HEADER CALCIUM-BINDING 25-JUN-98 1BJF TITLE CRYSTAL STRUCTURE OF RECOMBINANT BOVINE NEUROCALCIN DELTA TITLE 2 AT 2.4 ANGSTROMS COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEUROCALCIN DELTA; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 STRAIN: DH5-ALPHA; SOURCE 6 CELLULAR_LOCATION: CYTOPLASM; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMAL-C KEYWDS CALCIUM-BINDING, MYRISTOYLATION, NEURONAL SPECIFIC KEYWDS 2 GUANYLATE CYCLASE ACTIVATOR EXPDTA X-RAY DIFFRACTION AUTHOR S.VIJAY-KUMAR,V.D.KUMAR REVDAT 3 24-FEB-09 1BJF 1 VERSN REVDAT 2 30-SEP-03 1BJF 1 DBREF REVDAT 1 22-JUL-99 1BJF 0 JRNL AUTH S.VIJAY-KUMAR,V.D.KUMAR JRNL TITL CRYSTAL STRUCTURE OF RECOMBINANT BOVINE JRNL TITL 2 NEUROCALCIN. JRNL REF NAT.STRUCT.BIOL. V. 6 80 1999 JRNL REFN ISSN 1072-8368 JRNL PMID 9886296 JRNL DOI 10.1038/4956 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.84 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 84.3 REMARK 3 NUMBER OF REFLECTIONS : 12990 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.308 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1345 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 48.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1111 REMARK 3 BIN R VALUE (WORKING SET) : 0.3780 REMARK 3 BIN FREE R VALUE : 0.3920 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.50 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 130 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.034 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2991 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 44 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.39 REMARK 3 ESD FROM SIGMAA (A) : 0.60 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.44 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.59 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.30 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.27 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 3.050 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 4.440 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.740 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 6.930 ; 2.500 REMARK 3 REMARK 3 NCS MODEL : RESTRAINED REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1BJF COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : JUL-97 REMARK 200 TEMPERATURE (KELVIN) : 295 REMARK 200 PH : 6.1 REMARK 200 NUMBER OF CRYSTALS USED : 20 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH2R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IIC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : R-AXIS REMARK 200 DATA SCALING SOFTWARE : R-AXIS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12105 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 84.3 REMARK 200 DATA REDUNDANCY : 2.400 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : 0.07300 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 54.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: X-PLOR 3.84 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.1 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 46.67500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 LYS A 3 REMARK 465 GLN A 4 REMARK 465 ASP A 186 REMARK 465 PRO A 187 REMARK 465 SER A 188 REMARK 465 SER A 189 REMARK 465 ALA A 190 REMARK 465 GLY A 191 REMARK 465 GLN A 192 REMARK 465 PHE A 193 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 LYS B 3 REMARK 465 GLN B 4 REMARK 465 ASP B 186 REMARK 465 PRO B 187 REMARK 465 SER B 188 REMARK 465 SER B 189 REMARK 465 ALA B 190 REMARK 465 GLY B 191 REMARK 465 GLN B 192 REMARK 465 PHE B 193 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE ARG A 160 O HOH A 615 2555 0.88 REMARK 500 CA GLY A 78 NH1 ARG B 160 1655 1.16 REMARK 500 CD ARG A 160 O HOH A 615 2555 1.58 REMARK 500 CZ ARG A 160 O HOH A 615 2555 1.79 REMARK 500 C GLY A 78 NH1 ARG B 160 1655 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 160 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 6 -80.19 41.56 REMARK 500 LYS A 7 102.91 45.38 REMARK 500 PRO A 10 -34.63 -39.26 REMARK 500 THR A 20 -164.39 -120.35 REMARK 500 PHE A 56 68.39 -114.32 REMARK 500 THR A 92 -76.02 -71.53 REMARK 500 ASP A 109 77.82 -66.93 REMARK 500 SER A 134 75.77 -164.49 REMARK 500 ASP A 176 88.76 -150.01 REMARK 500 PRO A 177 8.01 -69.65 REMARK 500 SER B 6 -92.12 -100.29 REMARK 500 LYS B 7 169.87 52.84 REMARK 500 THR B 20 -165.38 -119.06 REMARK 500 PHE B 56 69.47 -114.25 REMARK 500 THR B 92 -75.07 -71.80 REMARK 500 ASP B 109 78.30 -67.67 REMARK 500 SER B 134 74.19 -160.62 REMARK 500 PRO B 139 -0.43 -40.68 REMARK 500 GLU B 140 29.27 43.64 REMARK 500 MET B 156 -158.56 -89.87 REMARK 500 ASP B 176 88.32 -152.15 REMARK 500 PRO B 177 4.94 -67.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 501 DISTANCE = 6.01 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 73 OD1 REMARK 620 2 ASN A 75 OD1 77.4 REMARK 620 3 ASP A 77 OD1 79.4 72.5 REMARK 620 4 GLU A 84 OE1 100.7 138.9 148.2 REMARK 620 5 GLU A 84 OE2 101.5 84.2 156.1 55.6 REMARK 620 6 HOH A 505 O 160.1 109.3 84.8 86.6 97.9 REMARK 620 7 ASN A 75 ND2 129.3 52.1 88.4 113.8 72.4 61.5 REMARK 620 8 THR A 79 O 73.7 136.2 70.4 79.1 133.2 89.7 146.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 111 OD1 REMARK 620 2 ASN A 113 OD1 75.0 REMARK 620 3 ASP A 109 OD1 89.9 77.2 REMARK 620 4 TYR A 115 O 146.2 79.8 62.5 REMARK 620 5 GLU A 120 OE2 83.8 158.7 101.9 119.0 REMARK 620 6 ASP A 111 OD2 39.3 95.5 127.5 168.1 67.8 REMARK 620 7 GLU A 120 OE1 135.1 148.7 92.0 69.2 51.9 113.9 REMARK 620 8 HOH A 587 O 108.0 94.4 157.8 95.9 93.3 73.4 84.6 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 157 OD1 REMARK 620 2 ASN A 159 OD1 98.6 REMARK 620 3 ASP A 161 OD1 73.8 78.7 REMARK 620 4 LYS A 163 O 87.5 154.6 79.4 REMARK 620 5 GLU A 168 OE1 109.0 116.1 163.6 84.5 REMARK 620 6 HOH A 513 O 152.5 92.7 84.0 72.3 88.0 REMARK 620 7 GLU A 168 OE2 126.6 66.6 141.2 128.2 50.5 80.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 406 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 73 OD1 REMARK 620 2 ASN B 75 OD1 78.9 REMARK 620 3 GLU B 84 OE1 102.8 143.8 REMARK 620 4 GLU B 84 OE2 103.9 87.0 57.2 REMARK 620 5 HOH B 506 O 165.4 109.4 77.8 88.7 REMARK 620 6 ASP B 77 OD1 81.6 71.9 144.2 156.9 89.5 REMARK 620 7 THR B 79 O 74.4 135.2 77.8 133.9 91.7 69.2 REMARK 620 8 ASN B 75 ND2 132.2 53.9 110.9 69.8 58.8 89.7 144.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 407 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 111 OD1 REMARK 620 2 ASN B 113 OD1 74.3 REMARK 620 3 GLU B 120 OE2 82.4 156.4 REMARK 620 4 HOH B 616 O 82.0 70.3 103.7 REMARK 620 5 TYR B 115 O 144.7 76.8 126.1 106.7 REMARK 620 6 GLU B 120 OE1 135.5 149.5 54.1 113.9 73.1 REMARK 620 7 ASP B 109 OD1 90.3 78.5 105.2 148.7 64.3 92.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 408 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 159 OD1 REMARK 620 2 ASP B 161 OD1 78.4 REMARK 620 3 LYS B 163 O 151.5 79.8 REMARK 620 4 GLU B 168 OE1 115.9 165.1 85.3 REMARK 620 5 HOH B 507 O 74.7 94.1 88.8 86.2 REMARK 620 6 ASP B 157 OD1 102.1 72.4 88.5 106.8 166.5 REMARK 620 7 GLU B 168 OE2 66.6 142.2 126.7 50.3 64.1 127.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 402 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 403 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 404 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 406 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 407 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 408 DBREF 1BJF A 2 193 UNP P61602 NCALD_BOVIN 1 192 DBREF 1BJF B 2 193 UNP P61602 NCALD_BOVIN 1 192 SEQRES 1 A 193 MET GLY LYS GLN ASN SER LYS LEU ARG PRO GLU VAL MET SEQRES 2 A 193 GLN ASP LEU LEU GLU SER THR ASP PHE THR GLU HIS GLU SEQRES 3 A 193 ILE GLN GLU TRP TYR LYS GLY PHE LEU ARG ASP CYS PRO SEQRES 4 A 193 SER GLY HIS LEU SER MET GLU GLU PHE LYS LYS ILE TYR SEQRES 5 A 193 GLY ASN PHE PHE PRO TYR GLY ASP ALA SER LYS PHE ALA SEQRES 6 A 193 GLU HIS VAL PHE ARG THR PHE ASP ALA ASN GLY ASP GLY SEQRES 7 A 193 THR ILE ASP PHE ARG GLU PHE ILE ILE ALA LEU SER VAL SEQRES 8 A 193 THR SER ARG GLY LYS LEU GLU GLN LYS LEU LYS TRP ALA SEQRES 9 A 193 PHE SER MET TYR ASP LEU ASP GLY ASN GLY TYR ILE SER SEQRES 10 A 193 LYS ALA GLU MET LEU GLU ILE VAL GLN ALA ILE TYR LYS SEQRES 11 A 193 MET VAL SER SER VAL MET LYS MET PRO GLU ASP GLU SER SEQRES 12 A 193 THR PRO GLU LYS ARG THR GLU LYS ILE PHE ARG GLN MET SEQRES 13 A 193 ASP THR ASN ARG ASP GLY LYS LEU SER LEU GLU GLU PHE SEQRES 14 A 193 ILE ARG GLY ALA LYS SER ASP PRO SER ILE VAL ARG LEU SEQRES 15 A 193 LEU GLN CYS ASP PRO SER SER ALA GLY GLN PHE SEQRES 1 B 193 MET GLY LYS GLN ASN SER LYS LEU ARG PRO GLU VAL MET SEQRES 2 B 193 GLN ASP LEU LEU GLU SER THR ASP PHE THR GLU HIS GLU SEQRES 3 B 193 ILE GLN GLU TRP TYR LYS GLY PHE LEU ARG ASP CYS PRO SEQRES 4 B 193 SER GLY HIS LEU SER MET GLU GLU PHE LYS LYS ILE TYR SEQRES 5 B 193 GLY ASN PHE PHE PRO TYR GLY ASP ALA SER LYS PHE ALA SEQRES 6 B 193 GLU HIS VAL PHE ARG THR PHE ASP ALA ASN GLY ASP GLY SEQRES 7 B 193 THR ILE ASP PHE ARG GLU PHE ILE ILE ALA LEU SER VAL SEQRES 8 B 193 THR SER ARG GLY LYS LEU GLU GLN LYS LEU LYS TRP ALA SEQRES 9 B 193 PHE SER MET TYR ASP LEU ASP GLY ASN GLY TYR ILE SER SEQRES 10 B 193 LYS ALA GLU MET LEU GLU ILE VAL GLN ALA ILE TYR LYS SEQRES 11 B 193 MET VAL SER SER VAL MET LYS MET PRO GLU ASP GLU SER SEQRES 12 B 193 THR PRO GLU LYS ARG THR GLU LYS ILE PHE ARG GLN MET SEQRES 13 B 193 ASP THR ASN ARG ASP GLY LYS LEU SER LEU GLU GLU PHE SEQRES 14 B 193 ILE ARG GLY ALA LYS SER ASP PRO SER ILE VAL ARG LEU SEQRES 15 B 193 LEU GLN CYS ASP PRO SER SER ALA GLY GLN PHE HET CA A 402 1 HET CA A 403 1 HET CA A 404 1 HET CA B 406 1 HET CA B 407 1 HET CA B 408 1 HETNAM CA CALCIUM ION FORMUL 3 CA 6(CA 2+) FORMUL 9 HOH *44(H2 O) HELIX 1 1 PRO A 10 SER A 19 1 10 HELIX 2 2 GLU A 24 ASP A 37 1 14 HELIX 3 3 MET A 45 ASN A 54 1 10 HELIX 4 4 SER A 62 PHE A 72 1 11 HELIX 5 5 PHE A 82 THR A 92 1 11 HELIX 6 6 LEU A 97 TYR A 108 1 12 HELIX 7 7 LYS A 118 TYR A 129 1 12 HELIX 8 8 GLU A 140 GLU A 142 5 3 HELIX 9 9 PRO A 145 GLN A 155 1 11 HELIX 10 10 LEU A 166 SER A 175 1 10 HELIX 11 11 SER A 178 ARG A 181 1 4 HELIX 12 12 PRO B 10 SER B 19 1 10 HELIX 13 13 GLU B 24 ASP B 37 1 14 HELIX 14 14 MET B 45 ASN B 54 1 10 HELIX 15 15 SER B 62 PHE B 72 1 11 HELIX 16 16 PHE B 82 THR B 92 1 11 HELIX 17 17 LEU B 97 TYR B 108 1 12 HELIX 18 18 LYS B 118 MET B 131 1 14 HELIX 19 19 PRO B 145 GLN B 155 1 11 HELIX 20 20 LEU B 166 SER B 175 1 10 HELIX 21 21 PRO B 177 ARG B 181 5 5 SHEET 1 A 2 HIS A 42 SER A 44 0 SHEET 2 A 2 THR A 79 ASP A 81 -1 N ILE A 80 O LEU A 43 SHEET 1 B 2 HIS B 42 SER B 44 0 SHEET 2 B 2 THR B 79 ASP B 81 -1 N ILE B 80 O LEU B 43 LINK CA CA A 402 OD1 ASP A 73 1555 1555 2.29 LINK CA CA A 402 OD1 ASN A 75 1555 1555 2.00 LINK CA CA A 402 OD1 ASP A 77 1555 1555 2.38 LINK CA CA A 402 OE1 GLU A 84 1555 1555 2.28 LINK CA CA A 402 OE2 GLU A 84 1555 1555 2.40 LINK CA CA A 402 O HOH A 505 1555 1555 2.38 LINK CA CA A 403 OD1 ASP A 111 1555 1555 2.18 LINK CA CA A 403 OD1 ASN A 113 1555 1555 2.13 LINK CA CA A 404 OD1 ASP A 157 1555 1555 2.40 LINK CA CA A 404 OD1 ASN A 159 1555 1555 2.26 LINK CA CA A 404 OD1 ASP A 161 1555 1555 2.01 LINK CA CA A 404 O LYS A 163 1555 1555 2.37 LINK CA CA A 404 OE1 GLU A 168 1555 1555 2.29 LINK CA CA A 404 O HOH A 513 1555 1555 2.29 LINK CA CA B 406 OD1 ASP B 73 1555 1555 2.18 LINK CA CA B 406 OD1 ASN B 75 1555 1555 1.96 LINK CA CA B 406 OE1 GLU B 84 1555 1555 2.24 LINK CA CA B 406 OE2 GLU B 84 1555 1555 2.35 LINK CA CA B 406 O HOH B 506 1555 1555 2.36 LINK CA CA B 407 OD1 ASP B 111 1555 1555 2.24 LINK CA CA B 407 OD1 ASN B 113 1555 1555 2.21 LINK CA CA B 407 OE2 GLU B 120 1555 1555 2.32 LINK CA CA B 407 O HOH B 616 1555 1555 2.20 LINK CA CA B 408 OD1 ASN B 159 1555 1555 2.32 LINK CA CA B 408 OD1 ASP B 161 1555 1555 2.12 LINK CA CA B 408 O LYS B 163 1555 1555 2.31 LINK CA CA B 408 OE1 GLU B 168 1555 1555 2.31 LINK CA CA A 402 ND2 ASN A 75 1555 1555 2.81 LINK CA CA A 402 O THR A 79 1555 1555 2.46 LINK CA CA A 403 OD1 ASP A 109 1555 1555 2.59 LINK CA CA A 403 O TYR A 115 1555 1555 2.50 LINK CA CA A 403 OE2 GLU A 120 1555 1555 2.41 LINK CA CA A 403 OD2 ASP A 111 1555 1555 3.39 LINK CA CA A 403 OE1 GLU A 120 1555 1555 2.57 LINK CA CA A 403 O HOH A 587 1555 1555 2.49 LINK CA CA A 404 OE2 GLU A 168 1555 1555 2.75 LINK CA CA B 406 OD1 ASP B 77 1555 1555 2.46 LINK CA CA B 406 O THR B 79 1555 1555 2.50 LINK CA CA B 406 ND2 ASN B 75 1555 1555 2.75 LINK CA CA B 407 O TYR B 115 1555 1555 2.41 LINK CA CA B 407 OE1 GLU B 120 1555 1555 2.46 LINK CA CA B 407 OD1 ASP B 109 1555 1555 2.52 LINK CA CA B 408 O HOH B 507 1555 1555 2.40 LINK CA CA B 408 OD1 ASP B 157 1555 1555 2.53 LINK CA CA B 408 OE2 GLU B 168 1555 1555 2.76 SITE 1 AC1 6 ASP A 73 ASN A 75 ASP A 77 THR A 79 SITE 2 AC1 6 GLU A 84 HOH A 505 SITE 1 AC2 6 ASP A 109 ASP A 111 ASN A 113 TYR A 115 SITE 2 AC2 6 GLU A 120 HOH A 587 SITE 1 AC3 6 ASP A 157 ASN A 159 ASP A 161 LYS A 163 SITE 2 AC3 6 GLU A 168 HOH A 513 SITE 1 AC4 6 ASP B 73 ASN B 75 ASP B 77 THR B 79 SITE 2 AC4 6 GLU B 84 HOH B 506 SITE 1 AC5 6 ASP B 109 ASP B 111 ASN B 113 TYR B 115 SITE 2 AC5 6 GLU B 120 HOH B 616 SITE 1 AC6 6 ASP B 157 ASN B 159 ASP B 161 LYS B 163 SITE 2 AC6 6 GLU B 168 HOH B 507 CRYST1 42.680 93.350 50.625 90.00 98.29 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023430 0.000000 0.003414 0.00000 SCALE2 0.000000 0.010712 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019962 0.00000 MTRIX1 1 0.473089 -0.846549 0.244009 11.27731 1 MTRIX2 1 -0.851305 -0.510571 -0.120816 21.92868 1 MTRIX3 1 0.226861 -0.150569 -0.962218 9.56027 1