HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-FEB-07 2P0N TITLE NMB1532 PROTEIN FROM NEISSERIA MENINGITIDIS, UNKNOWN FUNCTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN NMB1532; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA MENINGITIDIS; SOURCE 3 ORGANISM_TAXID: 122586; SOURCE 4 STRAIN: MC58; SOURCE 5 GENE: NMB1532; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, APC83866, UNKNOWN FUNCTION, PSI-2, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,H.LI,M.BARGASSA,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 3 13-JUL-11 2P0N 1 VERSN REVDAT 2 24-FEB-09 2P0N 1 VERSN REVDAT 1 27-MAR-07 2P0N 0 JRNL AUTH J.OSIPIUK,H.LI,M.BARGASSA,A.JOACHIMIAK JRNL TITL X-RAY CRYSTAL STRUCTURE OF NMB1532 PROTEIN OF UNKNOWN JRNL TITL 2 FUNCTION FROM NEISSERIA MENINGITIDIS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 3 NUMBER OF REFLECTIONS : 58977 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3128 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.41 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.45 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2826 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 61.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.2560 REMARK 3 BIN FREE R VALUE SET COUNT : 148 REMARK 3 BIN FREE R VALUE : 0.3160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2569 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 425 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.97000 REMARK 3 B22 (A**2) : 0.04000 REMARK 3 B33 (A**2) : 0.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.83000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.080 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.069 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.040 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.230 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2849 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3895 ; 1.642 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 372 ; 4.854 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 163 ;38.989 ;24.540 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 507 ;14.520 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;17.832 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 415 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2271 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1502 ; 0.230 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1979 ; 0.321 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 308 ; 0.219 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 63 ; 0.211 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 34 ; 0.198 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1743 ; 1.694 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2744 ; 2.365 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1234 ; 3.564 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1120 ; 4.984 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2977 ; 2.137 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 431 ; 7.191 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 2762 ; 4.547 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2P0N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAR-07. REMARK 100 THE RCSB ID CODE IS RCSB041818. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97920 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62114 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.410 REMARK 200 RESOLUTION RANGE LOW (A) : 31.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.41 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 61.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.47500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.920 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, DM, SOLVE/RESOLVE, HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 MAGNESIUM CHLORIDE, 0.1 M BIS-TRIS REMARK 280 BUFFER, 25% PEG 3350, PH 5.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 51.78950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.77900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 51.78950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.77900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAIN(S). AUTHORS STATE THAT THE REMARK 300 BIOLOGICAL UNIT OF THIS PROTEIN IS UNKNOWN. REMARK 300 THE BIOLOGICAL UNIT ASSEMBLY SHOWN IN REMARK 350 IS REMARK 300 PREDICTED BY THE ANALYSIS OF PROTEIN INTERFACES BASED REMARK 300 ON THIS CRYSTAL STRUCTURE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 715 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 703 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 ASN A 2 REMARK 465 PRO A 3 REMARK 465 PHE A 4 REMARK 465 GLU A 5 REMARK 465 THR A 6 REMARK 465 LYS A 7 REMARK 465 SER A 8 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 ASN B 2 REMARK 465 PRO B 3 REMARK 465 PHE B 4 REMARK 465 GLU B 5 REMARK 465 THR B 6 REMARK 465 LYS B 7 REMARK 465 SER B 8 REMARK 465 VAL B 9 REMARK 465 THR B 10 REMARK 465 PHE B 11 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 669 O HOH B 809 2.05 REMARK 500 SG CYS B 21 S2 BME B 602 2.10 REMARK 500 CG2 ILE B 159 O HOH B 809 2.10 REMARK 500 O HOH B 636 O HOH B 783 2.12 REMARK 500 O HOH A 699 O HOH A 772 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL B 61 -54.30 -122.15 REMARK 500 ASN B 73 -52.77 -124.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 741 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A 780 DISTANCE = 5.30 ANGSTROMS REMARK 525 HOH A 781 DISTANCE = 5.36 ANGSTROMS REMARK 525 HOH A 824 DISTANCE = 5.35 ANGSTROMS REMARK 525 HOH B 747 DISTANCE = 6.28 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 604 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CL A 608 CL REMARK 620 2 HIS A 22 NE2 123.9 REMARK 620 3 HIS A 66 NE2 93.4 92.9 REMARK 620 4 GLU A 70 OE2 112.3 123.8 86.4 REMARK 620 5 GLU A 140 OE1 94.3 85.9 171.4 87.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 605 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 140 OE2 REMARK 620 2 GLU A 70 OE1 89.1 REMARK 620 3 HIS A 96 NE2 124.9 88.0 REMARK 620 4 CL A 608 CL 117.9 96.2 117.1 REMARK 620 5 HIS A 136 NE2 87.7 174.3 89.9 89.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 606 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 96 NE2 REMARK 620 2 HIS B 136 NE2 89.3 REMARK 620 3 GLU B 140 OE2 128.5 89.8 REMARK 620 4 CL B 609 CL 114.1 90.3 117.4 REMARK 620 5 GLU B 70 OE1 87.0 172.8 87.7 96.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 607 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 22 NE2 REMARK 620 2 GLU B 140 OE1 83.5 REMARK 620 3 CL B 609 CL 125.9 95.0 REMARK 620 4 HIS B 66 NE2 93.0 169.8 94.7 REMARK 620 5 GLU B 70 OE2 121.7 87.2 112.2 86.6 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 603 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC83866 RELATED DB: TARGETDB DBREF 2P0N A 1 169 UNP Q9JYL1 Q9JYL1_NEIMB 1 169 DBREF 2P0N B 1 169 UNP Q9JYL1 Q9JYL1_NEIMB 1 169 SEQADV 2P0N SER A -2 UNP Q9JYL1 CLONING ARTIFACT SEQADV 2P0N ASN A -1 UNP Q9JYL1 CLONING ARTIFACT SEQADV 2P0N ALA A 0 UNP Q9JYL1 CLONING ARTIFACT SEQADV 2P0N MSE A 1 UNP Q9JYL1 MET 1 MODIFIED RESIDUE SEQADV 2P0N MSE A 17 UNP Q9JYL1 MET 17 MODIFIED RESIDUE SEQADV 2P0N MSE A 34 UNP Q9JYL1 MET 34 MODIFIED RESIDUE SEQADV 2P0N MSE A 146 UNP Q9JYL1 MET 146 MODIFIED RESIDUE SEQADV 2P0N MSE A 163 UNP Q9JYL1 MET 163 MODIFIED RESIDUE SEQADV 2P0N SER B -2 UNP Q9JYL1 CLONING ARTIFACT SEQADV 2P0N ASN B -1 UNP Q9JYL1 CLONING ARTIFACT SEQADV 2P0N ALA B 0 UNP Q9JYL1 CLONING ARTIFACT SEQADV 2P0N MSE B 1 UNP Q9JYL1 MET 1 MODIFIED RESIDUE SEQADV 2P0N MSE B 17 UNP Q9JYL1 MET 17 MODIFIED RESIDUE SEQADV 2P0N MSE B 34 UNP Q9JYL1 MET 34 MODIFIED RESIDUE SEQADV 2P0N MSE B 146 UNP Q9JYL1 MET 146 MODIFIED RESIDUE SEQADV 2P0N MSE B 163 UNP Q9JYL1 MET 163 MODIFIED RESIDUE SEQRES 1 A 172 SER ASN ALA MSE ASN PRO PHE GLU THR LYS SER VAL THR SEQRES 2 A 172 PHE ALA GLU PRO ILE GLU MSE LEU TYR ALA CYS HIS GLY SEQRES 3 A 172 LYS VAL ARG ARG PHE CYS GLY GLN VAL ALA MSE LEU SER SEQRES 4 A 172 ASP TYR ILE ALA GLU ASN GLY CYS ASN GLN ILE VAL LEU SEQRES 5 A 172 GLN THR ILE ARG GLN ILE ALA GLN TYR PHE ASN VAL ALA SEQRES 6 A 172 ALA PRO LEU HIS HIS GLU ASP GLU GLU GLU ASN PHE PHE SEQRES 7 A 172 PRO LEU LEU LEU GLN TYR ALA PRO GLN ALA GLN GLU SER SEQRES 8 A 172 VAL ASP GLU LEU LEU ARG GLN HIS ILE GLY LEU HIS ASP SEQRES 9 A 172 ASN TRP ALA ALA VAL SER ALA GLU PHE ALA LYS LEU GLU SEQRES 10 A 172 ALA ASP ASN ALA TYR VAL PRO ASP GLU GLU ALA PHE LYS SEQRES 11 A 172 ARG PHE VAL ALA GLY TYR ASP VAL HIS LEU ALA ILE GLU SEQRES 12 A 172 GLU PRO LEU PHE ASP MSE GLY ASN THR PHE ILE PRO LYS SEQRES 13 A 172 GLU LYS LEU THR GLU ILE GLY GLU ILE MSE ALA ALA ARG SEQRES 14 A 172 ARG ARG LYS SEQRES 1 B 172 SER ASN ALA MSE ASN PRO PHE GLU THR LYS SER VAL THR SEQRES 2 B 172 PHE ALA GLU PRO ILE GLU MSE LEU TYR ALA CYS HIS GLY SEQRES 3 B 172 LYS VAL ARG ARG PHE CYS GLY GLN VAL ALA MSE LEU SER SEQRES 4 B 172 ASP TYR ILE ALA GLU ASN GLY CYS ASN GLN ILE VAL LEU SEQRES 5 B 172 GLN THR ILE ARG GLN ILE ALA GLN TYR PHE ASN VAL ALA SEQRES 6 B 172 ALA PRO LEU HIS HIS GLU ASP GLU GLU GLU ASN PHE PHE SEQRES 7 B 172 PRO LEU LEU LEU GLN TYR ALA PRO GLN ALA GLN GLU SER SEQRES 8 B 172 VAL ASP GLU LEU LEU ARG GLN HIS ILE GLY LEU HIS ASP SEQRES 9 B 172 ASN TRP ALA ALA VAL SER ALA GLU PHE ALA LYS LEU GLU SEQRES 10 B 172 ALA ASP ASN ALA TYR VAL PRO ASP GLU GLU ALA PHE LYS SEQRES 11 B 172 ARG PHE VAL ALA GLY TYR ASP VAL HIS LEU ALA ILE GLU SEQRES 12 B 172 GLU PRO LEU PHE ASP MSE GLY ASN THR PHE ILE PRO LYS SEQRES 13 B 172 GLU LYS LEU THR GLU ILE GLY GLU ILE MSE ALA ALA ARG SEQRES 14 B 172 ARG ARG LYS MODRES 2P0N MSE A 17 MET SELENOMETHIONINE MODRES 2P0N MSE A 34 MET SELENOMETHIONINE MODRES 2P0N MSE A 146 MET SELENOMETHIONINE MODRES 2P0N MSE A 163 MET SELENOMETHIONINE MODRES 2P0N MSE B 17 MET SELENOMETHIONINE MODRES 2P0N MSE B 34 MET SELENOMETHIONINE MODRES 2P0N MSE B 146 MET SELENOMETHIONINE MODRES 2P0N MSE B 163 MET SELENOMETHIONINE HET MSE A 17 13 HET MSE A 34 13 HET MSE A 146 13 HET MSE A 163 8 HET MSE B 17 13 HET MSE B 34 13 HET MSE B 146 8 HET MSE B 163 8 HET MN A 604 1 HET MN A 605 1 HET MN B 606 1 HET MN B 607 1 HET CL A 608 1 HET CL B 609 1 HET BME A 601 4 HET BME B 602 4 HET GOL B 603 6 HETNAM MSE SELENOMETHIONINE HETNAM MN MANGANESE (II) ION HETNAM CL CHLORIDE ION HETNAM BME BETA-MERCAPTOETHANOL HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 MN 4(MN 2+) FORMUL 7 CL 2(CL 1-) FORMUL 9 BME 2(C2 H6 O S) FORMUL 11 GOL C3 H8 O3 FORMUL 12 HOH *425(H2 O) HELIX 1 1 GLU A 13 GLY A 43 1 31 HELIX 2 2 ASN A 45 ASN A 73 1 29 HELIX 3 3 ASN A 73 ALA A 82 1 10 HELIX 4 4 ALA A 85 ASP A 116 1 32 HELIX 5 5 ASP A 122 ILE A 151 1 30 HELIX 6 6 PRO A 152 ARG A 167 1 16 HELIX 7 7 GLU B 13 GLY B 43 1 31 HELIX 8 8 ASN B 45 VAL B 61 1 17 HELIX 9 9 VAL B 61 ASN B 73 1 13 HELIX 10 10 ASN B 73 ALA B 82 1 10 HELIX 11 11 ALA B 85 ASP B 116 1 32 HELIX 12 12 ASP B 122 ILE B 151 1 30 HELIX 13 13 PRO B 152 ARG B 167 1 16 LINK C GLU A 16 N MSE A 17 1555 1555 1.33 LINK C MSE A 17 N LEU A 18 1555 1555 1.32 LINK C ALA A 33 N MSE A 34 1555 1555 1.35 LINK C MSE A 34 N LEU A 35 1555 1555 1.33 LINK C ASP A 145 N MSE A 146 1555 1555 1.34 LINK C MSE A 146 N GLY A 147 1555 1555 1.34 LINK C ILE A 162 N MSE A 163 1555 1555 1.33 LINK C MSE A 163 N ALA A 164 1555 1555 1.33 LINK MN MN A 604 CL CL A 608 1555 1555 2.40 LINK MN MN A 604 NE2 HIS A 22 1555 1555 2.17 LINK MN MN A 604 NE2 HIS A 66 1555 1555 2.23 LINK MN MN A 604 OE2 GLU A 70 1555 1555 2.04 LINK MN MN A 604 OE1 GLU A 140 1555 1555 2.17 LINK MN MN A 605 OE2 GLU A 140 1555 1555 2.13 LINK MN MN A 605 OE1 GLU A 70 1555 1555 2.17 LINK MN MN A 605 NE2 HIS A 96 1555 1555 2.17 LINK MN MN A 605 CL CL A 608 1555 1555 2.51 LINK MN MN A 605 NE2 HIS A 136 1555 1555 2.24 LINK C GLU B 16 N MSE B 17 1555 1555 1.34 LINK C MSE B 17 N LEU B 18 1555 1555 1.32 LINK C ALA B 33 N MSE B 34 1555 1555 1.34 LINK C MSE B 34 N LEU B 35 1555 1555 1.33 LINK C ASP B 145 N MSE B 146 1555 1555 1.34 LINK C MSE B 146 N GLY B 147 1555 1555 1.33 LINK C ILE B 162 N MSE B 163 1555 1555 1.34 LINK C MSE B 163 N ALA B 164 1555 1555 1.33 LINK MN MN B 606 NE2 HIS B 96 1555 1555 2.19 LINK MN MN B 606 NE2 HIS B 136 1555 1555 2.27 LINK MN MN B 606 OE2 GLU B 140 1555 1555 2.09 LINK MN MN B 606 CL CL B 609 1555 1555 2.51 LINK MN MN B 606 OE1 GLU B 70 1555 1555 2.20 LINK MN MN B 607 NE2 HIS B 22 1555 1555 2.17 LINK MN MN B 607 OE1 GLU B 140 1555 1555 2.12 LINK MN MN B 607 CL CL B 609 1555 1555 2.40 LINK MN MN B 607 NE2 HIS B 66 1555 1555 2.23 LINK MN MN B 607 OE2 GLU B 70 1555 1555 2.07 SITE 1 AC1 6 HIS A 22 HIS A 66 GLU A 70 GLU A 140 SITE 2 AC1 6 MN A 605 CL A 608 SITE 1 AC2 6 GLU A 70 HIS A 96 HIS A 136 GLU A 140 SITE 2 AC2 6 MN A 604 CL A 608 SITE 1 AC3 6 GLU B 70 HIS B 96 HIS B 136 GLU B 140 SITE 2 AC3 6 MN B 607 CL B 609 SITE 1 AC4 6 HIS B 22 HIS B 66 GLU B 70 GLU B 140 SITE 2 AC4 6 MN B 606 CL B 609 SITE 1 AC5 7 HIS A 66 HIS A 67 GLU A 70 HIS A 136 SITE 2 AC5 7 GLU A 140 MN A 604 MN A 605 SITE 1 AC6 7 HIS B 66 HIS B 67 GLU B 70 HIS B 136 SITE 2 AC6 7 GLU B 140 MN B 606 MN B 607 SITE 1 AC7 5 CYS A 21 TYR A 58 ALA A 62 ARG A 167 SITE 2 AC7 5 HOH A 664 SITE 1 AC8 4 CYS B 21 LYS B 24 TYR B 58 HOH B 787 SITE 1 AC9 7 ILE A 139 HOH A 628 ALA B 131 ASP B 134 SITE 2 AC9 7 THR B 149 HOH B 664 HOH B 695 CRYST1 103.579 59.558 59.706 90.00 110.32 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009654 0.000000 0.003575 0.00000 SCALE2 0.000000 0.016790 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017860 0.00000