PDBe < PISA < EMBL-EBI

PISA Interface List.

Session Map (id=417-68-F51)

Interfaces in PDB 4r5p crystal.
Space symmetry group: P 1 21 1. Resolution: 2.89 Å

CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) WITH DNA AND A NUCLEOSIDE TRIPHOSPHATE MIMIC ALPHA-CARBOXY NUCLEOSIDE PHOSPHONATE INHIBITOR

Interfaces

##			Structure 1				×	Structure 2						interface area, Å²	ΔⁱG kcal/mol	ΔⁱG P-value	N_HB	N_SB	N_DS	CSS
Id	NN	«»	Range	ⁱN_at	ⁱN_res	Surface Å²	×	Range	Symmetry op-n	Sym.ID	ⁱN_at	ⁱN_res	Surface Å²	interface area, Å²	ΔⁱG kcal/mol	ΔⁱG P-value	N_HB	N_SB	N_DS	CSS
1	`1`		B	`288`	`74`	`21094`	`◊`	A	x,y,z	`1_555`	`310`	`85`	`29509`	`2810.5`	`-24.3`	`0.203`	`32`	`5`	`0`	`0.715`
	`2`		D	`294`	`74`	`21439`	`◊`	C	x,y,z	`1_555`	`313`	`86`	`29500`	`2791.8`	`-25.1`	`0.207`	`33`	`9`	`0`	`0.715`
	*Average:*													`2801.1`	`-24.7`	`0.205`	`33`	`7`	`0`	`0.715`
2	`3`		T	`146`	`18`	`5616`	`◊`	A	x,y,z	`1_555`	`167`	`59`	`29509`	`1360.3`	`-5.1`	`0.681`	`4`	`0`	`0`	`0.130`
	`4`		E	`145`	`19`	`5579`	`◊`	C	x,y,z	`1_555`	`158`	`54`	`29500`	`1286.6`	`-5.8`	`0.605`	`10`	`0`	`0`	`0.130`
	*Average:*													`1323.5`	`-5.5`	`0.643`	`7`	`0`	`0`	`0.130`
3	`5`		P	`100`	`19`	`4587`	`◊`	T	x,y,z	`1_555`	`96`	`21`	`5616`	`929.9`	`-12.8`	`0.598`	`62`	`0`	`0`	`1.000`
	`6`		F	`95`	`19`	`4566`	`◊`	E	x,y,z	`1_555`	`95`	`21`	`5579`	`923.9`	`-11.8`	`0.605`	`63`	`0`	`0`	`1.000`
	*Average:*													`926.9`	`-12.3`	`0.601`	`63`	`0`	`0`	`1.000`
4	`7`		P	`92`	`14`	`4587`	`◊`	A	x,y,z	`1_555`	`104`	`32`	`29509`	`880.2`	`-8.6`	`0.538`	`13`	`0`	`0`	`0.557`
	`8`		F	`88`	`14`	`4566`	`◊`	C	x,y,z	`1_555`	`102`	`31`	`29500`	`868.6`	`-10.0`	`0.347`	`10`	`0`	`0`	`0.557`
	*Average:*													`874.4`	`-9.3`	`0.442`	`12`	`0`	`0`	`0.557`
5	`9`		D	`56`	`12`	`21439`	`◊`	B	-x,y-1/2,-z+1	`2_546`	`57`	`16`	`21094`	`556.6`	`2.3`	`0.844`	`8`	`11`	`0`	`0.000`
6	`10`		C	`47`	`13`	`29500`	`◊`	A	-x,y-1/2,-z	`2_545`	`42`	`11`	`29509`	`418.8`	`-2.5`	`0.458`	`3`	`0`	`0`	`0.000`
7	`11`		C	`44`	`10`	`29500`	`◊`	A	-x-1,y-1/2,-z+1	`2_446`	`49`	`11`	`29509`	`411.4`	`-2.8`	`0.489`	`6`	`0`	`0`	`0.000`
8	`12`		D	`29`	`10`	`21439`	`◊`	A	-x,y-1/2,-z+1	`2_546`	`37`	`15`	`29509`	`276.9`	`2.7`	`0.824`	`5`	`3`	`0`	`0.000`
9	`13`		[SUC]B:501	`20`	`1`	`454`	`f`	B	x,y,z	`1_555`	`37`	`14`	`21094`	`267.3`	`4.3`	`0.717`	`4`	`0`	`0`	`0.000`
10	`14`		B	`30`	`9`	`21094`	`◊`	C	x,y,z	`1_555`	`30`	`13`	`29500`	`262.4`	`-2.6`	`0.361`	`2`	`0`	`0`	`0.000`
11	`15`		[MRG]F:817	`25`	`1`	`560`	`cf`	F	x,y,z	`1_555`	`33`	`2`	`4566`	`261.0`	`4.6`	`0.797`	`0`	`0`	`0`	`0.000`
	`16`		[MRG]P:817	`25`	`1`	`554`	`cf`	P	x,y,z	`1_555`	`30`	`2`	`4587`	`256.1`	`4.6`	`0.769`	`1`	`0`	`0`	`0.000`
	*Average:*													`258.5`	`4.6`	`0.783`	`1`	`0`	`0`	`0.000`
12	`17`		[SUC]D:501	`20`	`1`	`443`	`◊`	D	x,y,z	`1_555`	`37`	`13`	`21439`	`257.6`	`3.3`	`0.627`	`3`	`0`	`0`	`0.000`
13	`18`		[3JY]C:602	`22`	`1`	`475`	`f`	C	x,y,z	`1_555`	`40`	`12`	`29500`	`243.6`	`1.5`	`0.585`	`1`	`0`	`0`	`0.000`
	`19`		[3JY]A:602	`21`	`1`	`465`	`f`	A	x,y,z	`1_555`	`40`	`15`	`29509`	`236.0`	`1.1`	`0.565`	`2`	`0`	`0`	`0.000`
	*Average:*													`239.8`	`1.3`	`0.575`	`2`	`0`	`0`	`0.000`
14	`20`		B	`23`	`9`	`21094`	`◊`	A	-x,y-1/2,-z+1	`2_546`	`24`	`9`	`29509`	`205.1`	`0.5`	`0.726`	`1`	`3`	`0`	`0.000`
15	`21`		[MRG]F:817	`9`	`1`	`560`	`◊`	C	x,y,z	`1_555`	`12`	`7`	`29500`	`122.6`	`-2.7`	`0.105`	`1`	`0`	`0`	`0.120`
	`22`		[MRG]P:817	`8`	`1`	`554`	`◊`	A	x,y,z	`1_555`	`13`	`7`	`29509`	`105.9`	`-1.8`	`0.158`	`0`	`0`	`0`	`0.120`
	*Average:*													`114.2`	`-2.2`	`0.132`	`1`	`0`	`0`	`0.120`
16	`23`		[3JY]C:602	`13`	`1`	`475`	`◊`	F	x,y,z	`1_555`	`14`	`1`	`4566`	`108.2`	`4.0`	`0.759`	`0`	`0`	`0`	`0.000`
	`24`		[3JY]A:602	`13`	`1`	`465`	`◊`	P	x,y,z	`1_555`	`14`	`1`	`4587`	`106.4`	`4.0`	`0.752`	`0`	`0`	`0`	`0.000`
	*Average:*													`107.3`	`4.0`	`0.755`	`0`	`0`	`0`	`0.000`
17	`25`		[MRG]F:817	`8`	`1`	`560`	`◊`	E	x,y,z	`1_555`	`13`	`3`	`5579`	`101.7`	`-0.4`	`0.463`	`3`	`0`	`0`	`0.046`
	`26`		[MRG]P:817	`10`	`1`	`554`	`◊`	T	x,y,z	`1_555`	`13`	`3`	`5616`	`99.8`	`-0.2`	`0.489`	`3`	`0`	`0`	`0.046`
	*Average:*													`100.7`	`-0.3`	`0.476`	`3`	`0`	`0`	`0.046`
18	`27`		[SO4]C:604	`5`	`1`	`185`	`f`	D	x,y,z	`1_555`	`13`	`7`	`21439`	`92.6`	`-11.8`	`0.739`	`1`	`0`	`0`	`0.153`
19	`28`		[SO4]C:604	`5`	`1`	`185`	`◊`	C	x,y,z	`1_555`	`10`	`3`	`29500`	`79.4`	`-10.0`	`0.527`	`0`	`0`	`0`	`0.124`
20	`29`		P	`10`	`3`	`4587`	`◊`	B	x,y,z	`1_555`	`10`	`4`	`21094`	`75.2`	`-2.4`	`0.417`	`1`	`0`	`0`	`0.024`
	`30`		F	`11`	`3`	`4566`	`◊`	D	x,y,z	`1_555`	`8`	`3`	`21439`	`70.9`	`-2.8`	`0.372`	`0`	`0`	`0`	`0.024`
	*Average:*													`73.0`	`-2.6`	`0.394`	`1`	`0`	`0`	`0.024`
21	`31`		E	`7`	`4`	`5579`	`◊`	D	x,y,z	`1_555`	`7`	`4`	`21439`	`63.9`	`-2.2`	`0.289`	`1`	`0`	`0`	`0.021`
	`32`		T	`7`	`4`	`5616`	`◊`	B	x,y,z	`1_555`	`5`	`4`	`21094`	`49.5`	`-1.6`	`0.416`	`2`	`0`	`0`	`0.021`
	*Average:*													`56.7`	`-1.9`	`0.352`	`2`	`0`	`0`	`0.021`
22	`33`		[3JY]C:602	`5`	`1`	`475`	`◊`	E	x,y,z	`1_555`	`7`	`2`	`5579`	`61.5`	`0.1`	`0.498`	`1`	`0`	`0`	`0.009`
	`34`		[3JY]A:602	`6`	`1`	`465`	`◊`	T	x,y,z	`1_555`	`7`	`2`	`5616`	`60.7`	`-0.2`	`0.459`	`1`	`0`	`0`	`0.009`
	*Average:*													`61.1`	`-0.0`	`0.478`	`1`	`0`	`0`	`0.009`
23	`35`		D	`8`	`4`	`21439`	`◊`	A	x,y-1,z	`1_545`	`7`	`3`	`29509`	`57.9`	`1.6`	`0.870`	`0`	`0`	`0`	`0.000`
24	`36`		[MG]A:603	`1`	`1`	`98`	`f`	A	x,y,z	`1_555`	`13`	`9`	`29509`	`57.1`	`-8.0`	`0.000`	`0`	`0`	`0`	`0.308`
	`37`		[MG]C:601	`1`	`1`	`98`	`f`	C	x,y,z	`1_555`	`11`	`8`	`29500`	`53.8`	`-7.9`	`0.000`	`0`	`0`	`0`	`0.308`
	*Average:*													`55.4`	`-8.0`	`0.000`	`0`	`0`	`0`	`0.308`
25	`38`		[MG]A:601	`1`	`1`	`98`	`f`	A	x,y,z	`1_555`	`10`	`6`	`29509`	`37.5`	`-5.0`	`0.000`	`0`	`0`	`0`	`0.193`
	`39`		[MG]C:603	`1`	`1`	`98`	`f`	C	x,y,z	`1_555`	`7`	`5`	`29500`	`35.9`	`-4.8`	`0.000`	`0`	`0`	`0`	`0.193`
	*Average:*													`36.7`	`-4.9`	`0.000`	`0`	`0`	`0`	`0.193`
26	`40`		F	`5`	`2`	`4566`	`◊`	T	x,y-1,z	`1_545`	`7`	`1`	`5616`	`36.1`	`0.7`	`0.645`	`0`	`0`	`0`	`0.000`
27	`41`		[3JY]C:602	`5`	`1`	`475`	`f`	[MG]C:603	x,y,z	`1_555`	`1`	`1`	`98`	`35.7`	`-5.3`	`0.000`	`0`	`0`	`0`	`0.205`
	`42`		[3JY]A:602	`4`	`1`	`465`	`f`	[MG]A:601	x,y,z	`1_555`	`1`	`1`	`98`	`35.2`	`-5.3`	`0.000`	`0`	`0`	`0`	`0.205`
	*Average:*													`35.5`	`-5.3`	`0.000`	`0`	`0`	`0`	`0.205`
28	`43`		[MG]A:603	`1`	`1`	`98`	`◊`	T	x,y,z	`1_555`	`1`	`1`	`5616`	`10.9`	`-1.7`	`0.000`	`0`	`0`	`0`	`0.022`
	`44`		[MG]C:601	`1`	`1`	`98`	`◊`	E	x,y,z	`1_555`	`1`	`1`	`5579`	`6.1`	`-0.9`	`0.000`	`0`	`0`	`0`	`0.022`
	*Average:*													`8.5`	`-1.3`	`0.000`	`0`	`0`	`0`	`0.022`
29	`45`		F	`4`	`2`	`4566`	`◊`	A	x,y-1,z	`1_545`	`3`	`1`	`29509`	`8.6`	`0.1`	`0.633`	`0`	`0`	`0`	`0.000`
30	`46`		[SUC]D:501	`1`	`1`	`443`	`f`	F	x,y,z	`1_555`	`1`	`1`	`4566`	`0.7`	`-0.0`	`0.311`	`0`	`0`	`0`	`0.000`

PDBe PISA v1.52 [20/10/2014]

Protein Data Bank
in Europe

Bringing Structure to Biology

PDBePISA

Protein Data Bank in Europe

Bringing Structure to Biology

PDBePISA

Protein Data Bank
in Europe