OLDERADO

OLDERADO cluster and domain composition for PDB entry 1UM1

Solution Structure of RSGI RUH-007, PDZ domain in Human cDNA
Summary of Olderado results
Most representative model 13
Largest domain comprises residues Chain A: 8-15, 44-65, 88-93
RMSD of all models in ensemble (Cα atoms) 3.2 Å

Protein domains shown as surfaces Representative models from each cluster
View in 3D View in 3D

Domain composition (NMRCore)
Domain number and colour code Residues Core Cumulative core
1 Chain A: 8-15, 44-65, 88-93 38.7 % 38.7 %
2 Chain A: 23-27, 34-43 16.1 % 54.8 %
3 Chain A: 28-33, 98-103 12.9 % 67.7 %
4 Chain A: 72-83 12.9 % 80.6 %
5 Chain A: 16-20 5.4 % 86.0 %
6 Chain A: 66-70 5.4 % 91.4 %
7 Chain A: 94-97 4.3 % 95.7 %
8 Chain A: 21-22 2.1 % 97.9 %
9 Chain A: 86-87 2.1 % 100.0 %

Cluster identification (NMRClust)
Cluster number and colour code Representative Members
1 13 2, 4, 7, 10, 13, 14, 20
2 19 12, 15, 16, 17, 18, 19
3 5 1, 5, 11
4 3 3, 8, 9
 
List of outliers (subfamily with one member): 6