OLDERADO

OLDERADO cluster and domain composition for PDB entry 2DEN

Solution Structure of the Ubiquitin-Associated Domain of Human BMSC-UbP and its Complex with Ubiquitin
Summary of Olderado results
Most representative model 1
Largest domain comprises residues B.1-B.71
RMSD of all models in ensemble (Cα atoms) 1.9 Å

Protein domains shown as surfaces Representative models from each cluster
View in 3D View in 3D

Domain composition (NMRCore)
Domain number and colour code Residues Core Cumulative core
1 B.1-B.71 60.7 % 60.7 %
2 A.80-A.93 12.0 % 72.7 %
3 A.65-A.77 11.1 % 83.8 %
4 A.94-A.105 10.3 % 94.0 %
5 B.72-B.74 2.6 % 96.6 %
6 A.78-A.79 1.7 % 98.3 %
7 A.107-A.108 1.7 % 100.0 %

Cluster identification (NMRClust)
Cluster number and colour code Representative Members
1 1 1, 3, 4, 5, 9, 10
2 8 2, 7, 8
 
List of outliers (subfamily with one member): 6