMARK 465 ALA C 6 REMARK 465 ALA C 7 REMARK 465 HIS C 8 REMARK 465 THR C 9 REMARK 465 GLY C 10 REMARK 465 ALA C 11 REMARK 465 ALA C 12 REMARK 465 ARG C 13 REMARK 465 SER C 14 REMARK 465 HIS C 331 REMARK 465 HIS C 332 REMARK 465 HIS C 333 REMARK 465 HIS C 334 REMARK 465 HIS C 335 REMARK 465 HIS C 336 REMARK 465 ALA B -2 REMARK 465 ASP B -1 REMARK 465 PRO B 0 REMARK 465 SER B 1 REMARK 465 GLU B 2 REMARK 465 ARG B 3 REMARK 465 VAL B 327 REMARK 465 LYS B 328 REMARK 465 GLN B 329 REMARK 465 LYS B 330 REMARK 465 HIS B 331 REMARK 465 HIS B 332 REMARK 465 HIS B 333 REMARK 465 HIS B 334 REMARK 465 HIS B 335 REMARK 465 HIS B 336 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS C 139 CB CYS C 194 1.69 REMARK 500 O ASN C 99 N TYR C 102 1.99 REMARK 500 CB CYS C 139 SG CYS C 194 2.04 REMARK 500 ND2 ASN C 206 C2 NAG C 338 2.09 REMARK 500 ND2 ASN C 99 O5 NAG C 337 2.10 REMARK 500 SG CYS C 15 CB CYS C 103 2.11 REMARK 500 ND2 ASN B 87 C2 NAG B 337 2.16 REMARK 500 O TYR B 234 O ALA B 325 2.17 REMARK 500 SG CYS C 37 CB CYS C 95 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 2 -78.01 -87.56 REMARK 500 GLN A 14 30.42 -98.63 REMARK 500 GLN A 15 -7.71 72.63 REMARK 500 SER A 21 64.73 -164.25 REMARK 500 PRO A 23 32.32 -76.23 REMARK 500 GLU A 37 29.64 -78.15 REMARK 500 SER A 52 142.43 -179.06 REMARK 500 GLU A 64 15.43 52.89 REMARK 500 ASP A 75 49.77 70.59 REMARK 500 ASN A 108 -1.82 62.45 REMARK 500 GLN C 39 7.40 49.80 REMARK 500 TRP C 43 -0.96 67.22 REMARK 500 LEU C 44 87.49 -69.50 REMARK 500 VAL C 48 -23.86 -145.31 REMARK 500 SER C 49 155.73 -46.11 REMARK 500 PRO C 50 82.52 16.71 REMARK 500 GLU C 70 -118.04 -94.35 REMARK 500 ASP C 77 90.81 -59.43 REMARK 500 GLU C 88 -23.74 101.80 REMARK 500 ALA C 100 -32.51 -37.65 REMARK 500 CYS C 103 138.82 -172.72 REMARK 500 ASN C 115 45.60 -74.44 REMARK 500 ASP C 141 80.01 45.98 REMARK 500 LEU C 142 -0.29 -148.36 REMARK 500 THR C 150 88.36 -61.97 REMARK 500 ASP C 151 94.25 -56.50 REMARK 500 VAL C 152 88.27 42.64 REMARK 500 ALA C 199 83.95 -151.58 REMARK 500 GLU C 201 13.71 57.08 REMARK 500 GLU C 221 101.83 -160.74 REMARK 500 ILE C 227 24.35 -141.58 REMARK 500 THR C 232 96.26 -39.40 REMARK 500 ALA C 235 166.48 161.64 REMARK 500 SER C 236 -9.63 173.72 REMARK 500 LEU C 237 26.25 85.22 REMARK 500 SER C 239 -19.27 75.06 REMARK 500 THR C 253 53.06 -148.10 REMARK 500 PRO C 254 40.60 -72.76 REMARK 500 LEU C 255 -99.52 -76.56 REMARK 500 ASN C 264 -48.63 160.55 REMARK 500 HIS C 267 -7.17 87.80 REMARK 500 ILE C 268 -4.12 68.55 REMARK 500 SER C 270 39.33 39.14 REMARK 500 ALA C 271 -56.08 -169.74 REMARK 500 PRO C 281 -177.19 -61.69 REMARK 500 SER C 286 -50.73 72.96 REMARK 500 GLU C 287 -129.32 42.81 REMARK 500 ASN C 289 -72.25 -39.58 REMARK 500 MET C 309 139.12 -176.95 REMARK 500 LYS C 329 -172.19 103.82 REMARK 500 REMARK 500 THIS ENTRY HAS 82 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 3O4O A 1 153 UNP P01584 IL1B_HUMAN 117 269 DBREF 3O4O C 1 330 UNP P27930 IL1R2_HUMAN 14 343 DBREF 3O4O B 1 330 UNP Q9NPH3 IL1AP_HUMAN 21 350 SEQADV 3O4O GLY A -4 UNP P01584 EXPRESSION TAG SEQADV 3O4O PRO A -3 UNP P01584 EXPRESSION TAG SEQADV 3O4O LEU A -2 UNP P01584 EXPRESSION TAG SEQADV 3O4O GLY A -1 UNP P01584 EXPRESSION TAG SEQADV 3O4O SER A 0 UNP P01584 EXPRESSION TAG SEQADV 3O4O ALA C -2 UNP P27930 EXPRESSION TAG SEQADV 3O4O ASP C -1 UNP P27930 EXPRESSION TAG SEQADV 3O4O PRO C 0 UNP P27930 EXPRESSION TAG SEQADV 3O4O HIS C 331 UNP P27930 EXPRESSION TAG SEQADV 3O4O HIS C 332 UNP P27930 EXPRESSION TAG SEQADV 3O4O HIS C 333 UNP P27930 EXPRESSION TAG SEQADV 3O4O HIS C 334 UNP P27930 EXPRESSION TAG SEQADV 3O4O HIS C 335 UNP P27930 EXPRESSION TAG SEQADV 3O4O HIS C 336 UNP P27930 EXPRESSION TAG SEQADV 3O4O ALA B -2 UNP Q9NPH3 EXPRESSION TAG SEQADV 3O4O ASP B -1 UNP Q9NPH3 EXPRESSION TAG SEQADV 3O4O PRO B 0 UNP Q9NPH3 EXPRESSION TAG SEQADV 3O4O HIS B 331 UNP Q9NPH3 EXPRESSION TAG SEQADV 3O4O HIS B 332 UNP Q9NPH3 EXPRESSION TAG SEQADV 3O4O HIS B 333 UNP Q9NPH3 EXPRESSION TAG SEQADV 3O4O HIS B 334 UNP Q9NPH3 EXPRESSION TAG SEQADV 3O4O HIS B 335 UNP Q9NPH3 EXPRESSION TAG SEQADV 3O4O HIS B 336 UNP Q9NPH3 EXPRESSION TAG SEQRES 1 A 158 GLY PRO LEU GLY SER ALA PRO VAL ARG SER LEU ASN CYS SEQRES 2 A 158 THR LEU ARG ASP SER GLN GLN LYS SER LEU VAL MET SER SEQRES 3 A 158 GLY PRO TYR GLU LEU LYS ALA LEU HIS LEU GLN GLY GLN SEQRES 4 A 158 ASP MET GLU GLN GLN VAL VAL PHE SER MET SER PHE VAL SEQRES 5 A 158 GLN GLY GLU GLU SER ASN ASP LYS ILE PRO VAL ALA LEU SEQRES 6 A 158 GLY LEU LYS GLU LYS ASN LEU TYR LEU SER CYS VAL LEU SEQRES 7 A 158 LYS ASP ASP LYS PRO THR LEU GLN LEU GLU SER VAL ASP SEQRES 8 A 158 PRO LYS ASN TYR PRO LYS LYS LYS MET GLU LYS ARG PHE SEQRES 9 A 158 VAL PHE ASN LYS ILE GLU ILE ASN ASN LYS LEU GLU PHE SEQRES 10 A 158 GLU SER ALA GLN PHE PRO ASN TRP TYR ILE SER THR SER SEQRES 11 A 158 GLN ALA GLU ASN MET PRO VAL PHE LEU GLY GLY THR LYS SEQRES 12 A 158 GLY GLY GLN ASP ILE THR ASP PHE THR MET GLN PHE VAL SEQRES 13 A 158 SER SER SEQRES 1 C 339 ALA ASP PRO PHE THR LEU GLN PRO ALA ALA HIS THR GLY SEQRES 2 C 339 ALA ALA ARG SER CYS ARG PHE ARG GLY ARG HIS TYR LYS SEQRES 3 C 339 ARG GLU PHE ARG LEU GLU GLY GLU PRO VAL ALA LEU ARG SEQRES 4 C 339 CYS PRO GLN VAL PRO TYR TRP LEU TRP ALA SER VAL SER SEQRES 5 C 339 PRO ARG ILE ASN LEU THR TRP HIS LYS ASN ASP SER ALA SEQRES 6 C 339 ARG THR VAL PRO GLY GLU GLU GLU THR ARG MET TRP ALA SEQRES 7 C 339 GLN ASP GLY ALA LEU TRP LEU LEU PRO ALA LEU GLN GLU SEQRES 8 C 339 ASP SER GLY THR TYR VAL CYS THR THR ARG ASN ALA SER SEQRES 9 C 339 TYR CYS ASP LYS MET SER ILE GLU LEU ARG VAL PHE GLU SEQRES 10 C 339 ASN THR ASP ALA PHE LEU PRO PHE ILE SER TYR PRO GLN SEQRES 11 C 339 ILE LEU THR LEU SER THR SER GLY VAL LEU VAL CYS PRO SEQRES 12 C 339 ASP LEU SER GLU PHE THR ARG ASP LYS THR ASP VAL LYS SEQRES 13 C 339 ILE GLN TRP TYR LYS ASP SER LEU LEU LEU ASP LYS ASP SEQRES 14 C 339 ASN GLU LYS PHE LEU SER VAL ARG GLY THR THR HIS LEU SEQRES 15 C 339 LEU VAL HIS ASP VAL ALA LEU GLU ASP ALA GLY TYR TYR SEQRES 16 C 339 ARG CYS VAL LEU THR PHE ALA HIS GLU GLY GLN GLN TYR SEQRES 17 C 339 ASN ILE THR ARG SER ILE GLU LEU ARG ILE LYS LYS LYS SEQRES 18 C 339 LYS GLU GLU THR ILE PRO VAL ILE ILE SER PRO LEU LYS SEQRES 19 C 339 THR ILE SER ALA SER LEU GLY SER ARG LEU THR ILE PRO SEQRES 20 C 339 CYS LYS VAL PHE LEU GLY THR GLY THR PRO LEU THR THR SEQRES 21 C 339 MET LEU TRP TRP THR ALA ASN ASP THR HIS ILE GLU SER SEQRES 22 C 339 ALA TYR PRO GLY GLY ARG VAL THR GLU GLY PRO ARG GLN SEQRES 23 C 339 GLU TYR SER GLU ASN ASN GLU ASN TYR ILE GLU VAL PRO SEQRES 24 C 339 LEU ILE PHE ASP PRO VAL THR ARG GLU ASP LEU HIS MET SEQRES 25 C 339 ASP PHE LYS CYS VAL VAL HIS ASN THR LEU SER PHE GLN SEQRES 26 C 339 THR LEU ARG THR THR VAL LYS GLU HIS HIS HIS HIS HIS SEQRES 27 C 339 HIS SEQRES 1 B 339 ALA ASP PRO SER GLU ARG CYS ASP ASP TRP GLY LEU ASP SEQRES 2 B 339 THR MET ARG GLN ILE GLN VAL PHE GLU ASP GLU PRO ALA SEQRES 3 B 339 ARG ILE LYS CYS PRO LEU PHE GLU HIS PHE LEU LYS PHE SEQRES 4 B 339 ASN TYR SER THR ALA HIS SER ALA GLY LEU THR LEU ILE SEQRES 5 B 339 TRP TYR TRP THR ARG GLN ASP ARG ASP LEU GLU GLU PRO SEQRES 6 B 339 ILE ASN PHE ARG LEU PRO GLU ASN ARG ILE SER LYS GLU SEQRES 7 B 339 LYS ASP VAL LEU TRP PHE ARG PRO THR LEU LEU ASN ASP SEQRES 8 B 339 THR GLY ASN TYR THR CYS MET LEU ARG ASN THR THR TYR SEQRES 9 B 339 CYS SER LYS VAL ALA PHE PRO LEU GLU VAL VAL GLN LYS SEQRES 10 B 339 ASP SER CYS PHE ASN SER PRO MET LYS LEU PRO VAL HIS SEQRES 11 B 339 LYS LEU TYR ILE GLU TYR GLY ILE GLN ARG ILE THR CYS SEQRES 12 B 339 PRO ASN VAL ASP GLY TYR PHE PRO SER SER VAL LYS PRO SEQRES 13 B 339 THR ILE THR TRP TYR MET GLY CYS TYR LYS ILE GLN ASN SEQRES 14 B 339 PHE ASN ASN VAL ILE PRO GLU GLY MET ASN LEU SER PHE SEQRES 15 B 339 LEU ILE ALA LEU ILE SER ASN ASN GLY ASN TYR THR CYS SEQRES 16 B 339 VAL VAL THR TYR PRO GLU ASN GLY ARG THR PHE HIS LEU SEQRES 17 B 339 THR ARG THR LEU THR VAL LYS VAL VAL GLY SER PRO LYS SEQRES 18 B 339 ASN ALA VAL PRO PRO VAL ILE HIS SER PRO ASN ASP HIS SEQRES 19 B 339 VAL VAL TYR GLU LYS GLU PRO GLY GLU GLU LEU LEU ILE SEQRES 20 B 339 PRO CYS THR VAL TYR PHE SER PHE LEU MET ASP SER ARG SEQRES 21 B 339 ASN GLU VAL TRP TRP THR ILE ASP GLY LYS LYS PRO ASP SEQRES 22 B 339 ASP ILE THR ILE ASP VAL THR ILE ASN GLU SER ILE SER SEQRES 23 B 339 HIS SER ARG THR GLU ASP GLU THR ARG THR GLN ILE LEU SEQRES 24 B 339 SER ILE LYS LYS VAL THR SER GLU ASP LEU LYS ARG SER SEQRES 25 B 339 TYR VAL CYS HIS ALA ARG SER ALA LYS GLY GLU VAL ALA SEQRES 26 B 339 LYS ALA ALA LYS VAL LYS GLN LYS HIS HIS HIS HIS HIS SEQRES 27 B 339 HIS MODRES 3O4O ASN B 87 ASN GLYCOSYLATION SITE MODRES 3O4O ASN B 98 ASN GLYCOSYLATION SITE MODRES 3O4O ASN C 99 ASN GLYCOSYLATION SITE MODRES 3O4O ASN C 206 ASN GLYCOSYLATION SITE MODRES 3O4O ASN B 189 ASN GLYCOSYLATION SITE MODRES 3O4O ASN B 91 ASN GLYCOSYLATION SITE HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET NAG C 337 14 HET NAG C 338 14 HET NAG B 337 14 HET NAG B 340 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE FORMUL 4 NAG 8(C8 H15 N O6) HELIX 1 1 GLN A 32 GLN A 39 5 8 HELIX 2 2 THR C 116 ALA C 118 5 3 HELIX 3 3 PHE C 119 SER C 124 1 6 HELIX 4 4 ALA C 185 ALA C 189 5 5 HELIX 5 5 LEU B 85 THR B 89 5 5 HELIX 6 6 LEU B 183 ASN B 187 5 5 HELIX 7 7 SER B 216 ALA B 220 5 5 SHEET 1 A 7 SER A 5 ASP A 12 0 SHEET 2 A 7 PHE A 42 PHE A 46 -1 O PHE A 42 N CYS A 8 SHEET 3 A 7 ILE A 56 LEU A 62 -1 O GLY A 61 N SER A 43 SHEET 4 A 7 PHE A 101 ILE A 106 -1 O PHE A 101 N VAL A 58 SHEET 5 A 7 LYS A 109 SER A 114 -1 O LYS A 109 N ILE A 106 SHEET 6 A 7 PHE A 146 PHE A 150 -1 O PHE A 146 N LEU A 110 SHEET 7 A 7 SER A 5 ASP A 12 -1 N ARG A 11 O THR A 147 SHEET 1 B 2 SER A 17 MET A 20 0 SHEET 2 B 2 LEU A 26 LEU A 29 -1 O LYS A 27 N VAL A 19 SHEET 1 C 2 LEU A 67 LEU A 73 0 SHEET 2 C 2 PRO A 78 SER A 84 -1 O GLN A 81 N SER A 70 SHEET 1 D 2 TYR A 121 SER A 123 0 SHEET 2 D 2 PHE A 133 GLY A 135 -1 O GLY A 135 N TYR A 121 SHEET 1 E 4 ARG C 16 ARG C 20 0 SHEET 2 E 4 TYR C 102 PHE C 113 1 O LYS C 105 N ARG C 18 SHEET 3 E 4 GLY C 91 VAL C 94 -1 N GLY C 91 O LEU C 110 SHEET 4 E 4 HIS C 57 LYS C 58 -1 N HIS C 57 O VAL C 94 SHEET 1 F 3 GLU C 25 LEU C 28 0 SHEET 2 F 3 TYR C 102 PHE C 113 1 O PHE C 113 N ARG C 27 SHEET 3 F 3 THR C 97 ASN C 99 -1 N ASN C 99 O TYR C 102 SHEET 1 G 3 ALA C 34 ARG C 36 0 SHEET 2 G 3 ALA C 79 LEU C 82 -1 O LEU C 80 N LEU C 35 SHEET 3 G 3 MET C 73 GLN C 76 -1 N GLN C 76 O ALA C 79 SHEET 1 H 4 TYR C 125 THR C 130 0 SHEET 2 H 4 ASN C 206 LYS C 216 1 O GLU C 212 N TYR C 125 SHEET 3 H 4 GLY C 190 THR C 197 -1 N TYR C 192 O ILE C 211 SHEET 4 H 4 TYR C 157 LYS C 158 -1 N TYR C 157 O ARG C 193 SHEET 1 I 3 GLY C 135 VAL C 138 0 SHEET 2 I 3 HIS C 178 VAL C 181 -1 O LEU C 179 N LEU C 137 SHEET 3 I 3 PHE C 170 SER C 172 -1 N LEU C 171 O LEU C 180 SHEET 1 J 4 VAL C 225 ILE C 226 0 SHEET 2 J 4 VAL C 247 LEU C 249 -1 O PHE C 248 N VAL C 225 SHEET 3 J 4 TYR C 292 VAL C 295 -1 O TYR C 292 N LEU C 249 SHEET 4 J 4 GLN C 283 GLU C 284 -1 N GLN C 283 O VAL C 295 SHEET 1 K 3 MET C 258 THR C 262 0 SHEET 2 K 3 LYS C 312 ASN C 317 -1 O HIS C 316 N MET C 258 SHEET 3 K 3 SER C 320 GLN C 322 -1 O GLN C 322 N VAL C 315 SHEET 1 L 2 THR C 278 GLU C 279 0 SHEET 2 L 2 ILE C 298 PHE C 299 -1 O PHE C 299 N THR C 278 SHEET 1 M 3 ASP B 5 TRP B 7 0 SHEET 2 M 3 SER B 103 VAL B 112 1 O LYS B 104 N TRP B 7 SHEET 3 M 3 ILE B 15 PHE B 18 1 N VAL B 17 O VAL B 112 SHEET 1 N 4 ASP B 5 TRP B 7 0 SHEET 2 N 4 SER B 103 VAL B 112 1 O LYS B 104 N TRP B 7 SHEET 3 N 4 GLY B 90 ARG B 97 -1 N GLY B 90 O LEU B 109 SHEET 4 N 4 THR B 47 TRP B 52 -1 N ILE B 49 O MET B 95 SHEET 1 O 4 VAL B 126 TYR B 130 0 SHEET 2 O 4 THR B 202 VAL B 214 1 O VAL B 214 N LEU B 129 SHEET 3 O 4 GLY B 188 PRO B 197 -1 N TYR B 190 O LEU B 209 SHEET 4 O 4 THR B 154 TYR B 158 -1 N THR B 154 O THR B 195 SHEET 1 P 3 GLN B 136 THR B 139 0 SHEET 2 P 3 ASN B 176 PHE B 179 -1 O LEU B 177 N ILE B 138 SHEET 3 P 3 VAL B 170 GLU B 173 -1 N GLU B 173 O ASN B 176 SHEET 1 Q 4 VAL B 224 ILE B 225 0 SHEET 2 Q 4 CYS B 246 TYR B 249 -1 O TYR B 249 N VAL B 224 SHEET 3 Q 4 GLU B 290 ILE B 298 -1 O ARG B 292 N VAL B 248 SHEET 4 Q 4 VAL B 276 HIS B 284 -1 N SER B 283 O THR B 291 SHEET 1 R 3 GLU B 259 THR B 263 0 SHEET 2 R 3 VAL B 311 ARG B 315 -1 O VAL B 311 N THR B 263 SHEET 3 R 3 GLY B 319 LYS B 323 -1 O GLU B 320 N ALA B 314 SSBOND 1 CYS C 15 CYS C 103 1555 1555 1.90 SSBOND 2 CYS C 37 CYS C 95 1555 1555 1.99 SSBOND 3 CYS C 139 CYS C 194 1555 1555 1.86 SSBOND 4 CYS C 245 CYS C 313 1555 1555 1.82 SSBOND 5 CYS B 4 CYS B 102 1555 1555 2.00 SSBOND 6 CYS B 27 CYS B 94 1555 1555 2.08 SSBOND 7 CYS B 117 CYS B 161 1555 1555 2.20 SSBOND 8 CYS B 140 CYS B 192 1555 1555 2.10 SSBOND 9 CYS B 246 CYS B 312 1555 1555 2.03 LINK ND2 ASN C 99 C1 NAG C 337 1555 1555 1.44 LINK ND2 ASN C 206 C1 NAG C 338 1555 1555 1.45 LINK ND2 ASN B 87 C1 NAG B 337 1555 1555 1.44 LINK ND2 ASN B 91 C1 NAG D 1 1555 1555 1.46 LINK ND2 ASN B 98 C1 NAG B 340 1555 1555 1.44 LINK ND2 ASN B 189 C1 NAG E 1 1555 1555 1.46 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 CISPEP 1 GLY A 22 PRO A 23 0 -0.17 CISPEP 2 TYR A 90 PRO A 91 0 -3.41 CISPEP 3 VAL C 65 PRO C 66 0 1.99 CISPEP 4 LEU C 83 PRO C 84 0 -6.12 CISPEP 5 LEU B 67 PRO B 68 0 -0.72 CISPEP 6 ARG B 82 PRO B 83 0 -5.61 CRYST1 44.830 177.470 180.660 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022306 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005635 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005535 0.00000