OLDERADO

OLDERADO cluster and domain composition for PDB entry 2K0L

NMR structure of the transmembrane domain of the Outer Membrane Protein A from Klebsiella pneumoniae in DHPC micelles.
Summary of Olderado results
Most representative model 3
Largest domain comprises residues Chain A: 18-27, 51-75, 91-104, 107-123, 136-153, 156-164, 183-194
RMSD of all models in ensemble (Cα atoms) 12.0 Å

Protein domains shown as surfaces Representative models from each cluster
View in 3D View in 3D

Domain composition (NMRCore)
Domain number and colour code Residues Core Cumulative core
1 Chain A: 18-27, 51-75, 91-104, 107-123, 136-153, 156-164, 183-194 93.8 % 93.8 %
2 Chain A: 28-30 2.7 % 96.4 %
3 Chain A: 203-203, 205-205 1.8 % 98.2 %
4 Chain A: 207-207, 209-209 1.8 % 100.0 %

Cluster identification (NMRClust)
Cluster number and colour code Representative Members
1 3 1, 3, 6, 7, 8, 9, 13, 14, 16, 19
2 18 12, 15, 18, 20
3 11 10, 11, 17
4 5 2, 5
 
List of outliers (subfamily with one member): 4