› 6xu6

Electron Microscopy
3.5Å resolution

Drosophila melanogaster Testis 80S ribosome

Released:
DOI: 10.2210/pdb6xu6/pdb
PDB entry 6xu6 coloured by chain, front view.
PDB entry 6xu6 coloured by chain, side view.
PDB entry 6xu6 coloured by chain, top view.
Source organism: Drosophila melanogaster
Primary publication:
Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching.
Hopes T, Norris K, Agapiou M, McCarthy CGP, Lewis PA, O'Connell MJ, Fontana J, Aspden JL
Nucleic Acids Res 50 2240-2257 (2022)
PMID: 34283226
Related structures: EMD-10622

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
hetero 82-mer (preferred)
PDBe Complex ID:
PDB-CPX-106546 (preferred)
Entry contents:
77 distinct polypeptide molecules
5 distinct RNA molecules
Macromolecules (82 distinct):
Small ribosomal subunit protein uS2 Chain: AA
Molecule details ›
Chain: AA
Length: 218 amino acids
Theoretical weight: 24.65 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P38979 (Residues: 6-223; Coverage: 81%)
Gene names: CG14792, sta
Sequence domains:
Large ribosomal subunit protein uL2 Chain: CA
Molecule details ›
Chain: CA
Length: 253 amino acids
Theoretical weight: 27.58 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9V3G1 (Residues: 1-253; Coverage: 99%)
Gene names: CG1263, RpL8
Sequence domains:
Small ribosomal subunit protein eS1 Chain: AB
Molecule details ›
Chain: AB
Length: 220 amino acids
Theoretical weight: 25.63 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P55830 (Residues: 17-236; Coverage: 82%)
Gene names: C3, CG2168, M(4)101, RpS3A
Sequence domains: Ribosomal S3Ae family
Large ribosomal subunit protein uL3 Chain: CB
Molecule details ›
Chain: CB
Length: 414 amino acids
Theoretical weight: 46.86 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: O16797 (Residues: 1-414; Coverage: 100%)
Gene names: CG4863, RpL3
Sequence domains: Ribosomal protein L3
Small ribosomal subunit protein uS5 Chain: AC
Molecule details ›
Chain: AC
Length: 227 amino acids
Theoretical weight: 24.84 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P31009 (Residues: 38-264; Coverage: 85%)
Gene names: CG5920, RpS2, sop
Sequence domains:
Large ribosomal subunit protein uL4 Chain: CC
Molecule details ›
Chain: CC
Length: 392 amino acids
Theoretical weight: 44.16 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P09180 (Residues: 2-393; Coverage: 98%)
Gene names: CG5502, RpL1, RpL4
Sequence domains:
Small ribosomal subunit protein RACK1 Chain: Ag
Molecule details ›
Chain: Ag
Length: 318 amino acids
Theoretical weight: 35.66 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: O18640 (Residues: 1-318; Coverage: 100%)
Gene names: CG7111, Rack1
Sequence domains: WD domain, G-beta repeat
Small ribosomal subunit protein uS10 Chain: AU
Molecule details ›
Chain: AU
Length: 102 amino acids
Theoretical weight: 11.68 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P55828 (Residues: 18-119; Coverage: 85%)
Gene names: CG15693, RpS20
Sequence domains: Ribosomal protein S10p/S20e
Small ribosomal subunit protein uS12 Chain: AX
Molecule details ›
Chain: AX
Length: 143 amino acids
Theoretical weight: 16.05 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q8T3U2 (Residues: 1-143; Coverage: 100%)
Gene names: CG8415, RpS23
Sequence domains: Ribosomal protein S12/S23
Small ribosomal subunit protein eS12 Chain: AM
Molecule details ›
Chain: AM
Length: 119 amino acids
Theoretical weight: 13.22 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P80455 (Residues: 21-139; Coverage: 86%)
Gene names: CG11271, RpS12, RpS12E
Sequence domains: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Small ribosomal subunit protein uS14 Chain: Ad
Molecule details ›
Chain: Ad
Length: 52 amino acids
Theoretical weight: 6.2 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9VH69 (Residues: 5-56; Coverage: 93%)
Gene names: CG8495, RpS29
Sequence domains: Ribosomal protein S14p/S29e
Small ribosomal subunit protein uS15 Chain: AN
Molecule details ›
Chain: AN
Length: 150 amino acids
Theoretical weight: 17.09 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q03334 (Residues: 2-151; Coverage: 99%)
Gene names: CG13389, M(2)32A, Rp17, RpS13
Sequence domains:
Small ribosomal subunit protein uS17 Chain: AL
Molecule details ›
Chain: AL
Length: 155 amino acids
Theoretical weight: 18.15 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q0E9B6 (Residues: 1-155; Coverage: 100%)
Gene names: CG8857, RpS11
Sequence domains:
Small ribosomal subunit protein eS17 Chain: AR
Molecule details ›
Chain: AR
Length: 120 amino acids
Theoretical weight: 14.01 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P17704 (Residues: 1-120; Coverage: 92%)
Gene names: CG3922, M(3)67C, RpS17
Sequence domains: Ribosomal S17
Small ribosomal subunit protein uS19 Chain: AP
Molecule details ›
Chain: AP
Length: 124 amino acids
Theoretical weight: 14.5 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q7JZW2 (Residues: 8-131; Coverage: 84%)
Gene names: CG8332, Dmel\CG8332, Dmel_CG8332, RpS15, S15, anon-EST:Posey137, anon-EST:Posey185, s15
Sequence domains: Ribosomal protein S19
Small ribosomal subunit protein eS21 Chain: AV
Molecule details ›
Chain: AV
Length: 82 amino acids
Theoretical weight: 8.88 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: O76927 (Residues: 1-82; Coverage: 99%)
Gene names: CG2986, RpS21, oho23B
Sequence domains: Ribosomal protein S21e
40S ribosomal protein S24 Chain: AY
Molecule details ›
Chain: AY
Length: 126 amino acids
Theoretical weight: 14.55 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9W229 (Residues: 4-129; Coverage: 96%)
Gene names: BcDNA:RE59324, CG3751, Dmel\CG3751, Dmel_CG3751, Rp S24, RpS24, S24, l(2)SH2 2053, l(2)SH2053
Sequence domains: Ribosomal protein S24e
Small ribosomal subunit protein eS25 Chain: AZ
Molecule details ›
Chain: AZ
Length: 74 amino acids
Theoretical weight: 8.64 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P48588 (Residues: 40-113; Coverage: 63%)
Gene names: CG6684, RpS25, RpS31
Sequence domains: S25 ribosomal protein
Small ribosomal subunit protein eS26 Chain: Aa
Molecule details ›
Chain: Aa
Length: 107 amino acids
Theoretical weight: 12.41 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P13008 (Residues: 2-108; Coverage: 94%)
Gene names: CG10305, RpS26
Sequence domains: Ribosomal protein S26e
40S ribosomal protein S27 Chain: Ab
Molecule details ›
Chain: Ab
Length: 84 amino acids
Theoretical weight: 9.38 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9VBU9 (Residues: 1-84; Coverage: 100%)
Gene names: CG10423, Dmel\CG10423, Dmel_CG10423, Q9VBU9_DROME, Rp S27, RpS27, anon-EST:Posey295
Sequence domains: Ribosomal protein S27
Small ribosomal subunit protein uS3 Chain: AD
Molecule details ›
Chain: AD
Length: 227 amino acids
Theoretical weight: 25.47 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q06559 (Residues: 3-229; Coverage: 92%)
Gene names: CG6779, M(3)95A, RpS3
Sequence domains:
RH08962p Chain: Ae
Molecule details ›
Chain: Ae
Length: 58 amino acids
Theoretical weight: 6.67 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q7JYY0 (Residues: 89-146; Coverage: 40%)
Gene names: CG15697, RpS30
Sequence domains: Ribosomal protein S30
Small ribosomal subunit protein eS31 Chain: Af
Molecule details ›
Chain: Af
Length: 80 amino acids
Theoretical weight: 9.42 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P15357 (Residues: 77-156; Coverage: 51%)
Gene names: CG5271, RpS27A, UB3-D, UBI-F80, Ubi-m
Sequence domains: Ribosomal protein S27a
Small ribosomal subunit protein uS4 Chain: AJ
Molecule details ›
Chain: AJ
Length: 181 amino acids
Theoretical weight: 21.33 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P55935 (Residues: 4-184; Coverage: 93%)
Gene names: CG3395, RpS9
Sequence domains:
Large ribosomal subunit protein uL15 Chain: Ca
Molecule details ›
Chain: Ca
Length: 149 amino acids
Theoretical weight: 17.07 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P41092 (Residues: 1-149; Coverage: 100%)
Gene names: CG15442, RpL27A, RpL27Aa, RpL27Ab, RpL27a2
Sequence domains: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
Large ribosomal subunit protein eL15 Chain: CN
Molecule details ›
Chain: CN
Length: 203 amino acids
Theoretical weight: 24.26 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: O17445 (Residues: 2-204; Coverage: 100%)
Gene names: CG17420, RpL15, ZITI
Sequence domains: Ribosomal L15
Large ribosomal subunit protein uL16 Chain: CI
Molecule details ›
Chain: CI
Length: 217 amino acids
Theoretical weight: 25.45 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: O61231 (Residues: 2-218; Coverage: 100%)
Gene names: CG17521, Qm, RpL10
Sequence domains: Ribosomal protein L16p/L10e
Large ribosomal subunit protein uL18 Chain: CD
Molecule details ›
Chain: CD
Length: 290 amino acids
Theoretical weight: 33.14 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9W5R8 (Residues: 8-297; Coverage: 97%)
Gene names: CG17489, RpL5, yip6
Sequence domains:
Large ribosomal subunit protein eL18 Chain: CQ
Molecule details ›
Chain: CQ
Length: 187 amino acids
Theoretical weight: 21.58 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9VS34 (Residues: 2-188; Coverage: 100%)
Gene names: CG8615, RpL18
Sequence domains: Ribosomal protein 60S L18 and 50S L18e
Large ribosomal subunit protein eL19 Chain: CR
Molecule details ›
Chain: CR
Length: 203 amino acids
Theoretical weight: 24.07 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P36241 (Residues: 1-203; Coverage: 100%)
Gene names: CG2746, M(2)60E, RpL19
Sequence domains: Ribosomal protein L19e
Large ribosomal subunit protein eL20 Chain: CS
Molecule details ›
Chain: CS
Length: 173 amino acids
Theoretical weight: 20.59 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P41093 (Residues: 5-177; Coverage: 98%)
Gene names: CG6510, RpL18A
Sequence domains: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
60S ribosomal protein L21 Chain: CT
Molecule details ›
Chain: CT
Length: 158 amino acids
Theoretical weight: 18.39 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9V9M7 (Residues: 2-159; Coverage: 99%)
Gene names: BcDNA:RH06526, CG12775, Dmel\CG12775, Dmel_CG12775, L21e, RPL21, Rp L21, RpL21, anon-EST:Posey18, anon-EST:Posey30
Sequence domains: Ribosomal protein L21e
Large ribosomal subunit protein uL22 Chain: CP
Molecule details ›
Chain: CP
Length: 185 amino acids
Theoretical weight: 21.51 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9W3W8 (Residues: 2-186; Coverage: 100%)
Gene names: CG3203, RpL17
Sequence domains: Ribosomal protein L22p/L17e
Large ribosomal subunit protein uL23 N-terminal domain-containing protein Chain: CX
Molecule details ›
Chain: CX
Length: 120 amino acids
Theoretical weight: 13.98 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: A1A6X4 (Residues: 150-269; Coverage: 45%)
Gene name: RpL23a
Sequence domains:
Large ribosomal subunit protein uL24 Chain: CY
Molecule details ›
Chain: CY
Length: 131 amino acids
Theoretical weight: 15.34 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9VVU2 (Residues: 2-132; Coverage: 88%)
Gene names: CG6846, Dmel\CG6846, Dmel_CG6846, L24, L26, RPL26, Rp L26, RpL26, lincRNA.S5499
Sequence domains:
60S ribosomal protein L27 Chain: CZ
Molecule details ›
Chain: CZ
Length: 134 amino acids
Theoretical weight: 15.81 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9VBN5 (Residues: 2-135; Coverage: 99%)
Gene names: CG4759, Dmel\CG4759, Dmel_CG4759, RPL27, RpL27, RpL27e, chr3R:21510055..21510241
Sequence domains:
Large ribosomal subunit protein eL28 Chain: Cr
Molecule details ›
Chain: Cr
Length: 134 amino acids
Theoretical weight: 14.92 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9VZS5 (Residues: 2-135; Coverage: 93%)
Gene names: CG12740, RpL28
Sequence domains: Ribosomal L28e protein family
60S ribosomal protein L35 Chain: Ch
Molecule details ›
Chain: Ch
Length: 123 amino acids
Theoretical weight: 14.49 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9W499 (Residues: 1-123; Coverage: 100%)
Gene names: BcDNA:RE09547, CG4111, Dmel\CG4111, Dmel_CG4111, Rp L35, RpL35, RpL35-RB, RpL35e, anon-EST:Posey157, anon-EST:fe1C12
Sequence domains: Ribosomal L29 protein
Large ribosomal subunit protein eL29 Chain: Cb
Molecule details ›
Chain: Cb
Length: 75 amino acids
Theoretical weight: 8.81 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q24154 (Residues: 2-76; Coverage: 99%)
Gene names: CG10071, RpL29, RpL43
Sequence domains: Ribosomal L29e protein family
Large ribosomal subunit protein eL30 Chain: Cc
Molecule details ›
Chain: Cc
Length: 100 amino acids
Theoretical weight: 11.04 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9VJ19 (Residues: 10-109; Coverage: 90%)
Gene names: BcDNA:RE25263, BcDNA:RH09938, CG10652, Dmel\CG10652, Dmel_CG10652, L30, L30e, RPL30, Rp L30, RpL30, Rpl30, anon-EST:fe1D4, l(2)01265, l(2)SH0229, l(2)SH2 0229, l(2)k09918, plume
Sequence domains: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Large ribosomal subunit protein eL32 Chain: Ce
Molecule details ›
Chain: Ce
Length: 132 amino acids
Theoretical weight: 15.82 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P04359 (Residues: 1-132; Coverage: 99%)
Gene names: CG7939, M(3)99D, RpL32, rp49
Sequence domains: Ribosomal protein L32
Large ribosomal subunit protein eL33 Chain: Cf
Molecule details ›
Chain: Cf
Length: 157 amino acids
Theoretical weight: 17.7 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9VNB9 (Residues: 1-157; Coverage: 100%)
Gene names: CG2099, Dmel\CG2099, Dmel_CG2099, L35a, Rp L35A, RpL35A, Rpl35A, anon-EST:Posey39
Sequence domains: Ribosomal protein L35Ae
Large ribosomal subunit protein eL36 Chain: Ci
Molecule details ›
Chain: Ci
Length: 113 amino acids
Theoretical weight: 13.34 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P49630 (Residues: 1-113; Coverage: 98%)
Gene names: CG7622, M(1)1B, RpL36
Sequence domains: Ribosomal protein L36e
Large ribosomal subunit protein eL38 Chain: Ck
Molecule details ›
Chain: Ck
Length: 70 amino acids
Theoretical weight: 8.22 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9W5N2 (Residues: 1-70; Coverage: 100%)
Gene names: CG18001, RpL38
Sequence domains: Ribosomal L38e protein family
Large ribosomal subunit protein eL39 Chain: Cl
Molecule details ›
Chain: Cl
Length: 50 amino acids
Theoretical weight: 6.19 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: O16130 (Residues: 2-51; Coverage: 98%)
Gene names: CG3997, RpL39, RpL46, rp46
Sequence domains: Ribosomal L39 protein
Large ribosomal subunit protein eL40 Chain: Cm
Molecule details ›
Chain: Cm
Length: 52 amino acids
Theoretical weight: 6.2 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P18101 (Residues: 77-128; Coverage: 41%)
Gene names: CG2960, RpL40, UBI-F52, Ubi-f
Sequence domains: Ribosomal L40e family
60S ribosomal protein L41 Chain: Cn
Molecule details ›
Chain: Cn
Length: 25 amino acids
Theoretical weight: 3.42 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q962S2 (Residues: 1-25; Coverage: 100%)
Gene names: BEST:LP07070, BcDNA:LP07070, BcDNA:RE63504, CG30425, CR30425, Dmel\CG30425, Dmel_CG30425, L41, RpL41, Rpl41, pncr005:2R
Sequence domains: Ribosomal protein L41
Large ribosomal subunit protein eL43 Chain: Cp
Molecule details ›
Chain: Cp
Length: 91 amino acids
Theoretical weight: 10.2 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9VMU4 (Residues: 2-92; Coverage: 99%)
Gene names: CG5827, RpL37A
Sequence domains: Ribosomal L37ae protein family
Large ribosomal subunit protein eL42 Chain: Co
Molecule details ›
Chain: Co
Length: 104 amino acids
Theoretical weight: 12.54 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: C5WLN8 (Residues: 9-112; Coverage: 93%)
Gene name: RpL36A-RA
Sequence domains: Ribosomal protein L44
Large ribosomal subunit protein uL5 Chain: CJ
Molecule details ›
Chain: CJ
Length: 182 amino acids
Theoretical weight: 20.9 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P46222 (Residues: 1-182; Coverage: 99%)
Gene names: CG7726, RPL11A, RpL11
Sequence domains:
Large ribosomal subunit protein uL6 Chain: CH
Molecule details ›
Chain: CH
Length: 190 amino acids
Theoretical weight: 21.43 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P50882 (Residues: 1-190; Coverage: 100%)
Gene names: CG6141, M(2)32D, RpL9
Sequence domains: Ribosomal protein L6
Large ribosomal subunit protein eL6 Chain: CE
Molecule details ›
Chain: CE
Length: 228 amino acids
Theoretical weight: 26.18 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9V9W2 (Residues: 16-243; Coverage: 94%)
Gene names: CG11522, Dmel\CG11522, Dmel_CG11522, RPL6, Rp L6, RpL6, rpl6
Sequence domains:
Large ribosomal subunit protein eL8 Chain: CG
Molecule details ›
Chain: CG
Length: 241 amino acids
Theoretical weight: 27.52 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P46223 (Residues: 31-271; Coverage: 89%)
Gene names: CG3314, RpL7A, SURF-3
Sequence domains: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Large ribosomal subunit protein uL1 Chain: Cz
Molecule details ›
Chain: Cz
Length: 217 amino acids
Theoretical weight: 24.32 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9VTP4 (Residues: 1-217; Coverage: 100%)
Gene names: CG7283, RpL10Ab
Sequence domains: Ribosomal protein L1p/L10e family
Small ribosomal subunit protein eS4 Chain: AE
Molecule details ›
Chain: AE
Length: 261 amino acids
Theoretical weight: 29.19 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P41042 (Residues: 1-261; Coverage: 100%)
Gene names: CG11276, RP4, RpS4
Sequence domains:
Small ribosomal subunit protein eS6 Chain: AG
Molecule details ›
Chain: AG
Length: 231 amino acids
Theoretical weight: 26.64 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P29327 (Residues: 1-231; Coverage: 93%)
Gene names: CG10944, RpS6, hen, l(1)air8
Sequence domains: Ribosomal protein S6e
Small ribosomal subunit protein eS7 Chain: AH
Molecule details ›
Chain: AH
Length: 194 amino acids
Theoretical weight: 22.21 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9VA91 (Residues: 1-194; Coverage: 100%)
Gene names: CG1883, RpS7
Sequence domains: Ribosomal protein S7e
Small ribosomal subunit protein eS8 Chain: AI
Molecule details ›
Chain: AI
Length: 207 amino acids
Theoretical weight: 23.68 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q8MLY8 (Residues: 2-208; Coverage: 100%)
Gene names: CG7808, RpS8
Sequence domains: Ribosomal protein S8e
Small ribosomal subunit protein uS9 Chain: AQ
Molecule details ›
Chain: AQ
Length: 148 amino acids
Theoretical weight: 16.81 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9W237 (Residues: 1-148; Coverage: 100%)
Gene names: CG4046, RpS16
Sequence domains: Ribosomal protein S9/S16
Large ribosomal subunit protein uL13 Chain: CO
Molecule details ›
Chain: CO
Length: 205 amino acids
Theoretical weight: 23.7 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9VNE9 (Residues: 1-205; Coverage: 100%)
Gene names: CG1475, RpL13A
Sequence domains: Ribosomal protein L13
Large ribosomal subunit protein eL13 Chain: CL
Molecule details ›
Chain: CL
Length: 210 amino acids
Theoretical weight: 24.08 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P41126 (Residues: 2-211; Coverage: 96%)
Gene names: CG4651, RpL13, bbc1
Sequence domains: Ribosomal protein L13e
Large ribosomal subunit protein uL14 Chain: CV
Molecule details ›
Chain: CV
Length: 134 amino acids
Theoretical weight: 14.24 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P48159 (Residues: 7-140; Coverage: 96%)
Gene names: CG3661, RpL17A, RpL23
Sequence domains: Ribosomal protein L14p/L23e
Large ribosomal subunit protein eL14 Chain: CM
Molecule details ›
Chain: CM
Length: 159 amino acids
Theoretical weight: 18.49 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P55841 (Residues: 1-159; Coverage: 96%)
Gene names: CG6253, RpL14
Sequence domains: Ribosomal protein L14
Interferon-related developmental regulator 2 Chain: DA
Molecule details ›
Chain: DA
Length: 370 amino acids
Theoretical weight: 41.41 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9VQI5 (Residues: 49-418; Coverage: 87%)
Gene names: CG15401, CG3098, CG31694, Dmel\CG31694, Dmel_CG31694, Ifrd1, difrd1
Sequence domains:
Small ribosomal subunit protein eS10B Chain: AK
Molecule details ›
Chain: AK
Length: 90 amino acids
Theoretical weight: 10.75 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9VWG3 (Residues: 1-90; Coverage: 56%)
Gene names: CG14206, RpS10, RpS10b
Sequence domains: Plectin/S10 domain
Small ribosomal subunit protein eS19A Chain: AT
Molecule details ›
Chain: AT
Length: 143 amino acids
Theoretical weight: 16.04 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P39018 (Residues: 6-148; Coverage: 92%)
Gene names: CG4464, RpS19, RpS19a
Sequence domains: Ribosomal protein S19e
Small ribosomal subunit protein uS7A Chain: AF
Molecule details ›
Chain: AF
Length: 189 amino acids
Theoretical weight: 21.3 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q24186 (Residues: 40-228; Coverage: 83%)
Gene names: CG8922, M(1)15D, RpS5, RpS5a
Sequence domains: Ribosomal protein S7p/S5e
Small ribosomal subunit protein uS11A Chain: AO
Molecule details ›
Chain: AO
Length: 127 amino acids
Theoretical weight: 13.62 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: C0HKA0 (Residues: 25-151; Coverage: 84%)
Gene names: CG1524, RpS14a
Sequence domains: Ribosomal protein S11
Small ribosomal subunit protein eS28 Chain: Ac
Molecule details ›
Chain: Ac
Length: 62 amino acids
Theoretical weight: 7.11 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9W334 (Residues: 4-65; Coverage: 95%)
Gene names: CG2998, RpS28b
Sequence domains: Ribosomal protein S28e
Small ribosomal subunit protein uS8A Chain: AW
Molecule details ›
Chain: AW
Length: 129 amino acids
Theoretical weight: 14.67 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P48149 (Residues: 2-130; Coverage: 99%)
Gene names: CG2033, RpS15A, RpS15Aa
Sequence domains: Ribosomal protein S8
Large ribosomal subunit protein eL24 Chain: CW
Molecule details ›
Chain: CW
Length: 58 amino acids
Theoretical weight: 6.9 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9VJY6 (Residues: 2-59; Coverage: 37%)
Gene names: CG9282, RpL24
Sequence domains: Ribosomal protein L24e
Large ribosomal subunit protein eL34 Chain: Cg
Molecule details ›
Chain: Cg
Length: 103 amino acids
Theoretical weight: 12.1 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9VHE5 (Residues: 2-104; Coverage: 61%)
Gene names: CG9354, Dmel\CG9354, Dmel_CG9354, L34b, Rp L34b, RpL34, RpL34b, anon-EST:fe1C10, anon-EST:fe1E8
Sequence domains: Ribosomal protein L34e
Large ribosomal subunit protein eL22 Chain: CU
Molecule details ›
Chain: CU
Length: 96 amino acids
Theoretical weight: 11.53 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: E2JE76 (Residues: 194-289; Coverage: 31%)
Sequence domains: Ribosomal L22e protein family
Large ribosomal subunit protein L37-2 Chain: Cj
Molecule details ›
Chain: Cj
Length: 87 amino acids
Theoretical weight: 9.98 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9W1U6 (Residues: 2-88; Coverage: 98%)
Gene names: CG9873, RpL37-2, RpL37b
Sequence domains: Ribosomal protein L37e
Large ribosomal subunit protein uL30 Chain: CF
Molecule details ›
Chain: CF
Length: 223 amino acids
Theoretical weight: 26.47 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P32100 (Residues: 30-252; Coverage: 89%)
Gene names: CG4897, RpL7
Sequence domains:
Large ribosomal subunit protein eL31 Chain: Cd
Molecule details ›
Chain: Cd
Length: 108 amino acids
Theoretical weight: 12.8 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: Q9V597 (Residues: 15-122; Coverage: 87%)
Gene names: CG1821, RpL31
Sequence domains: Ribosomal protein L31e
Small ribosomal subunit protein uS13 Chain: AS
Molecule details ›
Chain: AS
Length: 134 amino acids
Theoretical weight: 15.68 KDa
Source organism: Drosophila melanogaster
UniProt:
  • Canonical: P41094 (Residues: 8-141; Coverage: 88%)
Gene names: CG8900, RpS18
Sequence domains: Ribosomal protein S13/S18
2S ribosomal RNA Chain: A9
Molecule details ›
Chain: A9
Length: 30 nucleotides
Theoretical weight: 9.67 KDa
5S ribosomal RNA Chain: A7
Molecule details ›
Chain: A7
Length: 120 nucleotides
Theoretical weight: 38.63 KDa
Sequence domains: 5S ribosomal RNA
5.8S ribosomal RNA Chain: A8
Molecule details ›
Chain: A8
Length: 123 nucleotides
Theoretical weight: 39.62 KDa
Sequence domains: 5.8S ribosomal RNA
18S Ribosomal RNA Chain: B2
Molecule details ›
Chain: B2
Length: 1995 nucleotides
Theoretical weight: 641.83 KDa
Sequence domains: Eukaryotic small subunit ribosomal RNA
28S ribosomal RNA Chain: A5
Molecule details ›
Chain: A5
Length: 3974 nucleotides
Theoretical weight: 1278.93 KDa
Sequence domains: Eukaryotic large subunit ribosomal RNA

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.5Å
Relevant EMDB volumes: EMD-10622

Quick links

Citations

3 review citations

Ribosome biogenesis and function in development and disease.
Ni et al. (2023)
2 more

1 mention without citation

Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching.
Hopes et al. (2022)