OLDERADO

OLDERADO cluster and domain composition for PDB entry 1NXI

Solution structure of Vibrio cholerae protein VC0424
Summary of Olderado results
Most representative model 11
Largest domain comprises residues Chain A: 41-49, 65-71, 82-89
RMSD of all models in ensemble (Cα atoms) 4.8 Å

Protein domains shown as surfaces Representative models from each cluster
View in 3D View in 3D

Domain composition (NMRCore)
Domain number and colour code Residues Core Cumulative core
1 Chain A: 41-49, 65-71, 82-89 23.1 % 23.1 %
2 Chain A: 12-30 18.3 % 41.3 %
3 Chain A: 106-120 14.4 % 55.8 %
4 Chain A: 92-105 13.5 % 69.2 %
5 Chain A: 50-60 10.6 % 79.8 %
6 Chain A: 61-64 3.9 % 83.7 %
7 Chain A: 35-37 2.9 % 86.5 %
8 Chain A: 38-40 2.9 % 89.4 %
9 Chain A: 72-74 2.9 % 92.3 %
10 Chain A: 10-11 1.9 % 94.2 %
11 Chain A: 32-33 1.9 % 96.1 %
12 Chain A: 80-81 1.9 % 98.1 %
13 Chain A: 90-91 1.9 % 100.0 %

Cluster identification (NMRClust)
Cluster number and colour code Representative Members
1 11 11, 13, 14, 16, 19
2 20 1, 6, 10, 20
3 15 5, 15
4 3 2, 3
5 8 7, 8
6 17 9, 17
 
List of outliers (subfamily with one member): 4, 12, 18