OLDERADO

OLDERADO cluster and domain composition for PDB entry 2DJS

Solution structures of the fn3 domain of human ephrin type-B receptor 1
Summary of Olderado results
Most representative model 1
Largest domain comprises residues Chain A: 11-45, 62-82, 97-101
RMSD of all models in ensemble (Cα atoms) 2.3 Å

Protein domains shown as surfaces Representative models from each cluster
View in 3D View in 3D

Domain composition (NMRCore)
Domain number and colour code Residues Core Cumulative core
1 Chain A: 11-45, 62-82, 97-101 64.2 % 64.2 %
2 Chain A: 83-92 10.5 % 74.7 %
3 Chain A: 54-61 8.4 % 83.2 %
4 Chain A: 7-10 4.2 % 87.4 %
5 Chain A: 46-49 4.2 % 91.6 %
6 Chain A: 50-53 4.2 % 95.8 %
7 Chain A: 93-96 4.2 % 100.0 %

Cluster identification (NMRClust)
Cluster number and colour code Representative Members
1 1 1, 2, 3, 4, 10, 11, 12, 13, 14, 16, 17, 18, 19, 20
2 7 6, 7, 8, 15
 
List of outliers (subfamily with one member): 5, 9