HEADER HYDROLASE 22-MAR-04 1V04 TITLE SERUM PARAOXONASE BY DIRECTED EVOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERUM PARAOXONASE/ARYLESTERASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: A-ESTERASE 1, SERUM ARYLDIALKYLPHOSPHATASE 1, PON1, AROMATIC COMPND 5 ESTERASE 1; COMPND 6 EC: 3.1.1.2, 3.1.8.1; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: PARAOXONASE-1 (PON1) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, ORYCTOLAGUS CUNICULUS, MUS SOURCE 3 MUSCULUS, RATTUS RATTUS; SOURCE 4 ORGANISM_TAXID: 9606, 9986, 10090, 10117; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ORIGAMI B (DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET 32B(+); SOURCE 9 OTHER_DETAILS: FROM SHUFFLED GENES OF HUMAN, RABBIT, MOUSE AND RAT SOURCE 10 PARAOXONASE KEYWDS PARAOXONASE, HYDROLASE, DIRECTED EVOLUTION, ANTIOXIDANT, ISRAEL KEYWDS 2 STRUCTURAL PROTEOMICS CENTER, ISPC, STRUCTURAL GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR M.HAREL,A.AHARONI,L.GAIDUKOV,B.BRUMSHTEIN,O.KHERSONSKY,S.YAGUR, AUTHOR 2 R.MEGED,H.DVIR,R.B.G.RAVELLI,A.MCCARTHY,L.TOKER,I.SILMAN, AUTHOR 3 J.L.SUSSMAN,D.S.TAWFIK REVDAT 4 22-MAR-17 1V04 1 SOURCE REVDAT 3 15-MAR-17 1V04 1 SOURCE REVDAT 2 24-FEB-09 1V04 1 VERSN REVDAT 1 23-APR-04 1V04 0 JRNL AUTH M.HAREL,A.AHARONI,L.GAIDUKOV,B.BRUMSHTEIN,O.KHERSONSKY, JRNL AUTH 2 R.MEGED,H.DVIR,R.B.G.RAVELLI,A.MCCARTHY,L.TOKER,I.SILMAN, JRNL AUTH 3 J.L.SUSSMAN,D.S.TAWFIK JRNL TITL STRUCTURE AND EVOLUTION OF THE SERUM PARAOXONASE FAMILY OF JRNL TITL 2 DETOXIFYING AND ANTI-ATHEROSCLEROTIC ENZYMES JRNL REF NAT.STRUCT.MOL.BIOL. V. 11 412 2004 JRNL REFN ISSN 1545-9993 JRNL PMID 15098021 JRNL DOI 10.1038/NSMB767 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 33505 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1767 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 REFLECTION IN BIN (WORKING SET) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2634 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 115 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.56000 REMARK 3 B22 (A**2) : -0.56000 REMARK 3 B33 (A**2) : 1.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.145 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.139 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.106 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.256 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE FOLLOWING RESIDUES WERE NOT SEEN IN REMARK 3 THE ELECTRON DENSITY: A1-A15, A72-A79 REMARK 4 REMARK 4 1V04 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-MAR-04. REMARK 100 THE PDBE ID CODE IS EBI-14841. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-03 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 4.60 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796, 0.9794 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33505 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.66000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2M AMMONIUM DIHYDROGEN REMARK 280 PHOSPHATE, PH 4.60 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.58500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 49.22000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 49.22000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 104.37750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 49.22000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 49.22000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 34.79250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 49.22000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.22000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 104.37750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 49.22000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.22000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 34.79250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 69.58500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 3 REMARK 465 LEU A 4 REMARK 465 THR A 5 REMARK 465 ALA A 6 REMARK 465 LEU A 7 REMARK 465 THR A 8 REMARK 465 LEU A 9 REMARK 465 LEU A 10 REMARK 465 GLY A 11 REMARK 465 MET A 12 REMARK 465 GLY A 13 REMARK 465 LEU A 14 REMARK 465 ALA A 15 REMARK 465 PRO A 72 REMARK 465 GLY A 73 REMARK 465 ILE A 74 REMARK 465 MET A 75 REMARK 465 SER A 76 REMARK 465 PHE A 77 REMARK 465 ASP A 78 REMARK 465 PRO A 79 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 18 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 54 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 188 CB - CG - OD2 ANGL. DEV. = 8.0 DEGREES REMARK 500 ASP A 274 CB - CG - OD2 ANGL. DEV. = 7.1 DEGREES REMARK 500 ARG A 290 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ASP A 295 CB - CG - OD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 ASP A 309 CB - CG - OD2 ANGL. DEV. = 7.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 18 13.49 -62.74 REMARK 500 SER A 52 50.95 -159.27 REMARK 500 HIS A 115 -117.58 -133.00 REMARK 500 ASN A 125 -0.65 81.66 REMARK 500 SER A 166 72.32 -151.11 REMARK 500 GLU A 176 36.61 -145.15 REMARK 500 PHE A 222 62.90 70.81 REMARK 500 ASN A 224 -101.41 -143.70 REMARK 500 ASP A 269 -104.14 -106.00 REMARK 500 PHE A 293 75.51 -112.09 REMARK 500 HIS A 348 -104.44 -125.08 REMARK 500 LYS A 349 -168.50 -103.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1356 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2053 O REMARK 620 2 ASP A 54 OD2 172.1 REMARK 620 3 ILE A 117 O 98.5 87.0 REMARK 620 4 ASP A 169 OD1 72.1 102.8 86.3 REMARK 620 5 ASP A 169 OD2 84.3 87.8 130.8 47.6 REMARK 620 6 HOH A2010 O 100.9 77.7 142.5 130.2 83.1 REMARK 620 7 HOH A2011 O 93.4 93.5 74.7 154.3 154.5 72.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1357 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2009 O REMARK 620 2 ASN A 224 OD1 131.0 REMARK 620 3 ASP A 269 OD2 149.7 73.6 REMARK 620 4 ASN A 270 OD1 86.8 87.7 75.8 REMARK 620 5 GLU A 53 OE2 75.0 153.2 84.5 101.8 REMARK 620 6 PO4 A1358 O1 102.7 94.9 90.3 164.5 69.5 REMARK 620 7 ASN A 168 OD1 68.9 69.6 140.9 114.7 125.9 80.4 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A1356 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A1357 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A1358 DBREF 1V04 A 1 355 GB 40850540 AAR95984 1 355 SEQRES 1 A 355 MET ALA LYS LEU THR ALA LEU THR LEU LEU GLY MET GLY SEQRES 2 A 355 LEU ALA LEU PHE ASP ARG GLN LYS SER SER PHE GLN THR SEQRES 3 A 355 ARG PHE ASN VAL HIS ARG GLU VAL THR PRO VAL GLU LEU SEQRES 4 A 355 PRO ASN CYS ASN LEU VAL LYS GLY ILE ASP ASN GLY SER SEQRES 5 A 355 GLU ASP LEU GLU ILE LEU PRO ASN GLY LEU ALA PHE ILE SEQRES 6 A 355 SER SER GLY LEU LYS TYR PRO GLY ILE MET SER PHE ASP SEQRES 7 A 355 PRO ASP LYS SER GLY LYS ILE LEU LEU MET ASP LEU ASN SEQRES 8 A 355 GLU LYS GLU PRO ALA VAL SER GLU LEU GLU ILE ILE GLY SEQRES 9 A 355 ASN THR LEU ASP ILE SER SER PHE ASN PRO HIS GLY ILE SEQRES 10 A 355 SER THR PHE ILE ASP ASP ASP ASN THR VAL TYR LEU LEU SEQRES 11 A 355 VAL VAL ASN HIS PRO GLY SER SER SER THR VAL GLU VAL SEQRES 12 A 355 PHE LYS PHE GLN GLU GLU GLU LYS SER LEU LEU HIS LEU SEQRES 13 A 355 LYS THR ILE ARG HIS LYS LEU LEU PRO SER VAL ASN ASP SEQRES 14 A 355 ILE VAL ALA VAL GLY PRO GLU HIS PHE TYR ALA THR ASN SEQRES 15 A 355 ASP HIS TYR PHE ILE ASP PRO TYR LEU LYS SER TRP GLU SEQRES 16 A 355 MET HIS LEU GLY LEU ALA TRP SER PHE VAL THR TYR TYR SEQRES 17 A 355 SER PRO ASN ASP VAL ARG VAL VAL ALA GLU GLY PHE ASP SEQRES 18 A 355 PHE ALA ASN GLY ILE ASN ILE SER PRO ASP GLY LYS TYR SEQRES 19 A 355 VAL TYR ILE ALA GLU LEU LEU ALA HIS LYS ILE HIS VAL SEQRES 20 A 355 TYR GLU LYS HIS ALA ASN TRP THR LEU THR PRO LEU ARG SEQRES 21 A 355 VAL LEU SER PHE ASP THR LEU VAL ASP ASN ILE SER VAL SEQRES 22 A 355 ASP PRO VAL THR GLY ASP LEU TRP VAL GLY CYS HIS PRO SEQRES 23 A 355 ASN GLY MET ARG ILE PHE PHE TYR ASP ALA GLU ASN PRO SEQRES 24 A 355 PRO GLY SER GLU VAL LEU ARG ILE GLN ASP ILE LEU SER SEQRES 25 A 355 GLU GLU PRO LYS VAL THR VAL VAL TYR ALA GLU ASN GLY SEQRES 26 A 355 THR VAL LEU GLN GLY SER THR VAL ALA ALA VAL TYR LYS SEQRES 27 A 355 GLY LYS LEU LEU ILE GLY THR VAL PHE HIS LYS ALA LEU SEQRES 28 A 355 TYR CYS ASP LEU HET CA A1356 1 HET CA A1357 1 HET PO4 A1358 5 HETNAM CA CALCIUM ION HETNAM PO4 PHOSPHATE ION FORMUL 2 CA 2(CA 2+) FORMUL 4 PO4 O4 P 3- FORMUL 5 HOH *115(H2 O) HELIX 1 1 ASP A 18 PHE A 28 1 11 HELIX 2 2 ASP A 108 PHE A 112 5 5 HELIX 3 3 ASP A 188 LEU A 198 1 11 HELIX 4 4 ASN A 287 PHE A 293 1 7 SHEET 1 AA 4 ASN A 43 LEU A 44 0 SHEET 2 AA 4 ALA A 350 ASP A 354 -1 O TYR A 352 N ASN A 43 SHEET 3 AA 4 LYS A 340 THR A 345 -1 O LEU A 341 N CYS A 353 SHEET 4 AA 4 SER A 331 TYR A 337 -1 N THR A 332 O GLY A 344 SHEET 1 AB 4 ASP A 54 ILE A 57 0 SHEET 2 AB 4 LEU A 62 SER A 67 -1 O PHE A 64 N GLU A 56 SHEET 3 AB 4 LYS A 84 ASP A 89 -1 O LYS A 84 N SER A 67 SHEET 4 AB 4 VAL A 97 GLU A 99 -1 O SER A 98 N LEU A 87 SHEET 1 AC 5 GLU A 101 ILE A 103 0 SHEET 2 AC 5 SER A 152 ILE A 159 1 O LEU A 153 N ILE A 103 SHEET 3 AC 5 THR A 140 GLN A 147 -1 O VAL A 141 N ILE A 159 SHEET 4 AC 5 VAL A 127 ASN A 133 -1 O VAL A 127 N PHE A 146 SHEET 5 AC 5 PRO A 114 ILE A 121 -1 N HIS A 115 O VAL A 132 SHEET 1 AD 4 VAL A 167 GLY A 174 0 SHEET 2 AD 4 HIS A 177 ASN A 182 -1 O HIS A 177 N VAL A 173 SHEET 3 AD 4 SER A 203 TYR A 208 -1 O PHE A 204 N ASN A 182 SHEET 4 AD 4 VAL A 213 PHE A 220 -1 O ARG A 214 N TYR A 207 SHEET 1 AE 4 ALA A 223 ILE A 228 0 SHEET 2 AE 4 TYR A 234 GLU A 239 -1 O TYR A 236 N ASN A 227 SHEET 3 AE 4 LYS A 244 LYS A 250 -1 O LYS A 244 N GLU A 239 SHEET 4 AE 4 LEU A 256 SER A 263 -1 O THR A 257 N GLU A 249 SHEET 1 AF 4 LEU A 267 VAL A 273 0 SHEET 2 AF 4 LEU A 280 HIS A 285 -1 O TRP A 281 N SER A 272 SHEET 3 AF 4 SER A 302 GLN A 308 -1 O GLU A 303 N CYS A 284 SHEET 4 AF 4 LYS A 316 GLU A 323 -1 O LYS A 316 N GLN A 308 SSBOND 1 CYS A 42 CYS A 353 1555 1555 2.79 LINK CA CA A1356 O HOH A2053 1555 1555 2.39 LINK CA CA A1356 OD2 ASP A 54 1555 1555 2.24 LINK CA CA A1356 O ILE A 117 1555 1555 2.43 LINK CA CA A1356 OD1 ASP A 169 1555 1555 2.87 LINK CA CA A1356 OD2 ASP A 169 1555 1555 2.52 LINK CA CA A1356 O HOH A2010 1555 1555 2.37 LINK CA CA A1356 O HOH A2011 1555 1555 2.35 LINK CA CA A1357 O HOH A2009 1555 1555 2.50 LINK CA CA A1357 OD1 ASN A 224 1555 1555 2.28 LINK CA CA A1357 OD2 ASP A 269 1555 1555 2.46 LINK CA CA A1357 OD1 ASN A 270 1555 1555 2.26 LINK CA CA A1357 OE2 GLU A 53 1555 1555 2.45 LINK CA CA A1357 O1 PO4 A1358 1555 1555 2.24 LINK CA CA A1357 OD1 ASN A 168 1555 1555 2.56 SITE 1 AC1 6 ASP A 54 ILE A 117 ASP A 169 HOH A2010 SITE 2 AC1 6 HOH A2011 HOH A2053 SITE 1 AC2 7 GLU A 53 ASN A 168 ASN A 224 ASP A 269 SITE 2 AC2 7 ASN A 270 PO4 A1358 HOH A2009 SITE 1 AC3 8 GLU A 53 HIS A 115 ASN A 168 ASN A 224 SITE 2 AC3 8 ASP A 269 THR A 332 VAL A 346 CA A1357 CRYST1 98.440 98.440 139.170 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010158 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010158 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007185 0.00000