6pk3

X-ray diffraction
2.18Å resolution

Alanine-glyoxylate aminotransferase 1 (AGT1) from Arabidopsis thaliana

Released:

Function and Biology Details

Structure analysis Details

Assemblies composition:
homo tetramer (preferred)
homo dimer
PDBe Complex ID:
PDB-CPX-176400 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Serine--glyoxylate aminotransferase Chains: A, B
Molecule details ›
Chains: A, B
Length: 401 amino acids
Theoretical weight: 44.26 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q56YA5 (Residues: 1-401; Coverage: 100%)
Gene names: AGT1, At2g13360, F14O4.7
Sequence domains: Aminotransferase class-V

Ligands and Environments


Cofactor: Ligand PLP 2 x PLP
2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RUH2R
Spacegroup: P21212
Unit cell:
a: 139.179Å b: 62.289Å c: 97.013Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.142 0.139 0.17
Expression system: Escherichia coli BL21(DE3)