HEADER RNA BINDING PROTEIN 16-MAR-06 2DGX TITLE SOLUTION STRUCTURE OF THE RNA RECOGNITION MOTIF IN KIAA0430 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: KIAA0430 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RNA RECOGNITION MOTIF; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KIAA0430; SOURCE 6 EXPRESSION_SYSTEM: CELL FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P050822-19; SOURCE 9 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS KEYWDS RRM DOMAIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 2 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 3 GENOMICS/PROTEOMICS INITIATIVE, RSGI, RNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.ABE,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 3 09-MAR-22 2DGX 1 REMARK SEQADV REVDAT 2 24-FEB-09 2DGX 1 VERSN REVDAT 1 16-SEP-06 2DGX 0 JRNL AUTH C.ABE,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE RNA RECOGNITION MOTIF IN KIAA0430 JRNL TITL 2 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CYANA 2.0 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT, P. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2DGX COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-MAR-06. REMARK 100 THE DEPOSITION ID IS D_1000025405. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20MM D-TRIS-HCL(PH7.0), 100MM REMARK 210 NACL, 1MM D-DTT, 0.02% NAN3, 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.932, CYANA 2.0 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES WITH REMARK 210 THE LOWEST ENERGY, STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 550 158.61 -48.12 REMARK 500 1 ASP A 563 96.49 -57.59 REMARK 500 1 LEU A 571 -61.85 -90.08 REMARK 500 1 GLN A 597 37.83 -86.81 REMARK 500 1 LYS A 621 87.37 -54.20 REMARK 500 2 ASP A 563 101.75 -58.42 REMARK 500 2 TYR A 596 -26.03 -39.55 REMARK 500 2 GLN A 597 37.41 -83.35 REMARK 500 2 LYS A 621 89.83 -53.21 REMARK 500 2 SER A 636 41.92 -94.37 REMARK 500 3 ASP A 563 94.91 -55.51 REMARK 500 3 HIS A 582 -62.88 -94.62 REMARK 500 3 GLN A 597 31.03 -88.66 REMARK 500 3 LYS A 621 88.96 -53.95 REMARK 500 4 ASP A 563 87.87 -49.77 REMARK 500 4 HIS A 582 -64.18 -91.95 REMARK 500 4 TYR A 596 -29.20 -39.94 REMARK 500 4 GLN A 597 37.36 -83.75 REMARK 500 4 HIS A 618 121.98 -38.44 REMARK 500 4 LYS A 621 94.29 -54.62 REMARK 500 5 SER A 550 41.09 35.99 REMARK 500 5 ASP A 563 88.37 -54.06 REMARK 500 5 HIS A 582 -66.80 -94.05 REMARK 500 5 THR A 594 36.33 -93.97 REMARK 500 5 TYR A 596 -29.34 -38.48 REMARK 500 5 GLN A 597 35.40 -83.76 REMARK 500 5 LYS A 621 91.04 -47.29 REMARK 500 5 SER A 640 -60.70 -94.07 REMARK 500 6 SER A 551 -58.54 -130.21 REMARK 500 6 ASN A 553 104.60 -44.92 REMARK 500 6 ASP A 563 101.40 -48.04 REMARK 500 6 LEU A 566 165.77 -45.59 REMARK 500 6 LYS A 621 88.33 -52.76 REMARK 500 6 THR A 633 97.37 -58.94 REMARK 500 6 SER A 636 42.37 -106.41 REMARK 500 6 PRO A 638 89.15 -69.77 REMARK 500 7 GLN A 597 38.71 -82.68 REMARK 500 7 LYS A 621 88.92 -53.13 REMARK 500 7 THR A 633 174.91 -55.49 REMARK 500 7 ALA A 635 142.25 -174.02 REMARK 500 8 SER A 548 95.78 -52.42 REMARK 500 8 SER A 551 -60.31 -105.56 REMARK 500 8 ASP A 563 85.70 -61.87 REMARK 500 8 HIS A 582 -70.33 -87.58 REMARK 500 8 TYR A 596 -28.76 -39.74 REMARK 500 8 GLN A 597 38.36 -82.77 REMARK 500 8 HIS A 618 122.03 -36.73 REMARK 500 8 LYS A 621 90.79 -56.47 REMARK 500 9 SER A 548 130.73 -173.02 REMARK 500 9 ASP A 563 92.49 -62.77 REMARK 500 REMARK 500 THIS ENTRY HAS 110 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002100419.1 RELATED DB: TARGETDB DBREF 2DGX A 553 635 UNP Q9Y4J9 Q9Y4J9_HUMAN 227 309 SEQADV 2DGX GLY A 546 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX SER A 547 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX SER A 548 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX GLY A 549 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX SER A 550 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX SER A 551 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX GLY A 552 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX SER A 636 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX GLY A 637 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX PRO A 638 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX SER A 639 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX SER A 640 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX GLY A 641 UNP Q9Y4J9 CLONING ARTIFACT SEQRES 1 A 96 GLY SER SER GLY SER SER GLY ASN GLY ALA ASP VAL GLN SEQRES 2 A 96 VAL SER ASN ILE ASP TYR ARG LEU SER ARG LYS GLU LEU SEQRES 3 A 96 GLN GLN LEU LEU GLN GLU ALA PHE ALA ARG HIS GLY LYS SEQRES 4 A 96 VAL LYS SER VAL GLU LEU SER PRO HIS THR ASP TYR GLN SEQRES 5 A 96 LEU LYS ALA VAL VAL GLN MET GLU ASN LEU GLN ASP ALA SEQRES 6 A 96 ILE GLY ALA VAL ASN SER LEU HIS ARG TYR LYS ILE GLY SEQRES 7 A 96 SER LYS LYS ILE LEU VAL SER LEU ALA THR GLY ALA SER SEQRES 8 A 96 GLY PRO SER SER GLY HELIX 1 1 SER A 567 GLY A 583 1 17 HELIX 2 2 ASN A 606 HIS A 618 1 13 SHEET 1 A 5 VAL A 585 LEU A 590 0 SHEET 2 A 5 ALA A 600 MET A 604 -1 O GLN A 603 N LYS A 586 SHEET 3 A 5 ALA A 555 SER A 560 -1 N VAL A 559 O ALA A 600 SHEET 4 A 5 LYS A 625 LEU A 631 -1 O LEU A 628 N SER A 560 SHEET 5 A 5 TYR A 620 ILE A 622 -1 N ILE A 622 O LYS A 625 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 MODEL 2 MODEL 3 MODEL 4 MODEL 5 MODEL 6 MODEL 7 MODEL 8 MODEL 9 MODEL 10 MODEL 11 MODEL 12 MODEL 13 MODEL 14 MODEL 15 MODEL 16 MODEL 17 MODEL 18 MODEL 19 MODEL 20