5lon

X-ray diffraction
3.5Å resolution

Structure of /K. lactis/ Dcp1-Dcp2 decapping complex.

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-179435 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Nudix hydrolase domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 281 amino acids
Theoretical weight: 32.63 KDa
Source organism: Kluyveromyces lactis NRRL Y-1140
Expression system: Escherichia coli
UniProt:
  • Canonical: Q6CIU1 (Residues: 1-275; Coverage: 34%)
Gene name: KLLA0_F23980g
Sequence domains:
Dcp1 Chain: B
Molecule details ›
Chain: B
Length: 188 amino acids
Theoretical weight: 21.93 KDa
Source organism: Kluyveromyces lactis NRRL Y-1140
Expression system: Escherichia coli
UniProt:
  • Canonical: Q6CPV9 (Residues: 1-188; Coverage: 100%)
Gene name: KLLA0_E01827g
Sequence domains: Dcp1-like decapping family
Structure domains: Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SOLEIL BEAMLINE PROXIMA 2
Spacegroup: I432
Unit cell:
a: 216.685Å b: 216.685Å c: 216.685Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.253 0.25 0.312
Expression system: Escherichia coli