HEADER TRANSCRIPTION 18-NOV-12 2M16 TITLE P75/LEDGF PWWP DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PC4 AND SFRS1-INTERACTING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-93; COMPND 5 SYNONYM: CLL-ASSOCIATED ANTIGEN KW-7, DENSE FINE SPECKLES 70 KDA COMPND 6 PROTEIN, DFS 70, LENS EPITHELIUM-DERIVED GROWTH FACTOR, COMPND 7 TRANSCRIPTIONAL COACTIVATOR P75/P52; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DFS70, LEDGF, PSIP1, PSIP2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PFT-1-LEDGF KEYWDS PROTEIN, PWWP DOMAIN, TRANSCRIPTION, DNA BINDING EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR B.L.CROWE,M.P.FOSTER REVDAT 3 14-JUN-23 2M16 1 REMARK SEQADV REVDAT 2 17-APR-13 2M16 1 JRNL REVDAT 1 27-FEB-13 2M16 0 JRNL AUTH J.O.EIDAHL,B.L.CROWE,J.A.NORTH,C.J.MCKEE,N.SHKRIABAI,L.FENG, JRNL AUTH 2 M.PLUMB,R.L.GRAHAM,R.J.GORELICK,S.HESS,M.G.POIRIER, JRNL AUTH 3 M.P.FOSTER,M.KVARATSKHELIA JRNL TITL STRUCTURAL BASIS FOR HIGH-AFFINITY BINDING OF LEDGF PWWP TO JRNL TITL 2 MONONUCLEOSOMES. JRNL REF NUCLEIC ACIDS RES. V. 41 3924 2013 JRNL REFN ISSN 0305-1048 JRNL PMID 23396443 JRNL DOI 10.1093/NAR/GKT074 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2M16 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000103078. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : 0.35 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.35-0.45 MM [U-99% 13C; U-99% REMARK 210 15N] ENTITY, 50 MM HEPES, 150 MM REMARK 210 SODIUM CHLORIDE, 2 MM BETA- REMARK 210 MERCAPTOETHANOL, 0.66 MM DSS, 95% REMARK 210 H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 3D HNCO; 3D CBCA(CO) REMARK 210 NH; 3D HNCACB; 3D HBHA(CO)NH; 3D REMARK 210 (H)CC(CO)NH-TOCSY; 3D HCCH-TOCSY; REMARK 210 3D 1H-15N NOESY; 3D 1H-13C REMARK 210 NOESY ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TALOS+, NMRPIPE, NMRVIEWJ 9.0.0 REMARK 210 -B44, XWINNMR, PINE, PSVS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 150 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 34 74.35 63.33 REMARK 500 1 ASN A 38 27.42 -144.47 REMARK 500 1 ASN A 86 -68.36 -132.28 REMARK 500 1 ASN A 87 72.91 -113.44 REMARK 500 2 LYS A 34 74.31 51.64 REMARK 500 2 ASN A 87 76.16 -112.00 REMARK 500 3 LYS A 16 109.55 -52.61 REMARK 500 3 LYS A 34 72.35 63.76 REMARK 500 3 ASN A 86 -68.59 -132.84 REMARK 500 3 ASN A 87 72.48 -113.76 REMARK 500 4 VAL A 33 38.29 -96.75 REMARK 500 4 LYS A 34 73.72 53.96 REMARK 500 4 ASN A 87 76.57 -112.38 REMARK 500 5 VAL A 33 38.47 -95.87 REMARK 500 5 ASN A 86 -68.81 -138.91 REMARK 500 5 ASN A 87 73.92 -112.60 REMARK 500 6 VAL A 33 33.51 -94.65 REMARK 500 6 ASN A 38 28.95 -157.65 REMARK 500 6 GLU A 79 46.01 -108.12 REMARK 500 6 ASN A 86 -68.57 -143.60 REMARK 500 6 ASN A 87 74.94 -111.96 REMARK 500 6 PHE A 92 103.37 -52.23 REMARK 500 7 LYS A 34 68.37 63.69 REMARK 500 7 ASN A 86 -68.60 -126.62 REMARK 500 7 ASN A 87 77.22 -111.96 REMARK 500 8 VAL A 33 38.08 -94.76 REMARK 500 8 LYS A 34 71.58 51.38 REMARK 500 8 ASN A 38 26.68 -159.05 REMARK 500 8 ASN A 86 -68.25 -130.39 REMARK 500 8 ASN A 87 75.21 -112.58 REMARK 500 9 LYS A 34 74.75 54.35 REMARK 500 9 ASN A 38 23.95 -151.74 REMARK 500 9 ASN A 87 75.46 -112.08 REMARK 500 10 LYS A 34 74.55 53.00 REMARK 500 10 ASN A 38 26.89 -155.09 REMARK 500 10 GLU A 79 53.13 -111.17 REMARK 500 10 ASN A 86 -68.70 -134.88 REMARK 500 10 ASN A 87 75.26 -112.35 REMARK 500 11 LYS A 34 74.87 63.42 REMARK 500 11 ASN A 38 26.81 -151.91 REMARK 500 11 ASN A 86 -67.62 -130.22 REMARK 500 11 ASN A 87 77.34 -110.82 REMARK 500 11 PHE A 92 82.26 53.19 REMARK 500 12 LYS A 34 67.90 37.48 REMARK 500 12 THR A 37 -72.02 -71.05 REMARK 500 12 ASN A 86 -69.27 -137.56 REMARK 500 12 ASN A 87 73.32 -113.13 REMARK 500 13 LYS A 34 73.67 51.80 REMARK 500 13 ASN A 72 -60.60 -97.76 REMARK 500 13 ASN A 86 -66.22 -131.63 REMARK 500 REMARK 500 THIS ENTRY HAS 85 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18478 RELATED DB: BMRB REMARK 900 RELATED ID: 2M15 RELATED DB: PDB DBREF 2M16 A 1 93 UNP O75475 PSIP1_HUMAN 1 93 SEQADV 2M16 GLY A -3 UNP O75475 EXPRESSION TAG SEQADV 2M16 PRO A -2 UNP O75475 EXPRESSION TAG SEQADV 2M16 GLY A -1 UNP O75475 EXPRESSION TAG SEQADV 2M16 SER A 0 UNP O75475 EXPRESSION TAG SEQRES 1 A 97 GLY PRO GLY SER MET THR ARG ASP PHE LYS PRO GLY ASP SEQRES 2 A 97 LEU ILE PHE ALA LYS MET LYS GLY TYR PRO HIS TRP PRO SEQRES 3 A 97 ALA ARG VAL ASP GLU VAL PRO ASP GLY ALA VAL LYS PRO SEQRES 4 A 97 PRO THR ASN LYS LEU PRO ILE PHE PHE PHE GLY THR HIS SEQRES 5 A 97 GLU THR ALA PHE LEU GLY PRO LYS ASP ILE PHE PRO TYR SEQRES 6 A 97 SER GLU ASN LYS GLU LYS TYR GLY LYS PRO ASN LYS ARG SEQRES 7 A 97 LYS GLY PHE ASN GLU GLY LEU TRP GLU ILE ASP ASN ASN SEQRES 8 A 97 PRO LYS VAL LYS PHE SER HELIX 1 1 TYR A 61 LYS A 65 1 5 SHEET 1 A 5 GLU A 49 LEU A 53 0 SHEET 2 A 5 LEU A 40 PHE A 44 -1 N PHE A 44 O GLU A 49 SHEET 3 A 5 HIS A 20 VAL A 25 -1 N ARG A 24 O PHE A 43 SHEET 4 A 5 LEU A 10 LYS A 14 -1 N ALA A 13 O TRP A 21 SHEET 5 A 5 PHE A 59 PRO A 60 -1 O PHE A 59 N PHE A 12 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 MODEL 2 MODEL 3 MODEL 4 MODEL 5 MODEL 6 MODEL 7 MODEL 8 MODEL 9 MODEL 10 MODEL 11 MODEL 12 MODEL 13 MODEL 14 MODEL 15 MODEL 16 MODEL 17 MODEL 18 MODEL 19 MODEL 20