6b23

Electron Microscopy
3.7Å resolution

Capsid protein and C-terminal part of CpmB protein in the Staphylococcus aureus pathogenicity island 1 80alpha-derived procapsid

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:

Structure analysis Details

Assembly composition:
hetero 480-mer (preferred)
PDBe Complex ID:
PDB-CPX-107515 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Major capsid protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 324 amino acids
Theoretical weight: 36.85 KDa
Source organism: Dubowvirus dv80alpha
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A4ZFB3 (Residues: 1-324; Coverage: 100%)
Gene name: gp47
Sequence domains: Phage capsid family
Hypothetical mobile element-associated protein Chains: a, b, c, d
Molecule details ›
Chains: a, b, c, d
Length: 72 amino acids
Theoretical weight: 8.28 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: O54465 (Residues: 1-72; Coverage: 100%)
Gene names: G6W63_08160, GO941_04055, GQX37_02380, NCTC7878_00451, SAMEA70153168_02109
Sequence domains: Pathogenicity island protein gp6 in Staphylococcus

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.7Å
Relevant EMDB volumes: EMD-7035
Expression system: Staphylococcus aureus